Hippoglossus hippoglossus (Atlantic halibut): 117756358
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Entry
117756358 CDS
T07778
Symbol
mlh3
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117756358 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117756358 (mlh3)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
117756358 (mlh3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
117756358
NCBI-ProteinID:
XP_034432703
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Position
22:13994759..14001930
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AA seq
1189 aa
AA seq
DB search
MDAVIRCLPGEVQEALRSGVSIPSLQQCVEELVLNSIDAGATCVGVRVDMESLKVQVLDN
GAGMSAEDMXRVGNRYHTSKCISLEDLDDLRCYGFRGEALASIFSLSTLVEITSRTRSSV
KTHVKVFKKGEGLCVFEADAARPSAGTTVVVSNFFHSMPVRRKRVDAVLEGERIRHRVEA
ISLMHPSVSVTLRNDCTGAMVVQLSKARDTHHRFAQIHGIERAQKLGAIRHTHGQFEVAG
YVGKEGHYNNSSQFLYVNGRLLLKTRIHKLLNFLLRRLSANQRNGSPDGQSAIRSPKHKR
SQELHGVYIINIKCSYSEYDICLEPAKTLIEMKDWDGILLCMEEAVKAFLSRENLVAVLS
QDDFDSLSPAQFGTDNTSREGNGASTLDHGIGMKLASESVHRARKEDGVCQGSGLLECSD
YKAEKMPANDLETTQREGCVHKDCRDEPRCDLTQPELASDNNITEEEEKPFSNAQILCVS
TSPESENPQFTKRRRKEQQLNDTSSSGNVILPENITQHIQPDLNSTEQLPDCQGAGGHRP
SLSSNRKISLSDPFIHRNLQDQHLSQINKSVFPQQNSAQKAEETSSTSKCKISLVTGHDR
CSRRQCNDFAPVVPSKIPRIGSCQRLSLWNESGSLDKFRRIFGISKESKLSSLETRIENN
SKLPQINRPTLNLQNLLVCQQNQQDDGDAETQRKETQSSFQSLPTLSGFTKLKPHSAQNT
GKKSLAAKLCHLKQHEPVGSKVSVDISGTTSQTCVSGGNDIQDSNNNENPCDTSLNPEPD
SACKAIPQEEDITSGDWLHHYDASVGKTVYVNRVTGLSKYEDPEEETQVRCTSDITNMAV
SVISETGMEYRCYPFQVDLVLPFLSKSRTERVISSGLDGRDDAGENSLSSLYSKWSNPVF
VQPPTVGVDISSGQADGLAVKIHNILFPYRFSKAMIQSMKVIQQVDKKFLACLINTREEE
PAAQTETKENLLVLVDQHAAHERIRLENLVADSYEDDPNAPGERRLRSSNILPPLEINVT
EGELRLLRSCQAHFQNLGLEVTFSEAADTQVFVGKVPLCFVERESNELKRGRPSVIKPIV
EEYLREQIELLRSAGRVRGTLPLTVLKVLASIACHGAIKFNHSLSSVECHCLVSSLSTCK
LPFQCAHGRPSMIPLVDILHLDKDQKELKKPNLQKLRRMHKAWELYGNR
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgtgattaggtgtttgcccggagaggttcaggaggcgcttcgctccggagtc
tccatcccctccctccagcagtgcgtggaggagctcgtcctgaacagcatcgatgccggg
gccacctgtgtgggggtccgggtggacatggagtccctcaaagtgcaggtcctcgacaac
ggcgccggcatgagcgccgaggacatgnagcgtgtgggaaaccgataccacacgagtaaa
tgcatctccctggaagacctggatgacctcaggtgctacgggttcagaggagaagccctg
gcgagtatattttccttatccacacttgtcgagatcacgtcccgcaccagatcgtcggtg
aaaacacacgtgaaggtgttcaagaagggcgaaggtctgtgtgtgttcgaggccgatgct
gctcgaccctctgcgggcaccaccgtcgtcgtcagtaacttcttccacagcatgccggtc
cggaggaagagggtggacgctgtgctggagggagagaggatcagacaccgggtggaggcc
atttctctgatgcatccctcggtgtccgtcaccctgaggaacgactgcaccggggccatg
gtggtgcagctcagcaaagccagggacactcaccacaggtttgcgcagatacacggcatt
gagcgagcacagaaactgggagcaatccgccacacgcacgggcagttcgaagtggccggt
tacgtcggcaaggagggccactacaacaacagctcgcagttcctgtacgtgaatggcaga
ctgctgctgaagacacgcatacacaagttgttgaactttctcctgcgcagactgagcgcg
aatcagagaaacggcagtccggatgggcagtccgccatcaggagtcccaagcataaacgg
agccaagagctgcatggagtttacatcatcaacatcaagtgctcgtactccgagtacgac
atttgtcttgagcctgctaagacgctgatcgagatgaaagattgggatggcattttgctc
tgcatggaagaggcagtgaaggcttttctgagcagggagaacttggttgctgtgctttct
caggatgactttgactctttatcgcctgcacagtttggtacggacaatacatccagagag
ggtaacggtgcttccacactagatcacggtattggaatgaagctggcatccgaatctgtg
catcgtgcgcgcaaagaggacggtgtttgccaggggtctggtctgcttgagtgcagcgac
tacaaggctgagaagatgcctgcaaatgatttggaaacgacacaacgtgaaggatgtgta
cacaaagattgtagagatgagccacggtgtgatttgactcaaccggaacttgcatctgat
aataacatcactgaagaagaggagaaaccgttcagtaacgctcagattttatgtgtttca
acttcaccagagagtgaaaacccccaatttacaaaaagaagaagaaaagagcaacaatta
aatgatacttcctcaagcggcaatgtgattttaccagagaacatcactcaacatattcag
ccggatctaaacagcactgagcagttaccggactgtcagggtgcaggaggacacagacct
tctttaagtagtaacagaaaaatcagcctgtctgatccattcattcatcgaaatctgcag
gatcagcacctgtcccaaatcaacaagtcagtatttccgcagcaaaattcagcacagaaa
gcagaggagacatcatctacatccaagtgcaagatttcactggttacaggccatgaccga
tgctctcgaagacaatgcaacgactttgctcccgtcgttccctcaaagatccccagaatt
ggatcttgtcaaaggttgtctttatggaatgagtctggatctctcgataagtttagaaga
atatttggtatatctaaagaatctaaattatcctctctggagactcgtattgaaaacaat
tcaaagctccctcagataaacagaccaactttgaacctgcagaatttgttggtttgtcag
caaaatcagcaagatgatggtgatgcagagacacagagaaaagagacacagagcagtttc
caaagcttaccaaccctctcaggtttcactaagctgaaaccacactcagctcagaataca
ggcaaaaaatcgttggcggctaaactctgccatttgaaacaacacgagccagtgggttct
aaagtgtcagtggacatctctgggactacctcacagacctgtgtcagtggtggtaatgac
atccaagacagcaataacaacgagaatccctgtgacacttcactgaatcctgaaccagac
tcggcttgtaaggcaatccctcaggaagaggatataacatcaggtgactggctccatcac
tacgatgcatcggtgggaaagacggtttacgtcaacagagtgaccggtcttagcaaatat
gaggacccagaagaagaaactcaagtgcgttgcacatctgatatcaccaatatggccgtt
agtgtcatctctgaaacagggatggagtacaggtgttacccatttcaggtggatctcgtt
ttgcccttcctgtctaaatccaggacagagagagtgattagttcagggcttgatggcaga
gatgatgctggtgagaattcactttcctcgttgtactcaaagtggagtaatcccgtgttc
gtccaacctcccacggtgggcgtggacatatcaagtggacaagcggatgggctggctgta
aagattcacaacatcctgtttccatatcgcttttccaaggccatgattcaatcaatgaag
gttattcaacaagtggataagaagttccttgcgtgtcttatcaatacacgagaggaagaa
cctgcagcacaaactgaaactaaagaaaatctgctggtgctggtggatcaacatgctgct
catgagagaattcgactcgaaaatcttgttgcagattcctatgaagacgacccaaatgca
ccaggggagagacgtctgcgttcgtcaaacattttgccgcctcttgagataaatgtgacg
gaaggggagctcaggctgctgaggtcctgtcaggcacatttccagaatctgggcttggaa
gtgactttctcagaggcagcagatactcaagtgtttgtggggaaggtaccactgtgcttc
gtggaaagggagagtaatgagctcaaacgagggagaccatctgtaattaagcctatagtt
gaggagtatcttcgagagcagattgagttgctccgctcagctggtagagtgagaggaacg
ctgcccctcactgtgcttaaagtgcttgcctccatagcatgccatggtgccatcaaattc
aaccacagcctgagcagcgttgaatgccactgcttggtttcatccttatctacctgcaag
ctgcccttccagtgcgcccatggccgtccctccatgattccacttgttgacatcctccat
ttggacaaagaccagaaggaattaaagaaaccaaatctccaaaagctgagaagaatgcat
aaagcatgggaactatatggcaatagataa
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