Hippoglossus hippoglossus (Atlantic halibut): 117756378
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Entry
117756378 CDS
T07778
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a isoform X1
KO
K09382
paired box protein 1/9
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117756378 (pax1a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117756378 (pax1a)
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GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
Med3
HTH_29
SARAF
HTH_28
WD40
CCDC53
Motif
Other DBs
NCBI-GeneID:
117756378
NCBI-ProteinID:
XP_034432741
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All DBs
Position
22:complement(16990493..16995230)
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AA seq
380 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYEGGKQASAQAGLSYNHIYPYSYPNTMSPKMSSAAGVPVTA
GHMSLSRAWPSAHTVSNILGIRAFMDSTAMAGAEGYPPKMEEWSSVNRAAFPAAHTVNGI
DKSAIDADIKYAQPSSTLSGYVSACAYSPTNQYGVYSGSTGGYVAAGHHHWQPQSQALSH
PGGGMGMHAGEIHSSMAFKHHHAREGDRKPPSPLSKQQQQQQQQQQQQQQQQQQQQQQQQ
QQQHGDMNSVHGLSLPTSSS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggagaggtgaaccagttaggcggcgtgttcgtcaatggacgaccc
ctgcccaacgccatacggttgagaatcgtggagctggctcagctcgggatcaggccctgc
gacatcagcaggcagctccgggtctcgcacggctgcgtgagcaagattttggcgagatac
aacgagacgggctccatcttacccggtgccatcggcgggagcaaaccgcgggtcacgacg
cctaacgtggtgaagaatatcagggaatacaaacaaaacgaccccgggatctttgcgtgg
gagatccgggacaggcttttggcggacggagtttgtgacaagtacaatgtcccgtcggtg
agttcgatcagcaggattttacgcaacaagattgggaatctctcacagcccaaccagtac
gagggcggcaagcaagcgtccgcgcaggccggcctctcctacaaccacatatacccttat
tcctaccccaacaccatgtcgccaaagatgagcagcgctgctggagtaccggtgacggcc
gggcacatgagcttatccagggcctggccttctgcgcacaccgtcagcaacatcctcggc
atacgagccttcatggattccacagccatggctggtgcggagggatatccaccaaaaatg
gaggagtggagtagcgtcaacagagcagctttcccagcggctcacacggtcaacgggatc
gacaagtccgccattgacgccgacataaaatacgctcagccttcctccacgttgtccggt
tatgtctcggcgtgtgcttactctcccaccaaccagtacggggtgtacagcgggtcgacg
ggcggctatgtggccgcgggacaccaccactggcagccgcagagccaggccctgtcccac
ccgggcggcgggatgggcatgcacgcgggggagatccactcatcgatggccttcaagcac
caccatgcccgagaaggagacagaaaaccgcccagtccgctgagcaagcagcagcagcag
cagcagcagcaacagcagcagcagcagcaacagcagcagcagcaacagcagcagcagcag
cagcagcaacatggagacatgaacagtgtgcatggactcagtctccctacctcatcatca
taa
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