Hippoglossus hippoglossus (Atlantic halibut): 117756451
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Entry
117756451 CDS
T07778
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117756451 (ddx21)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117756451 (ddx21)
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117756451 (ddx21)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
Pre-60S particles
Helicases
117756451 (ddx21)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
117756451 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117756451
NCBI-ProteinID:
XP_034432871
LinkDB
All DBs
Position
3:complement(17579982..17589608)
Genome browser
AA seq
755 aa
AA seq
DB search
MPSKIVFDTEDLVQEEEMDTVSEAKALKNKNKEAKKLKKKQQTEEQEEQEDPDCEPPAPK
KKKKKDKLAGHEVNGHDEVTDLNDNINGIETPKKKKTKTNTEGDTEKKKKQKKATVEAAT
NGHSTLNTPVQTPTQTPIPSGEESASDNEKDTETPEQKEGAFSKFRISDVTINKLKARGV
TFLFDIQVKTFNPVFDGEDVIAQARTGTGKTFSFAIPLVEKLQRESLPPTRGRAPKVLVL
TPTRELAIQVARDFKDVANKLFITCFYGGSSYNPQIDAIRNGIDILVGTPGRIKDHLQNS
KLDLSQVKHVILDEVDQMLDMGFAEQVEEILATSYEKDGESNPQTLLFSATCPAWVYQVA
KKYMRPECKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGRHGRSIVFTE
TKKEANELSMNASIKQSTQTLHGDIPQKQREITLKGFRNGTFEVLVATNVAARGLDIPEI
DLVVQCSPPKDVESYIHRSGRTGRAGRPGVCICFYQRKEEDQLRYVENKAGITFRRVGVP
TANDIIKSSSKDAVKFLDSVPVTAIGYFRASAEKLIEEKGAVDALAAALAHISGATSLEQ
RSLLNSDTGFATMTLVCSQEMHNLGYAWRSIKEQLGEDFENHIQRMCFLKGKTGVCFDLP
VDKVKQMQEGWKDGRRWQLSAAEELPDLEEKQHNNRGGDRGFGNGNRGDRGGGFRGGRGR
SFGGNGGRSNGFRNGGGVGAGRGVHKRSFGEAFDY
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaagatcgtatttgacaccgaggatctggtccaggaggaggagatggacacc
gtcagcgaggcgaaagccctgaagaacaagaacaaggaggccaagaagttgaagaagaag
cagcagacggaggaacaagaggagcaggaggacccagactgtgaacctccagcaccaaag
aagaaaaagaaaaaagacaagctggcaggtcacgaagtgaacggccatgatgaggtcaca
gacctgaacgacaacatcaacggtattgaaacaccaaagaagaagaagactaagacaaac
actgaaggagacacagagaaaaagaagaagcaaaagaaagcaaccgtagaggcagcaacc
aatggacattccaccctgaacacccctgttcagacacccacacagacaccgataccatcg
ggtgaagagtcagccagtgacaacgagaaagatacggaaacaccagagcagaaggaaggg
gccttttccaagttcaggatctccgacgttaccatcaataaactgaaagctcggggagtc
actttcctgtttgacattcaggtgaagacatttaatccagtgtttgatggagaagatgta
atcgctcaagctcgaacaggaacaggaaagactttctcctttgccatcccattggtggag
aagcttcagagggaatcattgccgccgaccagaggccgagctcccaaggtcctggtgttg
actccaaccagagagttagcaatccaggtcgctagggacttcaaagatgtcgccaacaaa
cttttcatcacctgtttctacggcggcagctcatacaacccacagattgatgccatccgt
aatggtatcgatattttggttggaacccctggtcgtatcaaggaccacctccagaacagc
aagcttgacctgtcacaggtgaagcacgtcattctggatgaagttgaccaaatgttggac
atgggatttgcggaacaggttgaagaaattttggctacatcatatgagaaagacggcgaa
tccaatccccagacgctgctgttttcagccacctgccccgcctgggtctaccaagtggcc
aagaaatacatgagaccagaatgcaaacatgttgacctgatcggcaagaaaacacagaaa
gctgcaacaactgtggagcatcttgccatcgcctgtcactggtcacagcgcgcagccgtg
atcggtgatgtcatccaggtttacagtggcagacacggccgaagcatcgtgttcactgag
acaaagaaagaggccaacgaactctccatgaacgcatccatcaaacaaagtacacagacc
ctccatggtgatattcctcagaaacagagagagattaccctgaagggcttcaggaatggg
accttcgaggtcctggttgccaccaatgttgcagctcgtggattagatatccctgaaatc
gacctggtggtccagtgctctccacccaaggatgtggagtcatacatccatcgttcagga
cgtacaggccgagcaggcaggcctggagtctgcatctgtttctaccagaggaaagaggaa
gaccagctgcgctacgtagaaaacaaagcaggtatcacattcagacgagttggcgttccc
actgccaatgatatcatcaagtcatcaagcaaggatgctgtcaagtttttggactcagtt
ccggtcacagctattggatactttagagcttcagctgagaagctgatcgaggagaaagga
gccgtcgatgcactcgctgctgcccttgcccacatctctggagccacaagtctggagcag
aggtcactgctgaactctgatactggtttcgccaccatgacgttggtgtgttctcaggag
atgcataatctgggttacgcttggagaagcatcaaagaacaacttggcgaagactttgag
aaccacattcaaagaatgtgcttccttaaaggcaaaacgggagtttgtttcgacctccca
gttgacaaagtcaagcagatgcaggagggctggaaggatggtcgccgttggcaactgtcc
gccgccgaggagctcccagatctggaggagaagcagcacaataaccgcggcggcgacaga
ggctttggcaacggtaaccgtggcgacagaggaggaggattcagaggcggaaggggacgt
agtttcgggggaaatggcggccgcagcaacggatttaggaacggtggcggcgtcggcgcc
ggcagaggagtacacaaacgcagcttcggcgaagcttttgattactga
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