Hippoglossus hippoglossus (Atlantic halibut): 117756595
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Entry
117756595 CDS
T07778
Name
(RefSeq) probable histone deacetylase 1-B
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
hhip03083
Polycomb repressive complex
hhip04110
Cell cycle
hhip04330
Notch signaling pathway
hhip04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117756595
03083 Polycomb repressive complex
117756595
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117756595
04350 TGF-beta signaling pathway
117756595
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117756595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117756595
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117756595
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
117756595
HDAC complexes
Sin3A-HDAC complex
117756595
BRAF-HDAC complex
117756595
REST complex
117756595
SHIP complex
117756595
MiDAC complex
117756595
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
117756595
Heterochromatin formation proteins
Other heterochromatin formation proteins
117756595
Chromatin remodeling factors
NuRD complex
117756595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
117756595
NCBI-ProteinID:
XP_034433052
LinkDB
All DBs
Position
22:complement(17366154..17394255)
Genome browser
AA seq
490 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
SGEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSGGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFRPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEEEDPNKRISIRAHDKRIACEEE
FSDSEDEGEGGRRNATSFKKAKRAKTEGEKEGEEKEKKGEEETKEVKTEEKVPEEEKMDT
SKPKEESKTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcacttcccagggaacaaagaaaaaagtttgctactactatgacggtgatgtt
ggaaattattactatggtcagggccatcccatgaagccccaccgcatccgcatgacacac
aacctgttgctcaactatggcctctacagaaagatggagatataccgtccgcacaaagcc
agcggagaggagatgaccaagtatcacagcgacgactacatcaaattcctgcgttcaatc
cgacctgacaacatgtctgagtacagcaaacaaatgcagagatttaatgttggggaggac
tgtccggtgttcgacggtttatttgagttctgccagctctcaggggggggctctgtcgcc
ggtgctgtaaagttgaacaaacagcagacagacatcgccatcaactgggctgggggcctg
catcacgccaaaaagtctgaggcttctgggttttgctatgtcaacgacattgtcctggct
attttggaattactgaagtaccaccagagagttctgtacatagatattgacatccatcat
ggcgacggtgtggaggaggccttctacaccacagaccgtgtaatgaccgtttccttccat
aagtatggagagtacttccctggcacaggagatctgagggacatcggagctgggaagggt
aaatactacgctgtaaattatccactgagggacggaattgatgatgagtcatatgaagcc
atattcagacctatcatggccaaggtgatggagatgtaccagcccagtgctgtggttctg
cagtgtggagccgattccttgtcaggagacagactcggctgctttaacctcaccattaaa
ggccatgctaagtgtgtggagtacatgaaaagcttcaacctgcccctgttgatgttgggt
gggggaggctacaccatccgtaacgtggcacgctgctggacgtatgaaactgctgtagcc
ctggactcctccatccccaatgagctcccatacaacgactactttgagtactttgggccg
gacttcaagctgcacatcagcccctccaacatgaccaaccagaacaccaacgactacctg
gagaagatcaagcagcgcttgtttgagaacttgcgaatgctgcctcacgccccaggagtc
cagatgcaggccatcccagaggacgctgtacaggaggatagtggcgacgaggaggaagaa
gaccccaacaaacgcatctccatccgtgctcatgacaagaggatagcgtgtgaggaggag
ttctctgactctgaggatgaaggcgaaggaggccgcagaaacgcaaccagcttcaagaaa
gccaagcgagccaaaacagagggagagaaagagggagaagaaaaggagaagaaaggtgag
gaggaaacgaaagaagtgaaaacagaggagaaagtgccagaggaggagaaaatggataca
tcaaagccaaaagaggaatccaagaccccttga
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