Hippoglossus hippoglossus (Atlantic halibut): 117756676
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Entry
117756676 CDS
T07778
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117756676 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117756676 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117756676 (srsf5a)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
SR proteins
117756676 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CoV_nucleocap
CDC45
Motif
Other DBs
NCBI-GeneID:
117756676
NCBI-ProteinID:
XP_034433237
LinkDB
All DBs
Position
22:complement(4734399..4741037)
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AA seq
314 aa
AA seq
DB search
MAENNMSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVY
ELNGKELCSERVTIEHARSRRGRGGGPGMGRFSSGSSGGGGGGGGGGGGGGRGSSDGGGG
YRPSRSSGSRYGPPVRTDHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVV
EFASRSDMKNAISKLDGTELNGRKLKIFEDSRSRSKSRSRSRSYSRSKSRSRSRNRSRSR
SRSLSRTPEKKSSGGSKGAARSPSRSKSRSKSRSRSRSRSPAPAQKKQSRSRSRSRSRSR
SRSRSRSASADSKH
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacaacatgagtggctgtcgtgtcttcatcggccgtttgagcccacacgcc
cgagaaagagacgtggagaagtttttcaagggatatggacggattcgggagatcaacttg
aagaatggatttggcttcgtggaatttgacgaccatagagatgcagatgatgctgtgtac
gaattgaatggcaaggagttgtgcagtgaaagggtcactatcgagcatgctcgctccaga
cgaggaagaggtggcggccctggaatgggacgtttcagtagcggcagcagtgggggtgga
ggtggaggtggtggtggtggaggaggtggtggccgcggcagcagcgatggtggcggcggc
tatcgcccatctcgcagcagtggatccaggtacggccctcctgtgcggacggaccacagg
ctcattgtagagaacctctcttcacggatcagctggcaggacctgaaagacctgatgaga
aaagcaggtgaagttacctttgtggacgctcacagacccaacaaaaacgaaggggtggtt
gagtttgcatctcgcagtgacatgaagaacgccatttccaagctcgatgggacagaactg
aacggacgcaagctgaagatatttgaggacagcagaagtcgcagcaagagccgttcccgc
tcccgcagctactctcgctccaagagccgctcccgcagccgcaaccgctccaggagccgc
tccaggtctctcagccgcaccccagagaagaagtcgtcaggtgggagcaagggcgcagcc
agatccccctccaggtccaagtctcgctccaagtcccgctccaggtctcgctcacgctcg
ccggccccggctcagaagaaacagtctcgctcccgttctcgctctcggtcccggtcccgc
tcccgttcacgctctcgctccgcctcagcagacagcaagcactga
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