Hippoglossus hippoglossus (Atlantic halibut): 117756693
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Entry
117756693 CDS
T07778
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117756693 (msh4)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117756693 (msh4)
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SSDB
Ortholog
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
117756693
NCBI-ProteinID:
XP_034433270
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All DBs
Position
22:13488591..13496218
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AA seq
935 aa
AA seq
DB search
MLTLDNSTEEVTTGGDASDSGQTWAASPVDRGGLNEATSHGPRSTSSISSGSSRQSLDGG
CSSSGLRATLPPTGPGKLMEELAGQFHHGVAVGRINPSVVATTSDSSSFRSHVGTPRLRR
TPGAAGTHPAQTPLTDHTATSCSSATTPSAASVIVAVVEGRGLARGEIGMASLNLKCPEL
VLCQFADTGTYAKVITKIHILVPLEILMPDTASEKGKGTKLFKLITENFPCVAFTAIQRK
YFNERKGLEYIQQLCAPEFGTVLMEVQAKYYCLAAAAALLKYLEFIQNSVYAAKSLKVSF
KGSEQTTMIDSASATNLELVVNNRDHRSEHSLLGVLNHTKTPGGARRLRSNILEPLVDVD
TINIRLDAVHELLQDEDLFFGLKNAIGHFLDIDQLLSVLVQIPKQETVQVAEAKITHVIQ
LKHTLDLVPRLRMVLKNCNTALLKAYSTSLEDTRFDLILEQIKTVINDDTTYLKGSLNMR
TQKCYAVRPNVNEFLDIARRAYTEIVDDIAGLVNQMGEKYGFPMRTSFSTARGFFIQMKL
EGVVLPGGNLPPEFIKVSKLKNNYGFTTADLMKMNDRCDEALREIFHISYVVICQLLSTV
HEHIHCLYKLSDAVSMLDMLLSLANACTISDYVRPEFTDTLAIKQGRHPILERMAGQQPV
SNNSYISEGSNFVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPADYASFRVADQIFTRI
GVDDDFETNSSTFMLEMKEISYIIHNASDRSLIIIDELGRGTGAEEGIGLCHSVCEFLLG
LKAFTLFATHFLELCQLESLYPNVENQHMEVQHTRSVDTDDESVVYTYLLSRGCSEERHY
GLRAAEMTALPSSLIQEAKIIASNVSQQLLAKHHSDPETQRQRAVYHLATRLLQAARNSR
LDPDSLRMYLKGLRKQYEAELQAAGQPESMDTEEE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctaacattagacaacagcacggaggaggtgacaaccggcggtgacgcctcagacagc
ggacagacctgggcggcgtccccggtggacagaggcggactgaacgaagccacctcacac
ggtccccgctccacctcctccatctcctccggctcatcccgtcagagtttagatggaggc
tgctcgagctccggcctcagagccacactccctccaaccggcccaggtaaactgatggag
gagttagcaggtcagtttcatcatggcgtcgcggtggggaggataaatccatcagtggtt
gcaaccacttcggacagctcctccttccgcagccatgtaggaacacccagactgagaagg
acccctggggccgcaggcacacatcctgcacagacaccacttactgatcacactgcaaca
agttgctcctctgcgacaacaccctctgctgcctctgtgattgtagcagtggttgaaggg
cgtggtttggccaggggagagatcggcatggccagtctcaacttgaaatgtccagagctc
gtactttgtcagtttgcagacactgggacgtatgccaaggtcataaccaagattcacatc
ctggtgcctctggagatactgatgccagacacggcgagtgagaagggaaaagggaccaag
ctgttcaaactcatcactgagaactttccgtgtgttgctttcactgcgatccaaaggaag
tatttcaatgagagaaaaggactggagtacattcagcagctgtgcgctccagaatttggc
accgtcctcatggaagtgcaagctaaatattattgcctggcagctgcagctgctttgctg
aaatacttagagttcatccagaactctgtctatgctgccaagtctcttaaagtgagcttt
aaagggagtgagcagacaaccatgatagactcagcctctgccactaacttggagctggtg
gtcaataacagagaccacaggagcgaacattctcttttaggagtgcttaaccacacaaaa
acccctggtggtgctagaagactacgctccaacattctggagcctctggtcgatgtggac
accattaacatacgactggacgctgtgcatgagctgctacaggacgaggatctcttcttc
ggcctgaaaaatgccatcggtcatttccttgacattgaccagctgctctcggttctcgtc
caaatcccaaagcaggaaacagttcaggttgctgaagcaaagatcacacatgtcattcag
ctgaaacacacattggatctggtgccaaggttaaggatggtgttgaagaactgcaacaca
gctctacttaaagcatacagcacctcactggaagacaccaggtttgacttgatcctagag
cagatcaagacagtgattaatgacgacacgacctacctgaaggggagtctgaacatgcgc
actcagaagtgttacgccgtgcgccccaatgtcaacgagttcctcgacattgcccgcaga
gcctacaccgagatagtggacgacattgccgggctagtgaaccaaatgggggagaaatac
ggctttccaatgcgaaccagcttcagcacagctcgaggattcttcatccagatgaagctt
gaaggtgtggttctgcctggagggaatctgccgccagagttcatcaaggtttccaagctc
aagaacaactacggcttcaccactgcagacctgatgaagatgaacgaccgctgcgatgag
gccctgagggagatctttcatatttcttatgtggtgatatgtcaactgctgagcaccgtc
cacgagcacatccactgtctgtacaagctctctgatgctgtctccatgctggacatgctg
ctgtctctggctaacgcatgcaccatctcagactatgtgcgtccagagttcacagacact
ctggcaataaagcagggtcgtcaccccatactggagcgaatggctggacagcagcctgta
tcgaacaatagttacatctccgagggcagcaactttgtcatcatcactggacccaacatg
agtggcaagtccacctacctcaaacaggtggcgctgtgtcagatcatggctcaaatagga
tctttcgttccggctgactacgcctcttttcgtgttgctgatcagatctttaccagaatt
ggtgtcgacgatgattttgaaactaactcttccaccttcatgttggaaatgaaagaaatc
tcttacatcatccacaatgcaagtgacaggtccctgatcatcatagatgagctgggacgt
ggtaccggtgctgaagagggcattggcctctgtcactcagtgtgtgagttcctcctcggt
ctcaaggcgttcaccctgtttgctacacactttcttgagctgtgtcaactggagtctctt
tacccaaacgtggagaaccagcacatggaggttcagcacacgcgcagtgttgacactgac
gatgagagtgtggtgtacacgtatctgctgagtcgaggatgctccgaggagaggcactat
ggtctgagagcagcagaaatgactgccctcccttcaagtttaatccaagaggcaaagata
atagcctctaatgtcagccagcagctcttggccaaacatcatagtgatccagaaacacag
aggcagagagctgtgtaccacctggccactcgcctcctgcaggctgccaggaactccaga
ctggacccagacagcctgcggatgtatctgaaaggcctgaggaagcagtatgaggcagag
ctgcaggccgcggggcagccagagtcaatggacacagaggaggagtga
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