Hippoglossus hippoglossus (Atlantic halibut): 117756711
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Entry
117756711 CDS
T07778
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117756711 (brf1a)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
117756711 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RRN3
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
117756711
NCBI-ProteinID:
XP_034433348
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All DBs
Position
22:complement(2060050..2132845)
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AA seq
692 aa
AA seq
DB search
MSPRVCPSCGSSDIDVDQSRGDAVCMGCGTVLEDNIIVSEVQFVESGGGGSLAVGQFVSS
ESETRNPSFGDSHIAGIGRASRAQTLQKAKLHINTLGHQLKMNQHCLDTAFNFYRMALTK
HLTNGRKCGHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLVLARELCINAPA
IDPCLYIPRFAQLLEFGEKNHDVAMTAMRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFCRTVKEIVSVVKVCESTLRKRLNEFENTPTSELTIEEFMRVDLDQECDPPCYTDGLKK
KKIQQLEVELKKKMDDVEDEIHVYEDEIDAELESVRPKLRGVYAAYTKEEDPDVKDDVLS
TSSKMSDDGDEEAEEELQAVAKHFGKELGELTLEALLKLEKKRPEEEEEEEEEEEGGVPR
RKGPSLESILGTMPTASTLGLSESISNCIGHQKENDGAADSGELDLSGIDDSEIELYLLD
DREIKIKTALWMAENSDYLKEQKEKEVKIAKEKELGIYKEKKPRGPSKKRAPIRANTADE
AIEKMLEQKKISSKINYDVLKDLNIKPGASPARTVESPKKEPSAAKLTGRNRNPARAPLS
LSTPLSTLGKRLQPFITGQPNKKLAVEQVGSSNPLPVPVGDPAVGVLVESGPVVYDEAAD
EEEEEEEDPCMSAMEMMGSNDYGCDGEYDEGF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgggtgtgtccgagctgcggcagctcggacatcgatgtggaccagtcgcgt
ggcgacgccgtctgcatgggctgcggcaccgtgctggaggacaacatcatcgtgtccgag
gtgcagttcgtggagtcgggcggcggaggctcgctggcggtcgggcagttcgtctcctca
gaatctgaaaccagaaatccgtcctttggagattctcacatcgcaggaatcgggagagcg
tctcgagcgcagactctgcagaaagccaaactgcacatcaacactctgggccaccagctg
aagatgaaccagcactgcttggacacggccttcaacttctaccggatggcgctcaccaaa
catctgaccaacggccgcaagtgcggccacgtcatcgccgcctgcctctacctggtctgc
cgcacggagggaacgccccacatgctgctggatctcagtgatctgctgcaggtgaacgtc
tacgtgttgggaaagaccttcctcgtcctggccagagaactgtgcatcaacgccccggct
atagacccgtgcctctacatcccacgtttcgcccagctgctggagtttggcgagaagaac
cacgacgtcgccatgacggcgatgagactggtgcagaggatgaagagggactggatgcac
acgggacgaaggccgtcgggactctgcggagcagctcttctcgtcgccgctcgcatgcac
gacttctgtcgcacggtgaaagaaatcgtcagcgtcgtgaaagtgtgtgaaagcacgtta
agaaaaagactgaatgagtttgagaacacgcccaccagcgagctgaccatcgaggagttc
atgcgggtggatctggaccaggagtgcgacccgccctgctacacggacggcctgaagaag
aagaagatccagcagctggaggtggagctgaagaaaaagatggacgacgtcgaagatgaa
atccacgtctacgaggatgaaatcgatgccgagctcgagagcgtccgacccaaactgaga
ggagtgtacgctgcttacactaaagaagaagatccagatgtcaaagacgacgtcctctcc
acgtcgtccaagatgtcagatgacggggacgaggaagcggaggaagagcttcaggccgtc
gccaagcacttcggcaaagagctcggcgagctcacgctggaggctctgctgaagctggag
aagaagaggccggaggaggaagaggaggaggaggaggaggaggaggggggtgttccgagg
agaaaaggcccgtcgctggagtccatcctggggacgatgcccacagcctccaccctgggc
ctctccgagtccatcagcaactgcatcggacaccagaaggagaacgatggcgccgctgac
agcggggagctggacctgagtgggatagatgacagcgagatagagctgtacctgctggat
gacagagaaatcaaaatcaagacggcgctctggatggcagagaactccgactacctcaaa
gagcagaaagaaaaggaggtgaagatagcgaaggagaaggagctcgggatctacaaagag
aagaagcccagaggcccttcgaagaaacgggccccgatccgagcgaacaccgccgacgag
gccatcgagaagatgctggagcagaagaagatctcgtccaagatcaactacgacgtcctg
aaggacctcaacatcaaacccggcgccagcccggctcgcacggtcgagtccccgaagaag
gaaccgtctgccgccaagctgacgggacgcaaccgcaatcctgcccgagccccactcagc
ctcagcacaccgctgagcaccctgggaaaaaggttgcagccgttcatcaccggacagccc
aacaagaagctggctgtggagcaggttggctcctccaaccccctgccagtgccggtggga
gaccccgcggtcggagtgctggtggagagcgggccggtcgtctacgatgaggctgctgat
gaggaagaggaggaggaagaggacccctgcatgagcgccatggagatgatgggcagcaac
gattacggctgcgatggagagtacgacgagggattctag
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