Hippoglossus hippoglossus (Atlantic halibut): 117756993
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Entry
117756993 CDS
T07778
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117756993 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117756993 (efl1)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
Pre-60S particles
GTPases
117756993 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
FKBP_C
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117756993
NCBI-ProteinID:
XP_034433565
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All DBs
Position
3:complement(30670671..30776586)
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AA seq
1125 aa
AA seq
DB search
MGHTSLQKIIALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHCTHGDQEYLLNLIDSPGHVDFSSEVSTAVRLCDGAIVVVDAV
EGVCPQTQVVLRQAWLENIRPVLVINKIDRLILELKLSAQEAYTHLQKILEQVNAVTGSL
FTSKVLEERAEKEEEKERDIASGDYVYDCSAGLEEADDSLLYFSPDQGNVVFASAMDGWG
FSIQQFAHIYSQKMGIKAAVLQKTLWGDFYLNAKAKKIMKGAQAKGKKPLFVQLVLDNIW
SLYDAVVTRRDAEKVEKVVTSLGVKVMARDSRHSDPKVLLAAICSQWLPVSQAVLSMVCE
KLPSPLDIAAERVEKLMSVGARRFDSLPKQTQELKRAFLQCSSGENSPVIVFVSKMFAVD
TKALPQNRQRPLTQEELSQRRELARQRHADRMAADQAATESNKELIHTGRVPQEGISTAK
MESLTLKDSKPEEEEEQKETFVAFARVYSGTVKKGQRIFVLGPKYDPAHGLRMLPEGCSA
SDDVCEVPHLSCCTMESIYLLMGRDLEELEEVPAGNILGVGGLQEWVLKSATLSTSPACP
PFTPLNFEATPIVRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGEV
HLQRCLDDLRERFAKIEIIASKPIIPFRETVVRPPKLDMVNEELGKQHKVAIIHQVKEEA
SQGHSSDNLHVDPSGLVTLDTPNRLSTVSVRAIPLPHEVTCLLESSSELIRTLEQVNMSL
REGKSLDVSLRTLEAIAGLKTQLESLLQGRKWRNTVKHIWAFGPRRYGPNILLNSVEGYQ
RPSVWQCLSRGDKVIEAGAQAAFLRDFDNSIISGFQLATLSGPMCEEPLMGVCFSVERWD
IQSSAQSQNHDSVEKGSISPEDLAHHKVERRSETSQAEGTAAGPGHARRRPEANAADCYG
PVSGQLIAAMKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRMYGVLGKREGRVLHEEM
KEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVTGSDPYWVPTTEEEYL
HFGEKADSANQTLKYMNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgggccacaccagcctgcagaagatcatcgcactgcagagaaaccctgcaaacatcagg
aacctgtgcatcctggctcatgtagaccatggcaaaactactcttgccgactgcttagtg
gcaagtaatgggatcatatccagtcgactggctgggaagctgaggtatctggacagcaga
gaggatgaacagatcagaggaatcacaatgaagtccagtgccatctctctgcactgcaca
catggagatcaggagtacttactaaatctgatcgactctccgggtcacgtcgacttctcc
tcggaggtatccactgctgtcaggttgtgtgacggtgccatcgtagttgttgatgctgtc
gagggtgtgtgtccacagacccaagttgtgttgcgtcaagcatggctggagaacatccgg
cctgttctagtcatcaataaaatcgatagactcatcctggagctgaaactcagtgctcag
gaagcctacacccacttgcagaagattctggaacaggtgaatgcagtgacaggttctttg
ttcacgtccaaagtgctagaggagcgagcagagaaagaggaggagaaagagagggatata
gcaagtggtgattatgtttacgactgcagcgctgggctggaggaggcagatgactccctc
ctctacttctctcctgaccaagggaatgtggtgtttgccagcgccatggatggatggggt
ttcagcatccagcagtttgcccacatctacagccagaaaatgggcattaaagcagcagtg
ctgcaaaaaaccctgtggggagatttctacctcaatgcaaaagcaaaaaagatcatgaaa
ggagctcaggccaaaggaaagaagccactgtttgtgcagctcgtgctggataacatttgg
agtttatatgatgcagttgtcactcggagggacgcggagaaggtggagaaggttgtgaca
tcacttggggtaaaggtgatggccagggattctcgtcactctgaccccaaagtcctcttg
gctgccatctgcagccagtggttaccggtatcccaagctgtcctttcaatggtgtgtgag
aagcttcccagtcccttagacatcgcagcagagcgcgtggagaaactgatgagtgttgga
gcacgacggtttgactcattgcccaaacaaactcaggaattaaaaagagcattcctacag
tgttccagtggagaaaattctccagttatcgtctttgtgtccaagatgtttgctgtggac
accaaggccttgcctcagaacagacagagaccgttaacccaggaggaattatcccagcgc
agggagcttgctagacagagacacgctgacaggatggcagctgatcaggcagcaacagag
agcaacaaagagctcatccacacagggcgtgtgccacaggaaggcatcagcacagctaaa
atggagagtctgacattgaaagactcaaagccagaggaggaagaggagcagaaggagacc
tttgtcgcctttgcccgggtctacagcggaacggtcaagaaagggcagagaatatttgtg
ctaggaccaaagtatgaccccgcccacggcctgcgcatgcttccagagggttgcagtgct
tcagacgatgtgtgcgaggtgcctcatttgtcctgttgtactatggaaagcatctatctg
ctgatgggccgagacctagaagagctggaggaggtgcctgcaggaaacatcctgggtgtt
ggaggtctgcaggagtgggtcttgaagtcagccaccctatcaacctcccctgcctgcccc
cccttcaccccactcaactttgaggccacgcccatcgtacgggtagcaatagagcccaaa
catccaagtgagatgccaaagctagtgcgtggaatgcgtttgttgaaccaggcagatccc
tgtgctgaggtactgatccaggaaacaggagaacatgttctggtcactgctggtgaggtt
catctccaacgctgcctggatgacctccgagaacggtttgctaaaattgaaatcatcgca
tccaagcccatcattccattcagggagactgtggtacgtcctcctaaattggatatggtg
aatgaagagctgggaaagcagcacaaagtagccatcattcaccaggtaaaagaagaggcc
tcacagggccattcatcagacaacctccacgtggaccccagtggtctggtgaccctcgat
actcccaacagactgtccactgtcagcgtccgggcaatccccctgccacacgaggtgacc
tgtctgttggagagtagctctgagctgatccggactctggagcaggtcaacatgtccctg
agggaggggaagagtctggatgtcagcctcaggaccctggaagccatcgctggactcaag
acccagctggaaagcctgctgcaggggaggaagtggaggaacaccgtgaagcacatctgg
gcttttggtcctcgcaggtacggccccaacatcctactgaacagtgtggagggctatcag
cggccctcagtgtggcagtgtctgagcaggggagacaaagttatcgaggctggagctcag
gccgcttttctgcgagacttcgacaacagcatcatcagcggcttccaactagcaactctg
tcagggcccatgtgtgaggagcccctaatgggagtttgcttctctgttgagaggtgggac
atccagtcttcagcccaatctcagaatcatgactctgtggagaagggctccatatctcct
gaggatttggcgcaccacaaagtggaaagaagaagtgagacttcacaagcggagggcaca
gcagcagggccgggccatgccagacgcagaccagaggctaacgctgcagactgctacggg
ccggtctccggccagcttatcgctgccatgaaggaggcctgccgtcatgccttccaggct
cagcctcagagactcatggccgccatgtatacctgtgagatcatggccaccgctgaggtg
ttgggccgaatgtatggtgtactggggaaacgtgagggtcgcgtcctccatgaagagatg
aaggaaggcacagatatgttcatcattaaagccgttctgcctgtggctgaaagctttgga
tttgctgacgagatccgcaagaggaccagcggcttggccagtccacagttggtcttcagc
cactgggaggttactggcagtgacccatactgggttcccaccactgaagaagagtacctg
cactttggtgagaaagcagactctgccaaccagacgctcaaatacatgaacgctgtccgc
cgccgtaaaggtctctacgtggaggagaagatagtggagcatgcagagaagcaaagaaca
ctcggcaagaacaagtag
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