Hippoglossus hippoglossus (Atlantic halibut): 117757004
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Entry
117757004 CDS
T07778
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SH3_2
Ank_4
Ank_3
SAM_2
Ank_5
PDZ_6
PDZ
SH3_9
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
117757004
NCBI-ProteinID:
XP_034433582
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All DBs
Position
23:17538423..17565196
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AA seq
1738 aa
AA seq
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MPLSPAADTKHDRPRQQAVTNGNPTGSAVARDDDADDTSPGNSTVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRIYTQTYVDDKQLAKLHTKANLKRFMEHVAQKNVEKLSKWLEKGLDPNFHD
ADTGECPLTLAVQLEESCELIKALRSGGAHLDFRTRDGITALHRAVLCRNSAALTTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGMTDENGWQEIHQACRYGNVQH
LEHLLFYGADMSSQNASGNTALHLCALYNQDSCARVLLFRGANKDIKNYNNQTAFQVAII
AGNFDLAEIIKIHKTSDVVVPFRETPSYTKRRRGGSRTSAGNGLSSPRSLIRSASDNALE
SPASSPGPSLQSLETHHDTHTHSLRRHTRRLSRLSVCSPSAGGHVEASPPPSPPPTPQMR
KRRLYSAVPGRTFIATRSHVPQGPGEIQLHRGERVKVLSIGEGGYWEGSVKGRTGWFPAD
CVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYVIEEKAAVLQKRESEGFG
FVLRGAKAETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRTGDFLIEVNGTDVVKVGH
RQVVSLIRQGGSRLLMKVVSVSRKSESNLIRKKAPPPPKRAPSTSLTLRSKSMTADLEDI
ARRRRYEKLDEMLASGQPEVVLRPRPADDFRAATVKQRPTSRRITQAEINSLFERQGLVP
PSAPEKSTMALPRGMSRTKSFGTPEDDRISALINESRFPRSSSLTDSFIPPPPQTAPPPP
PAASATSPLFLLDSGPPPSFLPPPPPARGEGLTRSSFKPGAEPRLQELSDSPSRSHSHAE
RQRKARSMIILQDTPPSLQPDAQAVAPPHALHTATHTLHTATHTSTLSLHSTSPALGHSP
LSRRRGRPIENPYANVGQQAPPTKPQRRKSPLLKQLPVEELGLGIRDYDLSKLDGGGPGS
PSRAEMYQQQVLSERARVQGRRSSLFLSVEGAGSENQVPPLLTLSHSMDDLGELPPPAPV
LSPSPTPHTFLHPLTGKPLDPSSPLALALAARERALTARTPSPEPRSKHASASTTPIPTP
AASPEGRHKRTPIATPQSSPEPRSKRTTPQTSPEQRTKRTTPQTSPELRHKRITPPLFPD
GQVERPETEGGVTSPAGPSPERWRPTPLPPLASESHSALIDRRRSLTVGSSEEEGGAYTV
TLPPALLSSSDEETREELRRIGLVTPPPAFGCPTAPPPPSSLTLLPRRVGEGGGEGGPDS
LGRRGDEEEGSDERLHDSSSPSSLPPSITLASPPAPASPSSPPATHQSSSSAVTSPSGLK
PRLRSPIGRGRSALRDPLLKQSSDSELLPYTASSSPSSPLCSSPTGGGGRQPRYLFQRRS
KLWGGGDDRGEERRGLSPEEGGGRPAALGGQGLGSAVDLTSRSASALELSGRAGSGLDLV
NRLQLLNKDSHSLGEEPSPLDPGRRSPVGGARCVDRGESKSLFSSLGELHTISQRGYGAS
YTVRPGSRYPVTRRSPSPSPSPSDRSIGLASSPTPCSERPDLSSGRGLTILKSSSLSLPS
EPKEVRFVMRSASARTRSRSPSPSPHASPCPSPVLSGPLLALRPWRQRPLNLWNKYDVGD
WLESVGLAEHRQRFQEHEIEGSHLPALTKEDYVELGVTRLGHRINIERALRQLLDGST
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccggctgctgacaccaaacatgatcgcccgcggcaacaggcggttact
aacggcaacccgacaggctctgctgttgccagggacgacgacgcggatgacacgtcccct
ggaaacagcactgtcgtccgcattggcatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaggagcggctgctgaaggagtaccctctgccccccatcacccccatc
ccctacctggagtttcgttataagaggagaatttacactcagacctacgtggacgataaa
cagctggccaagttacacaccaaggccaatctgaagcgtttcatggaacatgttgctcag
aagaacgtggagaaactttccaaatggctggaaaagggcctggacccaaacttccacgac
gccgacacgggggagtgccccctgacgctggccgtgcagctggaggagagttgcgagctg
attaaagctcttcgcagcggtggagctcatctggacttcaggaccagggacggtatcacc
gctctgcaccgagccgtcctctgcaggaacagcgccgctctcactacgctgctcgacctc
ggtgcgtctccggactacaaggacagcagaggtctcactcctctctaccactctgccatg
gtggggggcgccccctactgctgcgagctgctactgcaggaccatgccaccattgggatg
actgatgagaacgggtggcaggaaatccaccaggcatgtcgctatggtaacgtgcagcac
ttggagcacctgctgttctatggcgctgacatgagttcccagaatgcatcaggaaacacc
gcactgcatctctgtgcgctctacaaccaggacagttgtgcccgagtgctgctgttcaga
ggagcaaacaaggacatcaagaactacaacaaccagacggcctttcaggtggcgatcatt
gctgggaactttgatttggcagaaatcattaaaatccacaaaacctctgatgttgtagta
cccttcagagaaactccctcctacaccaaacgccgccgcggtgggagcaggacgtcggcg
ggaaacggtctctcatctccacgttctctgattcgctcagccagtgacaatgctcttgaa
agccccgcctcctctcctggcccctccctccaaagcctggagactcaccacgacacgcac
acacactcgctacgacgtcacacacggcgactcagtcgtctgtctgtctgcagcccgagc
gccggaggtcatgtggaggccagtcccccgccctcccctcccccgaccccccagatgagg
aagaggaggctgtacagcgccgtaccgggacgcaccttcatcgccacccggtcccacgtc
ccccaggggcctggcgagatccaactgcaccgaggagagagggtgaaagttctgtctata
ggtgagggggggtactgggaaggcagcgttaaaggaagaactggttggtttcctgctgac
tgtgttgaagaagtacagatgagacaatatgaccccagactggagacgagggaggatcgc
accaagagactgttcagacattatactgtaggatcctacgacaactacacctcctacagc
gactacgtgatcgaggagaaggcggccgtgctgcagaagagagagagcgagggattcggc
ttcgtcctcagaggagctaaagctgagacccccatcgaggagttcgccccgacgccggcg
tttcctgctcttcagtacctggagtcagtcgaccaggggggcgtggcttggagggcgggg
ctacggactggagactttctcatagaggtgaacgggacggacgtggtgaaggtgggtcac
cggcaggtcgtctctctgatccgacagggaggaagtcgcctgctgatgaaagtcgtgtct
gtttccaggaaatcagaatccaacctcatcaggaagaaagctccaccccctccaaaacga
gcccccagcacctcgctaacgctccgatccaagtccatgaccgctgacctggaggacatc
gccagaaggagacgctacgagaaactggatgagatgttggccagcggtcaaccggaagtc
gtcctgaggccacgacctgcggacgacttcagagcggcgacggtcaaacagcgaccgacc
agccgacggatcacacaggctgagattaattctctgtttgagcgtcagggtctggttccc
ccctcagccccagagaagagcaccatggctttacccagaggaatgtccagaaccaagagc
tttggcacacctgaggacgacaggatctcagccctgatcaacgagagtcggtttccacgg
agctcctcgctgacggacagcttcatccctccccctcctcagactgctcctccccctcct
cccgccgcctccgccacctccccgctcttcctcctcgactctggacctcccccctccttc
ctcccccctcctccccctgcccggggggaggggctgacccgctccagcttcaagccaggg
gcggagccgaggctgcaggagctctctgactctccgtcgagaagccactcccacgccgag
cgtcagaggaaagcgaggtcgatgatcatcctgcaggacacgcccccgtcgctgcagcct
gatgcacaagccgtcgcccccccgcacgcgctgcacactgccacacacacgcttcacacc
gccacacacacctccacgctctctctccacagcaccagccctgccctcggccactcaccg
ctgtcacgccgcaggggtcgaccaatagaaaacccttatgctaacgtgggacagcaggct
ccacccaccaaaccgcagaggaggaagtcacctttgctgaaacaacttcctgtagaggag
ctaggacttgggatcagagattatgatttgtccaaattagacggaggagggcctggcagc
cccagcagggcggagatgtaccagcagcaggttctttcagagcgcgctcgggtacaaggc
cgccggtcgtctctcttcctgtctgttgagggcgcggggtctgaaaaccaggtgccaccc
ctgctgactttgagccattcgatggacgacctcggtgagcttcctcctcccgccccagtt
ctatcgccttccccgacacctcacaccttcctccacccgctaacgggaaaacctctcgac
ccgtcctccccactcgccctggctcttgcggcacgagaacgagcgctcactgccagaacg
ccgagtcctgagcctcgatctaaacacgcatctgcctccacgacacccatccccacccca
gccgcaagcccagagggcagacataagcgcacccctatcgccacccctcagagcagccct
gagccccgatccaaacgcacaactccacagacgagcccagagcagcgaaccaagcgcacc
actcctcaaaccagccccgagctgaggcataaacgcataaccccgcctctgttccctgat
ggacaggtagaacgtccagagacagagggaggagtaacatcacctgctggcccatctcct
gaacgttggagacccacccccttgccaccactggccagtgagagtcactcagctctgatt
gacaggcgcagaagccttacagtgggcagctcagaggaggagggtggggcttacacagtg
acactcccaccagcattgttgtcgtccagtgatgaggaaactagggaggagctgcgcaga
attggtcttgtgactcctccccctgcctttggctgtcctactgctcctcctcccccatcc
tctcttaccctattaccacggcgagttggggagggagggggagagggcggtcccgactcc
ctgggtagacgaggagatgaggaagaaggaagtgatgaacggctccatgacagctcctcg
cccagttcactccctccctccattaccttggcctcccctccagctccagcttccccctcc
tccccacctgctactcaccaatcttcctcgtctgccgtcacttccccatcaggcctaaag
cctcgtcttcgttcaccaatcggccggggtcgttctgcgcttcgggacccgctgctgaag
caatcatcagacagtgagcttctaccctacactgcatcctcctccccttcttcaccactc
tgttcctcccccaccggtggtggtggtcgacagccacgctacctattccagaggaggtcc
aagctgtggggaggaggggatgaccgcggggaggaacgccggggcctcagcccagaggaa
ggagggggccgtccagcagcactgggaggtcaggggttggggtcggctgtggatctgacc
agtcgctcggcatcagcactggagctgagtggcagggcaggttccggactggatctggtc
aatcggctacagctgctcaacaaagacagtcattctctgggggaggagccgagccctctt
gacccaggccggcggtcaccagtaggaggtgccagatgtgtggacagaggagagagtaaa
tcgttgttctccagtctcggtgaactccacaccatctcccagcgaggatatggcgcaagc
tacacagtccgaccaggaagtcgctaccctgtcacccgccggagcccctccccctctcct
tccccctctgataggtcgatagggctcgcctcctcccccaccccatgttctgaaaggcca
gatctgagctcaggtcgcggtctaaccatcctgaagtcctccagtctaagtctcccctca
gaaccaaaggaggttcgctttgtgatgcgaagtgccagcgcacgaaccaggtcccgttcg
ccttcaccttcaccccacgcctcaccttgcccctccccagtcctcagtggaccgctgttg
gcccttcggccatggaggcagcggcccctcaacctgtggaataaatatgacgtgggtgac
tggctggagagcgtgggtctagctgaacatcgccagcgcttccaggagcacgagattgaa
ggctcccatctccctgccctcaccaaagaggactatgtggagcttggggtcaccagactg
gggcaccggatcaacatcgagagggcactgagacaactgctggatggttccacttga
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integrated database retrieval system
