Hippoglossus hippoglossus (Atlantic halibut): 117757052
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Entry
117757052 CDS
T07778
Symbol
caprin1a
Name
(RefSeq) caprin-1a isoform X1
KO
K18743
caprin-1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117757052 (caprin1a)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117757052 (caprin1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
117757052
NCBI-ProteinID:
XP_034433692
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Position
3:12476409..12484360
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AA seq
636 aa
AA seq
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MPSAMVGNSAVQSVTPDLGNGSQSEAMKQVLGVMDKKVRNMEKKKSKLDDYQAKKNKGES
LNQDQLDALTKYQEITYNLEFARELQKNFMSLGQEIQKAVKKTARREQLQREEMEQRRLK
TVLELQFLLDQLGDDSVRQDLKRPDATGSPLLTDADLTSLDEFYKLVGPDRNYDVRLTDQ
YEEASIHLWELLEGHDKAVAGTTYKSLKDILDKVLLSGYFDRAQTHQNGTCEQEEEQEEQ
TVVAESNAGEQLSEPEGTASEKYTPPIKVETTEFVNRQFIPEASYSNTDKEQVEEWTVEA
QMVNSLQHQSPAQLTPEPAVTMNCDTPPPTADPVVRKQVVQDLMAQMQGTYNFMQESVLE
FDGQALDPAIVSAQPMKPVPTADLQQMSCPSPLSESRLPQTSVVPGPQESSQASMSLSSE
QSPAPCSLSSAFPPVSKPTHTGGINVNAAPFQSVQAVFNMNAPVPPATEGQADPLKQPSQ
FPGGYGQGFSSQPESTVNQPDIPQDTLQSVVGGFQPQEPVMPPAGAHEESTPGAGFGQSG
QSFYNSRAAPRSGPRNARGVMNGYRGSSNGFRGGYEGYRPPFSNAPSSGYGQTQFNTSRD
YSNSTYQREGYQQGYKRGAAQGARGLSRGTAQAMRS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagctatggttggcaacagtgctgtccagtctgtcactccagacctgggaaat
ggaagtcagtctgaggccatgaagcaggttcttggtgtgatggacaagaaggttcgcaac
atggagaagaaaaagtccaaacttgatgactaccaggcaaagaagaataaaggagaaagc
ctgaatcaagatcagttggacgccttgacgaagtaccaagagatcacctacaatcttgag
tttgctcgagaattgcagaaaaacttcatgtcattgggccaagagattcaaaaggcagtg
aaaaagactgcaagacgggaacagctccaacgagaggagatggagcagcggcggctgaag
acggttttggagcttcagtttttactggaccagttgggagatgacagcgtcagacaggac
cttaaacgacctgatgccactggttcccctctgctcactgatgctgacctcacctccctt
gatgagttttacaagctggtgggacctgataggaactatgacgtcaggttgactgaccaa
tatgaagaagcctcaatacacttgtgggaactgcttgagggccatgacaaggctgtggca
gggaccacatataagtcactgaaggacattctggacaaagtgctgctcagtggttacttt
gaccgagcccaaactcatcagaatgggacgtgtgagcaggaagaggaacaagaggagcag
accgtggtggctgagtccaacgctggggagcagctatcagaacctgaaggaacagcgagt
gaaaaatacacccccccaattaaagtggaaaccacagagttcgtaaacagacagttcatt
ccagaagcttcgtacagtaatacagacaaagaacaagtggaggagtggacagtggaggct
cagatggtaaattccctccagcaccagtcccctgcccagctgactccagaaccagctgtt
actatgaactgtgacaccccccctccgaccgctgacccagtggtcagaaagcaggtagtg
caagacctcatggcccagatgcaaggaacctacaacttcatgcaggaatcagtgttagag
tttgacggccaggctctggacccagccattgtgtctgctcagcccatgaagcctgtgccg
actgcggacctgcagcagatgagctgcccttcacccctttcagagtccagacttcctcaa
acaagtgtagtgccgggaccacaggaatcctcacaagcctcgatgtctctttcgtccgag
cagtcccccgccccatgttccctgtcctctgccttcccacctgtctccaagcccacacac
actggaggcatcaatgtcaacgcagcgcccttccagtcagtgcaagcggtatttaatatg
aatgcacctgtacctccagccactgaaggccaagcagaccccctgaagcagcccagtcag
ttccctggtggctatggacagggtttcagcagccagccagagagtactgtcaaccagccg
gacatcccacaggacacattacagtcagttgttggtgggttccagccccaagaaccagtc
atgcctccagcaggagctcatgaagaatctactccaggtgcagggtttggacagtcggga
cagtccttctacaacagccgggccgcgcccaggtccggacccaggaatgctcgaggcgtg
atgaatggataccggggctcctctaatggatttagagggggatatgaaggctaccgccct
cctttctcaaatgctcccagcagcggttatggtcaaacccaatttaacacatctcgggac
tattctaatagcacctaccagcgggagggatatcagcaaggctacaaacggggagccgcc
caaggagctcgaggtttgtctcgaggtaccgctcaagcgatgaggtcctaa
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