Hippoglossus hippoglossus (Atlantic halibut): 117757079
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Entry
117757079 CDS
T07778
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117757079 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117757079 (arid2)
03021 Transcription machinery [BR:
hhip03021
]
117757079 (arid2)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117757079 (arid2)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
ARID
117757079 (arid2)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117757079 (arid2)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
117757079 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
117757079
NCBI-ProteinID:
XP_034433715
LinkDB
All DBs
Position
23:4839202..4874034
Genome browser
AA seq
1629 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFKKIPIVGGKELDLNALYVRVVALGGF
AKVSDKNQWIELGEDFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDEEAQPGNPKT
SLPIGAIPNSYNYQQHVVSDYLRQSYGLSTDFVPPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHSMQLDKDPKLVTLLLAHAGVFDDSLGSFSGVFGIDWKEKTSRDFIRFWKEV
VEDREVRELIWDKSSQPQDGTSCVGRWESLFHPPRRAGISDMEAQRVLQIAVILRNLSFE
ETNVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQDSYREVIMLLTLPDLMLLMASL
EVLYLLAQLGEIPCSKIACVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQASADQAAE
VRPQLVEQVPAPVQGAPAPVTRVPVQSTQTPSGIVELDGEKFTLQWLNAHFETNSEGSVS
RSEMYSEYLATCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDESKANGQVHILLVGLRR
RSIPLPIQLYYQQSPQQHPAAASPAPGDPQAPPSGLTPGLIVGPTFVRALGPKLSPAGAA
PSMALTAQEPPHSSHPTVSRHLVSPQVSPQLPPNPLAMVQQQVRPGPVVQIPMSVSATQN
HSPQQTQQHSPMLPTGTPVTLFQQVPQGHILTTRVQNVCPPIAQHPPLPQTSPFGGASQM
EPASAPSSSIQVGGGQASRVAFQNIAPKPAPNQPGGHASTIASPNQQQAQSVVIVSPNPQ
QSPGYTPAIHQIVLANPSAIPIAQTIQIAGQPGAASSPPISSHSSTQSNQTVSHALSMKR
HQQPPLQIISQAPPSQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPPPNSTIASSP
QVIYQTGYSTQNPSPQPQQLNVQLVPGQLPATGAPALQTVQLLPGQLISTSSPGAPTIIQ
GPTAAGQVTFTVVPNTGFTTSAAVAAVAPVVSPPQFSTGTVPHHNPAAPPTPPPLPAPLR
GDKIICQKEEEAKDATGLHIHERKIEVMENSSLAEGDSSKTSNGDVAAGGKLLNGRKCME
SNLPPYHSGNSQGSLNGPAVESHPANGKQALSPGLNSPLEGNTDPKKTLVNGVCDFDRVD
SAGNLNKNIPNHIASKQYLGNGEVGPSEKSRGSEPPLPSPPLPQQDTAKAQQAERLANGP
QAVGNRLPSELTNGPLMLGHSVLRQQLHPNSSLPPTVTVTSQSLAASPSNGVASEARGLK
RPAESEDRSAAAASSGIPNKVGVRIITITDPNNAGSSATMVAVPAGTDPSTVAKVAIEKA
TQQRNCSATEAAGSTLTVTQSPPPVSQPAPGNHNPRLPAQQTSAAPPEQSRKPGQNFKCL
WQSCKRWFETPSQVFYHAAMTHGGKEVYGGQCLWEGCEPFPRQRLSFVTHLQDKHCSREA
LLAGLKLEEQQAQSPNQTSSQTPPVAGSPPAQRAPKAIVNHPSAALMALRRGSRNLVFRD
FTDEKEGPVTKHIRLTAALTLKNIAKHSDCGRMLVKRHETHLSVLALSNMEVSTTLAKCL
YELTRSLQA
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctactagatcagcggaggaaaggacaggctttcctg
gacgagctgcggcaattccaccagagcagaggatcgccgttcaagaagattcctatcgtg
ggtgggaaagagctggacctgaatgctctctatgtcagagtcgtcgctttaggtggattt
gctaaggtctctgacaaaaaccaatggattgaactcggagaagactttaacttccccagg
agttgctccaacgctgcattcgctttaaaacagtactaccttcgatacttggagaagtat
gagaaagtccaccacttcggcgaggacgatgaagaagcgcagccggggaatcccaaaacc
tctcttccaatcggtgcaattcccaactcttacaactaccagcaacacgttgtatcagac
tatctccgccaaagctatggactgtctacggacttcgttccaccgtgtgactataacaaa
ctggtgctgtcactcctttcgggcctacccaatgaagtggactttgctgttaacgtttgc
actctgctttccaacgagagcaagcactccatgcagctggacaaggatcccaaactggtc
acgttgctgctggcccacgccggcgtcttcgacgactcgctaggcagcttttccggggta
ttcgggatagactggaaggagaaaacctcccgggactttatcaggttctggaaggaggtg
gtggaggacagggaagtcagggagctgatctgggacaagagcagtcaaccgcaagatggt
acgtcgtgcgtcgggcgctgggagagcctcttccacccgccgcggcgggcgggcatcagc
gacatggaggcccagcgggtgctacagattgccgttatcctgcgaaacctctccttcgag
gagaccaacgtcaagctgctagcggccaaccgaacgtgcctgcgcttccttttgctctgt
gcccactgtaacctcatctcactccgacagctcggactggacacgttgggcaacgtggct
gccgagctccagctggatcccgttgactttcggacgactcacctgatctttcacaccatc
accaaatgcttgatgtccagggaccggttcctcaaaatgagagccatggagatcctgggc
aacctcagcaaggccgaggacaacggggtgctaatctgcgagtatgtggaccaggactcg
tacagggaggtaatcatgctcctcaccctgcctgacctcatgctcctcatggcctccttg
gaggtgctgtacctgctggcccagctcggagagattccctgcagcaagatcgcctgcgtc
gaccacagcatagacctgttagtgcgattggtatcggttgaccttcacacgtttggacct
gacgccctaacagcggtgcggctgatcgagcatcaggccagcgctgaccaggcagccgag
gttcggccgcagctggtagagcaggtacctgcccctgtgcagggagcaccagcacctgta
acgagggtcccagttcaatccactcaaacaccatctggtattgttgaactagacggggag
aaattcacactgcagtggctaaacgcacacttcgagacaaactctgagggctccgtgtct
cggtcagaaatgtactcggagtacctggccacgtgcagtaaaatgggacgaagcaacatc
ttgaactccaccggcttcctcaaatgtctgcggactgtgttccccaaccacacgatgcgg
cggcaggatgagtccaaggccaacggccaggttcacatcctcctggtagggctgaggcga
aggtcaatccccctgcccatccagctgtactaccagcagtctccgcagcagcatccggca
gcagcttctccagcacctggagaccctcaggccccaccatcaggcttaactcccggactc
attgttggaccgacgtttgtccgggccctaggacccaaactcagccctgctggtgccgcc
ccctccatggccttgaccgcacaggaacctccccattcaagccacccgactgtttctcgt
cacctggtttccccgcaggtgtctccacagttaccaccaaatcctctggcaatggtgcaa
cagcaggtccgacctggtccagtggtccagattcccatgtcggtatcagccactcagaac
cacagtcctcagcaaacacagcaacactcccccatgctccccaccgggacgccagtcacg
ttatttcagcaggtaccacagggccatatcctcaccaccagggtacaaaatgtgtgccct
ccaattgcccagcatcctcccctgccacaaacctctccctttggtggagcttcccagatg
gagcctgcatcggcgccctcctcttccattcaggtggggggtggacaggcgtcgcgtgtc
gcatttcagaatatcgcacccaaaccagcgccaaaccagcccggtggacatgcatccacg
atagcatctcccaaccagcagcaggcgcagagtgtagtaatagtcagccccaacccccaa
cagagccctggctacacccccgccatacaccagattgttcttgccaacccctccgccatt
cccattgcccagactatccagatagcagggcagcccggagctgcttccagcccccctatt
tcctctcactccagtacccagtccaatcaaactgtcagccacgcactgtccatgaaacgg
catcaacagccaccgctccaaattatttcccaagctccaccctctcaacctacctccact
gagtccagcttgatcaaacagctgctgcttccaaagcgagggccttctacgccgggagga
aagctcatcctaccggctccgcaggtgccccctcccaacagcacgatagcctcaagtcca
caggtcatctaccagacaggctacagcacccagaatccctctcctcagcctcagcagctt
aatgtccagctggttccgggccagctccctgctacaggagctccagccctccagacagtt
cagctcttgccaggccagctaatttccacgagtagcccgggggcgcctaccatcatccag
ggccccacggcagctggacaagtcacattcaccgtggtccccaacactggcttcaccacc
tctgctgctgtcgctgctgtggctcccgtcgtttcccctcctcaattctccactggaact
gtgccccaccacaacccagcagctcccccgaccccaccgccactgccagctcccctcaga
ggagataagattatttgtcaaaaggaggaggaggccaaggatgccacggggcttcacatt
catgaaaggaagatagaggtgatggagaactcctccttggcagaaggagactcttccaaa
accagtaacggcgatgttgcggcaggggggaagctgcttaatggtcggaagtgcatggag
tctaatctacctccataccactcagggaacagccaggggtcgctcaatggcccggcagtg
gagagtcaccctgcgaatgggaagcaggccctctcccccggcctgaacagccctctggag
ggtaacaccgaccccaaaaagactcttgtcaacggagtgtgtgactttgatcgggttgac
agtgctggcaacttaaacaaaaacattccaaatcacatcgcttccaaacagtacttgggg
aacggggaggtgggcccctctgaaaagagtcgtggctctgagcctcctctcccaagtcct
cctctcccccagcaggacactgccaaagcgcagcaggctgagcgcctggctaatggaccc
caggcagtaggcaataggcttccctcggaattaaccaatggacctttgatgctcggccac
tcggtgctaagacagcaactgcaccccaactcctccctcccccccactgttactgttacc
tcccagagtctcgctgcctctccctcaaatggagtggcctctgaggctcgaggcctcaag
aggccagccgagagcgaggaccgcagcgcagcggcagcctcctcggggatccccaataaa
gtgggagtgcggatcatcaccatcactgaccccaacaacgccggcagcagtgccaccatg
gtggcggtgccagcaggaacagacccaagcacagtagccaaagtagcaatagagaaagcc
actcagcagaggaactgctcagcgacggaggcagctggctcaacgctgaccgtcacccaa
tccccgccccctgtatcccagcctgcaccaggtaaccacaaccctcgcctcccagcacag
caaacctctgcagcaccgcctgagcaaagcaggaaaccagggcagaacttcaagtgtctg
tggcagtcctgtaaacggtggtttgagacgccgtctcaggtgttttaccacgcagcaatg
acacacggtggaaaggaagtgtatggaggccagtgtctttgggagggatgtgaacctttt
ccccgacagagactgtcctttgtcacgcatctacaagataagcactgttctcgagaggct
ctgttggctggactcaaattagaagagcaacaggcacaaagtcccaatcagacttcttcc
cagactccaccagtggcaggcagtcctccggcacagcgagcaccgaaagcaatcgtcaat
catccgagcgcagctctcatggccctacgcagaggctctcgaaacctggtcttcagggac
ttcactgatgagaaagagggaccagtgaccaaacacatacgactaactgctgccttaacg
ttaaagaacatcgccaagcactctgactgtggtcgcatgttggtaaagaggcatgagacg
cacctctctgtgctcgcgctaagtaacatggaggtttccaccacgctcgccaaatgcctt
tatgaactgacacgctcgctccaggcttaa
DBGET
integrated database retrieval system
