Hippoglossus hippoglossus (Atlantic halibut): 117757287
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Entry
117757287 CDS
T07778
Symbol
stab2
Name
(RefSeq) stabilin-2 isoform X1
KO
K19013
stabilin-2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117757287 (stab2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117757287 (stab2)
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Hyaluronan
Cell surface receptors
117757287 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
EGF_Teneurin
EGF_TEN
FXa_inhibition
EGF_laminin
Motif
Other DBs
NCBI-GeneID:
117757287
NCBI-ProteinID:
XP_034434172
LinkDB
All DBs
Position
23:18270525..18311286
Genome browser
AA seq
2479 aa
AA seq
DB search
MMMMMMKMSAAAQQNFCSNSTVVRTRTSCHSCSISLLMSCPSRFRQTPRSVAQDCRYYVR
TASLKLPISGCSFECYQQVELKSCCPGYWGPDCVECPDRADRPCSDRGVCSDGLGGNGTC
TCQEGFAGTSCEDCSPGRFGSTCSSECSCVHGLCDSGLKGDGHCTCFSGYKGPNCDQEVP
ECAALRCQQNSRCMEEALTGQLACQCLPGHQKSGDQCLSINPCLQKVCHTYASCVHTGPN
QHLCACNEGYSGDGRVCMAINPCQTKKGGCSAESTQCIYEGPGKSHCECLPGFDNLSNGG
CSLKDVCRPGSCHKNANCSTVGLGRVECTCLQGYVGNGKVCYGDIMQRLNELNTEPGGQW
RGQLSNAIALFGSLSWPLQNLGPFTVFIPINKGFKGTLVRTLLADSSKAKYLCKMHLVAG
VMPFDTLKKTDIFFTLTGKSAEVDSSEGDTQTKIRIHGSRKKGVIIQSDVVASNGMIHVI
NKLMDSVSSTVESNPEENLMKIISDYGKFDKFKSLLEKTQLASILDLPGPITVFAPTSSA
FDAMTDGHLTYLSSTEGHNKLVELLRNHIVPSTALEVYNAVSGPRIVTKANQVLTINVTE
NGQILVNGAAVLESAVEARNGRLYVLDGVLTPPSIEPVLPHRCDIAESKIVRGECVSCLK
IKVLPCSSGVDTGSSRFGCLYMASIGSSPIKVPSTGCSRLCNTTVTTPACCKGFYGPDCH
PCPGGYQTPCSGHGQCMEGITGNGSCGCDPNFGGSRCHFCSRTNKHGPTCDMTCLCAHGQ
CDNRPDSDGRCKVDSCLLGFTGPFCDRQTAACGVQAQFCHAHADCDFSQGTARCVCKPGY
QGDGITCVESDPCAPPLRGRCSMNAKCIRTGPGTRSCQCLTGWREDGDECQSINNCDGPD
AGSCHPNATCIYVGPGQSDCSCKHGYKGNGRDCEAVNPCVTVSGGCHYLASCLLLSSQWT
CVCDEGYVGDGRMCFGSVEQELMVLAETSEFFRWTTDSGVSLSDQNITLLVPSSAAVDKM
SSNDKNFWTTKGNLPSLIRNHMIPGNYPSSSLSTTSTVTSLLKSTFPVSTANELTTVGGA
TITTSDIAATNGLIHIIDKVLVPDRKLSEGLLATLALRPEFSLFRSYLIDYNLTDEIEQG
DEFTVFAPTDAAINDYLKKMSATALDVNTTRYHVVAAERLLKTDLQPGGYKQTLLGFSFQ
LAIVLREGKLLVNDAQINSSNILSGNGVIHGLSAVLKINRNRCDEATYQKVTATCMDCLF
PISKICPNNSIPDKSVRSRKCMFSRMFEGERLLTIGCRPTCLQKNIVQACCGGFFGKHCE
PCPGAQGRPCFGNGACMDGTNGTGVCQCNQGFNGTACETCQSGKYSVHCDQDCGCKNGRC
NEGITGDGTCECDVGWRGILCDEKVESAADELCGSVKCHTSANCVIGPSGPQCLCAAGFQ
GNGTSCQAKDPCVEDNGGCSLYAVCKRTRPGRRACVCNNGYYGDGLVCVEINPCLQGSGG
CHANADCVHVGPNKTSCSCSEGYSGDGQNCHMINLCQKKNGGCHQFARCNMSGPGVRTCT
CKSNFLGDGLKCRGTVGKEILMRKLRDFYLGLMMVEISLKGRGPFTVFPPSSNAFTVDRV
GTSKMKSLSSEKRKEQYATILRSHIVMCHTLLPADLSRPRNLTSLSGLVLSTRSSQGNIF
INDANVTYSDDVSINGIFHEIDKILFPPDINKDSDPNISMNLTDVAERHGYTHFYKLLED
TGVMDLVHDGMYQPLTLFLPSDVVMASLPQQQKDFLFHPDNRIQLVEYLKYHILHSQKIY
AESLIYLDSARTLQGSPLSFICGGTDNIGEIFVNDGKCRIVQRHLIFNGGIAYGIDCLLT
PPSLGGRCDEQTTFELRMSCGFCSASASRCPKGSKLKEIQKCDLPTMFVTKNSGCLSVCT
INVWQPKCCHGYHGRDCLVCPGGVGSSCSNHGNCDDGHLGNGTCTCDAGFGGVACEQCSD
GFFGPTCKACNCSEHGPCDDGRKGTGACLCEAGWSGELCDTEQSHVSVCSPPCSPKAVCT
ENSTCVCRPFYEGDGFTCTVAEMCGVWNGGCAKGAKCSQIGEVVTCTCPKGHSGDGFSCQ
PVDPCVSGDNGGCHEHATCTMTAPGKKRCTCKDNYVGDGVTCEVKQLPISRCLQGNGRCH
QDAKCTDLHFEDATLGVFHLRSDRGQYKLNFSFAQQACGAEGGALATYTQLSYAQEGGLN
MCAAGWLDQARVAYPTTYSNPNCGFGHVGIVDYGVRKNLSESWDVYCYRMKEVRCECQVG
YVGDGLRCTGNLLQVLMSTPTFSNFLTQILNCSQVSLSGKQFVKRLSNLTVQSTLFVPDN
DGLPDNQTLSQWDIEYHLSEGRALPLSELKNGSRIRTRVGSLTILGVSDLLDPSALSSRY
INDRFVTNSDVVASNGIIHVLQGPLKAPPPSPRDACGSQGGDGSGRDAAGGSGGGGRVHR
IQLLQKQQQRIPVPLLQGG
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgaagatgtcagctgctgcacaacagaacttctgctcgaactcg
acggttgtcaggactcggacgtcgtgtcactcgtgcagcatcagtctgttgatgtcgtgt
ccgtcaagattcagacagacgccgcgttccgtcgctcaggactgcaggtactatgtcaga
actgccagtttgaagctgccaatcagcggctgcagcttcgagtgttaccagcaagtggag
ctgaagagctgctgtcctggttactgggggccggactgtgtcgaatgtcctgatcgagcc
gacagaccctgcagcgaccgaggagtctgctctgatggactgggaggaaacggaacctgc
acctgtcaggaggggtttgcaggtacatcatgtgaggactgttctccaggtagatttggt
tccacctgtagttcagagtgttcctgtgttcatggtctctgtgactctggattaaagggt
gatggacactgcacctgtttctctggatacaaaggtccaaactgtgaccaggaggttccg
gagtgtgcggcgctcaggtgtcagcagaactctcgctgtatggaagaagctctgacgggt
cagttagcatgtcagtgtttaccaggtcaccagaagtcaggagatcagtgtttatcaata
aacccgtgtcttcagaaggtctgtcacacctacgcctcctgcgtccacacgggtccaaac
cagcacctgtgcgcctgtaatgagggttacagcggcgatggacgagtctgcatggccatc
aatccatgtcagaccaaaaaaggaggctgctccgctgagtccacgcaatgcatctacgaa
ggaccaggaaagtctcactgtgagtgtcttcctggcttcgacaacctgtcaaacggcggc
tgcagcctgaaggacgtctgtcgaccaggttcctgtcacaagaacgccaactgttcgacc
gtgggcctgggacgagtcgagtgtacctgtctccagggttacgttggtaatggtaaagtg
tgttacggggacatcatgcagcgtctgaatgagctgaacacggaacctggtggacagtgg
aggggtcaactgagcaacgccatcgctctgtttggttctctgtcgtggcctctgcagaac
ctgggtccattcactgttttcatcccaatcaataagggtttcaaaggaacattggtgagg
actctgcttgcagactcatctaaagctaagtacctgtgtaagatgcatctggttgccggg
gtgatgccatttgacactctgaaaaaaaccgacatctttttcaccctgacgggaaaatca
gcagaggtggactcatcggagggggatacccagactaaaattcgtatccatggcagcaga
aagaaaggcgtgattatccagtccgatgtcgtcgcatccaacgggatgatccatgtcatc
aataagctgatggacagtgtctcgtcaaccgtggagagcaatcctgaggagaacctgatg
aagatcatctctgactatggaaagtttgacaagttcaagtctttgttggagaaaactcag
ctggcatccatcttggatcttccagggccgatcactgtcttcgctccgaccagctcagcc
ttcgacgccatgactgacggacacttgacgtacttgagcagcactgagggtcacaacaaa
ctggtggaacttctcaggaaccacatcgtcccgtccaccgcactggaagtctacaatgct
gtttctggccccagaattgtgacgaaggcgaatcaggttctgacgataaacgtgacagaa
aacggtcagatcctggttaacggagcggcggtgttggagtcagcggtggaagcgaggaat
ggacgtctgtatgtgctggatggagttttgactcctccttccatcgaacccgtgctgcct
cacaggtgtgatatcgccgagagcaagatcgtccggggcgagtgtgttagctgcttgaag
atcaaagtgttaccgtgctcatctggagttgacacaggctcatccaggtttggatgtctg
tacatggcttctatcggcagttcgcccatcaaagtcccgtccaccggctgctcccggctc
tgcaatacaactgtaacgacgccagcgtgttgtaaaggtttctatggtcctgactgtcat
ccctgtccaggtggataccagacgccgtgctcaggacacggtcagtgtatggagggcatc
acaggaaacggttcctgtggctgtgatccaaacttcggaggctctcgctgtcacttctgc
tccagaaccaataaacatggaccaacgtgtgacatgacgtgtctctgtgcccacggacag
tgcgacaaccgtccggactcagatggtcgctgtaaagtcgactcgtgtctgctgggcttc
actggtccgttctgcgatcgacagacggcggcgtgcggcgtccaggctcagttctgccac
gcccatgctgactgcgatttcagtcaggggacggccaggtgtgtgtgtaaacctggttac
cagggcgatggtatcacctgtgtggagtccgacccctgcgctccgcctctccgtggccgc
tgcagcatgaacgctaaatgtataaggacaggacctgggactcgctcctgccagtgtctg
acaggatggagggaggacggagacgagtgtcaatcaatcaacaactgtgacggtcctgac
gccggcagctgtcaccctaacgccacctgcatctacgttggtcctggacagagtgactgc
agctgtaaacatggatacaaaggaaacggacgagactgtgaagctgtgaatccgtgtgtc
accgtaagcggaggctgccattacctggcgagctgtctgctgctgtcatctcagtggacg
tgtgtctgtgacgaaggttatgttggagatggccggatgtgtttcgggagcgtggaacag
gagctgatggtgctggccgagacgtccgaattcttcaggtggacgactgactccggtgtg
tctctgtcggatcagaacatcaccctcctggttccatcttctgctgctgtcgacaaaatg
tcttcaaacgacaagaacttctggacgacaaagggaaacctgccgagtctcatcagaaat
cacatgatccctggaaactatccatcttccagcctgagcaccacttccactgtgacctca
cttctcaagagtactttccctgtttctacagccaatgagctcacaactgttggcggcgcc
accatcaccacatccgatattgctgctaccaatggactgatccacattatcgataaggtt
ctggttcccgacaggaagctgagtgaagggctgctggcgacactcgctctgagacccgag
ttctcgctcttcagatcatatctcattgattacaacctgacggacgagatcgaacagggt
gatgaattcaccgtcttcgctccaacagatgccgccatcaacgattacctgaagaaaatg
tctgcaactgctctggatgttaatacgactcgttaccatgtggtggcagcagagcgcctg
ttaaagaccgacctgcagcctggaggttacaagcagacgctgctggggttctctttccag
ctcgccatcgtcctccgagagggaaagctgttagtgaacgacgctcagatcaactcatcc
aacatcttgagcggtaacggcgtgattcacggtctgtcggccgttctcaagatcaacagg
aaccgctgcgatgaagctacgtatcagaaggtcacggcaacatgcatggactgtttgttc
ccaatcagcaaaatctgccccaacaactccatcccagacaaatccgtgcggagcaggaag
tgtatgttcagccgcatgtttgaaggagagcgactgttgaccatcggctgcagacccacc
tgccttcagaagaacattgtccaagcgtgttgtggcgggtttttcgggaagcactgtgag
ccttgtccaggtgcacagggtcggccctgctttggtaacggagcgtgtatggacgggacg
aatggaaccggagtgtgccagtgtaaccaaggttttaacgggacggcgtgtgaaacctgc
cagagtggcaaatatagtgtccactgtgatcaggactgcggatgtaaaaacggacgctgt
aacgaaggcatcacgggcgacgggacgtgtgagtgtgatgtcgggtggcgaggaatcctc
tgtgacgaaaaagtcgagtcggcggctgacgagttgtgcggctcagtgaaatgtcacaca
agtgcaaattgtgtgatcggaccgtccggacctcagtgtctctgcgctgctggtttccag
ggaaacgggacttcctgtcaagctaaagacccgtgtgtggaggataatggcggctgcagt
ctttacgccgtctgtaagaggactcgacctggacgcagggcctgtgtctgtaacaacggt
tactatggagacggactcgtgtgtgttgagataaatccctgtctgcaaggaagcggaggt
tgtcatgccaacgcggactgcgtccacgttggaccgaacaaaacgtcctgttcctgcagt
gagggttactcgggcgacggacagaactgtcacatgatcaacttgtgtcaaaagaaaaat
ggcggctgtcatcagtttgctcgctgtaacatgagcggtccaggtgtccgtacctgcacc
tgcaagtccaacttcctgggagacggactcaaatgcagaggcaccgtgggcaaggaaatc
ctgatgaggaagctgcgagacttttaccttggcctgatgatggtggagatttctctgaaa
ggtcgcggcccgttcaccgtctttccaccgagcagcaacgccttcacagtggacagagtg
ggcaccagcaagatgaaatccctgagttcggagaaacgtaaagaacaatacgccacaatc
ctgcgaagccacatcgtcatgtgtcacacgctgctgcccgccgacctgagtcgaccccga
aacctgacgtctctgtccggactcgtcctgtccaccagatcaagccagggaaatatcttc
atcaacgacgctaacgtgacgtacagcgacgacgtcagcatcaatgggattttccacgag
atcgacaagattctgtttcctccagacatcaacaaagactcagatcccaacatctctatg
aatctgaccgatgtggccgaacgtcatggatacacacacttctacaagctgctcgaggac
acaggcgtgatggacctggtgcatgatgggatgtaccagccgctcacgctcttcctgccg
tcagacgtcgtgatggcgtctctgcctcagcagcagaaggacttcctgttccacccagac
aaccgcattcagctggtggagtacctgaagtaccacatcctgcacagccagaagatttac
gctgaaagtttgatctatctggactcggctcggacgctgcagggttcaccactctccttc
atctgcggagggacagacaacatcggagaaatcttcgttaatgacgggaaatgtcgcata
gttcagagacacctcatctttaatggtgggattgcatacgggatcgactgccttctgact
ccgcccagcctcggaggacgctgtgatgaacagaccacctttgaactccggatgagttgt
ggattttgctcggcctcagcgtctcgctgtccgaaaggctccaaacttaaggagatccag
aagtgtgaccttcccaccatgttcgtcaccaaaaactctggctgtctcagcgtttgcacc
atcaacgtctggcaaccaaagtgttgtcatggttaccacggacgagattgtctggtgtgt
ccaggtggcgtcggctcctcctgtagtaaccatggtaactgtgatgacggtcaccttggc
aacggcacctgtacctgtgacgcaggcttcgggggcgtggcctgcgagcagtgcagtgat
gggttcttcgggcccacctgtaaagcctgtaactgctcagaacacgggccatgtgacgac
ggacgtaaaggtacgggggcgtgtctgtgtgaggcgggctggagcggcgagctatgtgac
actgagcagagtcacgtctctgtgtgttctccaccctgttctcctaaagccgtctgtacg
gaaaacagcacctgcgtctgtcggccattttatgaaggagatggattcacctgcacagtg
gcggagatgtgcggggtctggaatggcggttgtgctaaaggcgctaagtgttctcagata
ggagaggtggtgacctgcacgtgtcctaaaggtcactctggggacgggttcagctgtcag
cccgttgacccctgcgtctctggagacaacggcggctgccatgaacacgccacctgcacc
atgacggctccgggtaagaagaggtgcacgtgtaaagacaattacgtcggcgatggcgtg
acttgtgaggtcaaacagctgccaatcagccgctgtctccaagggaacggacgctgtcat
caagatgccaaatgtacagacctacactttgaagatgcgacgctcggtgtgtttcacctc
cgttcagacagggggcagtacaaactgaacttcagttttgcgcagcaagcgtgcggtgca
gagggaggtgccctggccacgtacacgcagctgtcctatgctcaggagggtgggctcaac
atgtgtgctgccggctggttggaccaggcccgggtggcgtatcctaccacctactcaaac
cccaattgcggcttcggacacgtcggcattgtggactacggagtccgcaagaacctgagc
gagtcgtgggacgtctattgctaccggatgaaagaggtcaggtgtgagtgtcaggtgggt
tacgttggagacgggctcaggtgcacaggaaacctgctgcaggtgctcatgtccactccg
accttctccaacttcctcacgcaaatcttgaactgctcacaggtgtcgttgtcagggaaa
cagtttgtgaagcgtctgagcaacttgacggttcagtccacgctgttcgtacccgacaac
gacggactgcctgacaaccagactctgtctcagtgggacattgagtaccacctgtccgag
gggagggctcttcctctcagcgagctgaagaacgggagtcgaatcaggacaagagtcggg
agtctgacgatccttggagtgtccgatctgctggacccctcagctctgtcgtctcgttac
atcaacgatcgctttgtcaccaactcagacgttgtggcctcaaatgggatcatacatgtt
cttcagggtccactgaaagccccccccccctcgccaagagatgcatgtgggtcacaaggc
ggggatgggagtgggcgtgacgctgctggtggttctggtggcggcgggcgtgtgcatcgg
atacaacttctacaaaaacaacaacaaaggattccagttccactacttcaaggaggatga
DBGET
integrated database retrieval system
