Hippoglossus hippoglossus (Atlantic halibut): 117757315
Help
Entry
117757315 CDS
T07778
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04150
mTOR signaling pathway
hhip04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117757315
04150 mTOR signaling pathway
117757315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117757315
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117757315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
cEGF
ARPP-2
Motif
Other DBs
NCBI-GeneID:
117757315
NCBI-ProteinID:
XP_034434225
LinkDB
All DBs
Position
23:18015183..18033737
Genome browser
AA seq
827 aa
AA seq
DB search
MGVVLRSVLLCSFCFLIRAVPLLLYANRRDLRLVDAAHEKANATVVVGGLEDAAAVDYVY
SHGLIYWSDVSEEAIKRTVFNQSGASTVQTVVQGLASPDGLACDWLGRKLYWTDSETNRI
EVAELDGSLRKVLFWQELDQPRAIALDPERGFMYWTDWGEIPKIERAGMDGTNRSMIIDK
EIYWPNGLTLDYSLQKLYWADAKHNFIHRANLDGSSREVVVKGELPHPFALTLYEDTLFW
TDWNTHSIHSCQKQTGTDQRIVHSDIFSPMDIHVFSPKRQPLLNSPCSLNNGECSHLCLL
SPMKPYYQCACPTGVQLLEDGTTCRDGATRMLLLARRTDLRRISLDTPDFTDIIMQVDDI
RHAIAIDFDPVEGYIYWTDDDVKAIRRSLLDGSDAQFVVTSQVNHPDGIAVDWIARNLYW
TDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLDGL
ERVVMVNTSLGWPNGLALDYDDRKIYWGDAKTDKIEMMNMDGTGRRVLVEDKLPHIFGFT
LLGDFIYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATYVHQSFGTNPCAENNGGC
SHLCLYKPSGVQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIPLT
GVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL
YWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAAMD
GTGRSTLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGNNSI
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgtgctgcggagcgtgttgttgtgtagtttctgtttcctcatcagagccgtg
ccgctgctgctgtatgcaaatcgacgggaccttcggctcgtggacgcggcacacgaaaag
gccaacgccacggtggtggtgggagggctagaagatgccgcggccgtggactacgtctac
tcccacggcctcatctactggagcgacgtgagcgaggaggccatcaaacgcactgtcttc
aaccagtcaggggccagcacggtccagacggtggtgcagggtttggcctccccggacgga
ctggcgtgcgattggttagggaggaaactttactggacggactcagagaccaatcggata
gaggtggcggagctggacgggtctctgaggaaagttttgttctggcaggagctggaccag
ccgagggccatcgctctggatccagaacgagggttcatgtactggacggactggggcgag
atcccaaagatcgagcgggcggggatggacggaaccaatcgatcgatgattattgataag
gagatctactggcccaacggactgacgctggactacagtctacagaagctgtactgggcc
gacgccaaacacaacttcatccaccgcgccaacctggacggttcctccagggaggtggtg
gttaaaggagagctgcctcaccccttcgccctcaccctgtacgaggacactctgttctgg
accgactggaacactcactccatccactcgtgtcagaaacagaccggcaccgaccagagg
atcgtccactcggacatcttctcgcccatggacatccacgtcttcagccccaagagacaa
cccctcttgaactctccctgctcgctgaacaatggagaatgttctcacctctgcctcctg
tctccgatgaagccgtactatcagtgtgcctgtcccaccggagtccagctgctggaggac
gggacgacctgcagagacggtgcaactcggatgctgctgctcgcgcgacgcacagacctg
cggcgaatctccttggacacgccggacttcaccgacatcatcatgcaggtggacgacatc
cgccacgccatcgccatcgacttcgacccggtggagggctacatctactggacggatgac
gacgtgaaggccatccgccgctccctgctggacggcagcgacgcccagttcgtggtcacg
tctcaggtgaaccaccccgacggcatcgcggtcgactggatcgcccgaaatctgtactgg
accgacacaggaacggaccgcattgaggtgacccggctcaacgggaccatgcggaagatc
ctgatctctgaagacctggacgagcccagagccatcgtgctggaccctgtggccggctac
atgtactggaccgactggggcgaggtgccgaagatcgagcgagcagatctggacggactg
gagcgagtggtgatggtgaacacttcgcttggttggcccaacggcctcgcgctcgactac
gacgatcgcaaaatctactggggagacgccaagactgacaagattgagatgatgaacatg
gacgggacgggcagacgggtgctggtggaggacaaacttccgcacatctttggcttcacg
ctgcttggtgacttcatctactggacggactggcagcgtcgcagcatcgagcgcgtccac
aaacgcacggcggagagagagatcatcatcgaccagcttcccgacctcatgggactcaag
gccacatacgtgcaccagtcgttcggtacgaacccgtgtgccgagaacaacggcggctgc
agccacctctgcctctacaagccttcaggcgttcagtgcggctgtcccatcggactcgag
ctcatcgccgacatgaggacctgcatcgtccctgaggccttcctactcttctcccgccac
acggacatccgccgcatctccctggagaccaacaacaacaacgtggccatcccgctcact
ggcgtcaaggaggcgtccgcactcgacttcgacgtcaccgacaaccgcatctactggacg
gacatcactctgaagaccatcagtcgggccttcatgaacggcagcgctctggaacacgtg
gtggagttcggtctggactacccggagggaatggcggtggactggctggggaagaacctg
tactgggccgacaccggcaccaatcgtatcgaagtggccaaactggacgggcagcaccgt
caggtcctggtctggaaggatctggacagtcctcgagctctggctctggatcccgctgaa
ggctacatgtactggaccgagtggggcgggaagccaaagatcgaccgagcggcgatggac
gggacgggtcggagcaccctggtggctgacgtcggccgagccaacgggctcaccatcgac
tacgcagagcggcgcctctactggaccgacctggacactacgctgatcgagtcgtctaac
atgctcggtaacaacagcatttaa
DBGET
integrated database retrieval system
