Hippoglossus hippoglossus (Atlantic halibut): 117757405
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Entry
117757405 CDS
T07778
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117757405 (cbll1)
04131 Membrane trafficking [BR:
hhip04131
]
117757405 (cbll1)
04121 Ubiquitin system [BR:
hhip04121
]
117757405 (cbll1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117757405 (cbll1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117757405 (cbll1)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117757405 (cbll1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117757405 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
117757405
NCBI-ProteinID:
XP_034434433
LinkDB
All DBs
Position
23:3247272..3253939
Genome browser
AA seq
485 aa
AA seq
DB search
MSSQGRYNDLQGSDGSGNLGGPDVRRRIPIKLISKQPIRSKPPPRAQRPSSRPTKSEPGE
NDNFGFKQEDRFDCGAKSGDVFATQRRYPQPLFWDYKLHLIGERDEVPIHFCDKCGLPIQ
LYGRMIPCKHVFCYDCALLHEKKGDKMCPGLTLYSCTDPVQRIEQCQRGSLYMCSVVPGC
KRTYLSQRDLQAHVNHRHLRAAKSSSGRQEPLHLGLSSDVPDRFRVPPPHLSKNHVHLPN
PLQHGGHDPYSQPPPPSAHDAPPPSSALGPETFRIATVTTRKHSNLITVPIQDDSSSSRE
PHSGGLGPGQPPHHHPGDYPGQPPVVSHSHHMMAPPQQHFGPPPPPPPPISHPMQHPPQA
SGTPHMVYNQAPPPPMSTAPPPITPPPGHIMPPYMNHPPPGPPPQHSGPPVNAPPPHHYN
PNSMQQFPEDQGTLSPPFSQPGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQGRY
RPYYQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcaaggccgatacaatgatcttcaaggaagcgacggctctgggaatttgggc
ggcccagatgttcgaagacgaatccccatcaaactcatatccaaacagcccataaggagc
aaacctccgccacgcgcccaaagacccagcagcaggccaactaaaagtgagcccggagaa
aatgataactttggcttcaagcaagaggacaggtttgactgcggtgctaaatctggagat
gtgtttgcaactcagaggagatatccccagccactgttttgggattataagttgcatttg
attggagaaagggatgaagtaccgattcacttctgtgacaaatgtggtctccctatccag
ctgtatgggcggatgatcccctgcaaacatgttttctgctacgactgtgctttgcttcat
gaaaagaaaggagacaagatgtgcccaggcctcaccctctacagctgcacagatccagtg
cagcgcatcgagcagtgccagcgtggttcgctctacatgtgcagtgttgtgccgggatgt
aagcgcacctacctgtcccagcgtgacctgcaggcccatgttaaccaccgccacctgagg
gcagccaagtcgtcctcaggccgccaggagcccttgcacctcggcctgtcatctgacgtc
cctgatcgtttccgtgtgcctccacctcacttatccaagaaccatgttcatctccctaac
ccactccagcatggcggccatgacccctacagccagccacccccgccctctgctcacgat
gccccgcccccatcgtctgctttaggtcctgagacattccgcatcgctacggtaacgact
cggaaacacagcaatctcatcactgtgcccatccaagatgactcctcttcctcccgtgag
ccccactctggtgggctaggccccggtcagccaccccaccaccaccctggggactatccc
ggccagccacctgttgtgtcccactcccaccacatgatggcgccaccgcagcagcacttt
ggccccccgcctccccctcctcctcccatcagccacccaatgcagcatccgccccaggcc
tctgggacgccacacatggtgtacaaccaggcccctcctccccccatgtccacagctcca
ccaccaatcacgcccccaccagggcacattatgcccccttatatgaaccacccgccccca
ggacctccaccacaacacagtggccctcccgtcaacgcccctccacctcatcattacaac
cccaactcaatgcagcagttccctgaagaccagggcaccctcagtcccccgttcagccaa
ccaggagggctcagccctgggatgtggcctgctccgagaggacccccacctccacggatg
cagggtcctcctccccagggccagatgcctggtccacaccacccagatcagggccgctac
cggccgtactatcagtaa
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