Hippoglossus hippoglossus (Atlantic halibut): 117757422
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Entry
117757422 CDS
T07778
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117757422 (mkrn1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117757422 (mkrn1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117757422 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-ANAPC11
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117757422
NCBI-ProteinID:
XP_034434467
LinkDB
All DBs
Position
23:2419180..2437490
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AA seq
429 aa
AA seq
DB search
MAEAAAAASTAASGVTGGWTKHVTCRYFMHGLCKEGENCRYSHDLTSSEPAAMICKFFQK
GNCVFGDRCRFEHCKPAKNEEPPTPQMLPLPSAGPSDPEPSEPTPGTGAQDWVNAAEFVP
GQPYCGRAEQVNGESSGPLIEEFDSDTAQDNKQLRKQLCPYAAVGECRYGINCAYLHGDV
CDMCGLQVLHPTDSNQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEKANPS
ERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDKEDKQ
KLIQKYKDGMGTKSCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNSRNRS
SRRTPLWDIFDERESTDSFDNEDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFHEE
LDDFYEIYL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcagcgtccacggcggcgtcaggagtaacgggaggctggacc
aaacacgtaacctgcagatatttcatgcatggactctgcaaagagggagaaaactgccga
tattcccacgatctgaccagcagcgaacctgcagccatgatttgcaagttcttccagaag
ggaaactgtgtgtttggggaccgttgcaggtttgaacactgtaaaccggcaaaaaacgag
gagccaccaacaccgcagatgctgccgctgccctccgccggcccgtcagacccagaaccc
agtgagccaacacctggcacaggggcacaagactgggtcaacgctgctgagtttgttcca
ggacagccgtactgtggacgggctgagcaagtgaacggggagagctccggcccgctcatc
gaggagttcgacagcgacacggcacaggacaacaaacagctgaggaagcagctctgtccg
tacgccgctgtcggagagtgccgctacggaatcaactgtgcctatctccacggcgacgtc
tgtgatatgtgtggccttcaggtgctccaccccactgacagcaaccagcgctcagagcac
actaaggcgtgcatcgaggcccacgagaaagacatggagatttcgttcgccatccagcgc
agcaaggacatgatgtgcggtgtgtgtatggaggtggtgtttgagaaggccaacccaagc
gagcgccgttttggtatcctctccaactgcagccactgctactgtctaaagtgcattcgc
aagtggaggagtgccaagcagtttgagagcaaaatcatcaagtcttgcccagagtgtcga
atcacgtccaactttgtcatccccagcgagtactgggtggaagataaggaagacaagcag
aaactcatccagaaatacaaggacggcatggggactaaatcgtgtcgatactttgacgag
ggccgcgggacatgccctttcggctcgaattgcttctacaagcacgccttccctgacggg
cgactggaggaagctcaaccccagcgaagacagacgggctcgaacagcagaaaccggagc
tcgaggcgaacaccgctgtgggacatctttgatgagagggaaagcaccgactccttcgac
aacgaggacgaggagatggtgacgttcgagctgagcgagatgctcctcatgctgctcgcc
gcaggaaccgacgacgaggtgacagactcagaggacgaatgggacttgtttcacgaggag
ctggacgatttctatgaaatttacctatag
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