Hippoglossus hippoglossus (Atlantic halibut): 117757502
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Entry
117757502 CDS
T07778
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117757502 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117757502 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hhip00537
]
117757502 (cntn1b)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
Contactins
117757502 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hhip00537
]
Others
117757502 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
117757502
NCBI-ProteinID:
XP_034434607
LinkDB
All DBs
Position
23:9191055..9202922
Genome browser
AA seq
1042 aa
AA seq
DB search
MASAGLLLLALCSSISITEAVLFGEPRIYGDDATGYGPIFEEEPVDVVYSEDSPDNRISM
NCRARSNPPASYRWRRDNWEIKLMEQPDEFYSLVGGNLVITNPRQKKHAGTYVCVAKNIY
GTVISKEARVKFGFLEEFSDEERTPVYIKEGQGAVLLCAPPKAWPKAVTYRWIFNEFPVF
LNTDRRRFVSQQTGNLYISKVEAQDAGNYSCYVSSPITGQSVFSKFIPLIPSPPDEGEER
KYPADIRVKFPDTTAMLASNITLECFALGNPIPYIVWRKVDATDLPATHEISESGAALHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETLNNTQIDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVIACAPTFEF
NPVKKQLLGARDGRVVIECKPRAAPRPRFTWTKDKELLFNNSRISILFDGTLEIFNATKN
DEGTYNCFVENDRGKANSSGYLTITEATSITEAPEDTEVKVGDEVILKCTASYDPMLDIT
FIWAIDFRVIDFDSEWQHYERVMTEDGTGDLRINNVQIWHEGRYTCTAQTVVDNDTAYAD
LKIVGVPGPPGVIRIDEIGDTWVKLLWSKGAEHNSPILYYTIQTRQYWALYEDDWKDAST
SPTVVDGSFEKVEVTDLFPWMEYQFRIIATNEYGSGEASIPSLKIKTWDASPVISPTDVA
GYGGRNGEIVITWTPVEPWYFYGKKFGYIVAFKPHDAYDWWYKTISDPETRRYVHRDTYF
IPTEEDFQVREFQVKVKSFNVKGDGPYSLTKVIYYPRDVPIESPTDVYARPVSSTEALVW
WLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGAHRIFVTAAVNQTRLENMLPDAHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPEPPRMWRYISWTGKWLYVWWDHIQYDWFGDISFPL
YYKVMFRKSGYIYGKVYITGWHFMDFPMPQVGDYELMVRGRYEGGDGPIRKIKILGKASM
ITPNLGLASLVVLALCIVGLEI
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctggtttgctgctcctggccctctgctcctccatctccatcacagaggcg
gttctctttggtgagccaagaatttatggagatgatgcaaccggttatggtcccatcttt
gaggaggagccggtggatgtggtttactctgaggactcacccgacaacagaatctccatg
aactgcagggctcggtcaaacccaccagcttcatacaggtggcgtcgtgataactgggag
atcaagctgatggagcagccagatgagttctacagcctggtgggggggaacctggtcatc
accaaccccagacagaagaagcacgccggcacgtacgtgtgcgtggccaagaacatctac
ggcactgtcattagcaaggaggctagggtcaagtttggatttttggaggagttttctgac
gaggagagaactccagtttacatcaaagaaggacagggagcagttctgctgtgtgcacct
ccaaaagcctggcccaaggcggtgacctaccgctggatcttcaacgagttcccagttttc
ctgaacacagatcgccgccgattcgtttcccagcagacagggaacctgtacatctccaag
gtggaggctcaggatgcaggaaactactcctgctacgtttccagtcccatcaccgggcag
agtgtcttctccaagttcatccccctcatcccttcaccccccgatgagggggaggaaagg
aagtaccctgcagacatcagggtgaagttcccagatactactgccatgttggcctctaat
attacattagagtgctttgctctgggaaatcccatcccttatattgtttggaggaaggtg
gacgccacagacctcccagcaactcacgagatcagtgaatccggagccgcgcttcatttg
tacaatgtgcagtacgaggatgtgggaggatacgagtgcgaagccatcaacactaaaggg
aaggactggcacaaggcctggctctatgtggagtctgccccagagtgggctgagaccctc
aacaacactcagatcgacatcggctccgagcacaccatgcgctgcgtggcctcagggaag
cccttccctttcatccgctggtacaaagacggatatatgtatggtaaaggtgagctgaag
ttttcaagtctgacttttgatgactctgggatgtaccagtgtattgctgagaattactgg
ggcatcaaatatgccaatgccgagctgcgagtcatagcctgcgctcccacatttgagttt
aaccccgtaaagaagcagcttcttggagccagagacggacgagtggtgatcgagtgcaaa
ccccgagcggctcccaggcctcggttcacgtggacaaaggacaaagagctgctctttaac
aattcacgcatttccatcctgtttgatgggactctggagatcttcaatgccaccaaaaat
gatgagggcacctataactgctttgtcgagaacgacagagggaaggccaacagctctggt
tatctcaccattacagaggcgaccagcatcacggaggctcctgaagacactgaggtcaag
gttggcgatgaggtcattctcaagtgcactgcatcatacgaccccatgctggacatcacc
ttcatctgggccatagatttcagagtcatcgactttgactcggagtggcaacactatgaa
cgtgttatgactgaagatggcaccggtgaccttagaataaacaacgtccagatttggcac
gagggtcgttacacctgcacggctcagacggttgtggacaacgatacagcgtacgctgac
ctcaagatcgtaggtgttcctggtccccctggtgtgatccgtattgatgagatcggggac
acgtgggtgaagcttttgtggagtaaaggagcagaacataacagccccattctttactac
accattcagaccaggcagtactgggctctgtatgaggatgactggaaggatgccagcacc
tctccaaccgttgttgacggcagctttgagaaggtagaggtgacggacctgttcccctgg
atggagtatcagttcaggatcatcgccaccaatgagtatggttccggagaggccagcatc
ccctccctcaagatcaaaacctgggatgcttctccagtgatttcacccactgatgtagca
ggctatggaggcagaaatggcgagattgtgattacatggacacctgtggagccgtggtat
ttctacggcaagaagtttggctacattgtcgcgtttaagcctcacgacgcttacgactgg
tggtacaagaccatctcggaccctgagacgaggcgttacgtccacagagacacctatttc
attcccactgaggaagacttccaggtgcgagagtttcaggtgaaggtcaagtcctttaac
gtgaaaggagacggaccgtacagcctcaccaaagtcatctactacccacgagatgtacct
atagagtctccgacagacgtctatgccaggccggtgtcctccactgaagccctggtgtgg
tggttaccagtggtcgatactggaacaggcctgcaacagtacattgagggataccaggtc
aaatactggagaaagtacgatgacccagagccgggagcccatcgcatatttgttacagct
gcagtcaatcagaccaggctggagaacatgctgccagacgcgcactacctcatcgaggtc
cgtgccttcaatggagccggcctcggcccacctggtgaacactgtgagatgttcactaag
agacctccaccaccagagcctcccaggatgtggcgctatatctcttggacaggaaagtgg
ctgtatgtgtggtgggatcacatccagtacgactggttcggcgatatttcattcccactg
tactacaaggtcatgttcagaaagtcaggctacatctacgggaaagtctacatcactggc
tggcacttcatggacttccccatgcctcaggttggcgactatgagctgatggtgcgtggt
cgttatgagggaggagatggaccaatcaggaagattaagattctgggtaaagcatcgatg
atcacacccaatctaggcctggcatctttggtggtgctggcactgtgcattgtgggattg
gaaatttaa
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