Hippoglossus hippoglossus (Atlantic halibut): 117757557
Help
Entry
117757557 CDS
T07778
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117757557 (pwp1)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
90S particles
Other 90S particles
117757557 (pwp1)
Pre-60S particles
Other pre-60S particles
117757557 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
117757557
NCBI-ProteinID:
XP_034434688
LinkDB
All DBs
Position
23:10311207..10316291
Genome browser
AA seq
491 aa
AA seq
DB search
MSAQITCVGWVKRGVSKETPDKVELSKEELERIIAEARQDLGALAAEEEEDDDEGLPAEP
SADEITAEVAEVPKDENEDEKEEDDGLAEYGLDRYDEEDSVTANLGDSLAGLTVFSCNEE
DPYITLKDTDQYEREDFQIKPNDNLILSGRAEKDCCNLEIHIYNSEEESLYVHHDILLPA
YPLCVEWLNFDPTGEGTANYAAVGNMTPQIDVWDLDVVDCLEPVFSLGSKKASKKKKKSK
KGAAEPAEGHTDAVLDLSWNTLTRTVLASGSADNTVILWDLSQGKSATTLRRQTDKVQTI
SFHPFEAQTLIAGSYDKTVVLYDCRSPDTSYRTWRFSGQVERLVWNHFSPCNFLASTEDG
FVYCLDARSDKPVFTLRAHDEEVSGLALSSQIKGCLVTSSADKHVKIWDILGNKPNLVHT
RDMKMGVLFCASCCPDQPFVYAFGGQRDGLRVWNISDVAAVTEVFGSRERLVVNTGIQAS
SSAAAAEMDVS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacagatcacatgtgtgggctgggtgaagagaggcgtctccaaggaaaccccg
gacaaagttgagttgagtaaagaggagctggaacgcatcatcgctgaagccagacaggac
ctgggggctctagcagctgaggaagaagaggatgatgatgaaggtttgcctgcagaaccg
agtgctgatgagatcacagctgaagttgctgaagttccaaaggacgagaacgaagacgaa
aaagaggaagatgatggtctggcggagtacggcctggatagatacgatgaagaagattca
gtgacggctaatcttggcgacagtctggccggactcacagtgttcagctgtaatgaggag
gatccttacatcacccttaaagatacagaccagtatgagcgagaagatttccaaatcaag
cccaacgacaatctcatcctgtcgggcagagccgagaaggactgctgcaacctggagatc
cacatttataactcagaggaggaatctctgtatgtgcatcatgatatcctgctgccagct
tatccactgtgtgtggagtggctcaactttgacccaactggagaaggaacagcaaactac
gccgctgtgggcaacatgactcctcagatagatgtgtgggacctggatgttgtggactgt
ttggagccagttttctctctggggagcaagaaagcatcaaagaagaaaaagaagagcaag
aagggcgcagcagagcctgcggagggacacacagatgcagtgctggatttatcctggaac
acactgaccaggactgtgttggccagtggatcagcagacaacactgttatcttgtgggat
ctgtctcagggcaaatcagccacaactctgcgcagacagactgataaggttcagacgata
tcattccacccgtttgaggcccagactctgatagcaggatcatatgacaagactgtggtc
ctgtacgactgccgcagtccagacaccagctatcgaacctggaggtttagtggtcaagtg
gagcgtctggtctggaaccacttctcaccctgcaacttcctggcgagcacagaagacggc
ttcgtctactgtctggacgcacgctcagataaacctgttttcacactgagggctcatgat
gaagaggtgtcaggtttggccctcagcagccagattaaaggatgtctggtcacatcgtcg
gccgacaaacacgttaaaatttgggacattttgggaaacaaacccaatctggtgcataca
cgggacatgaaaatgggagtgctgttctgtgcatcgtgttgccctgatcagcctttcgtc
tatgcgtttggaggacagagggatggcttgagggtttggaatatcagtgatgttgcagca
gtgactgaggtgtttggtagtcgggagcgcttggtggtgaacacaggaattcaggcctcc
agcagcgcagccgcagcagagatggacgtctcctag
DBGET
integrated database retrieval system
