KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117757637
Entry
117757637         CDS       T07778                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hhip01009]
    117757637 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117757637 (kdm5a)
Enzymes [BR:hhip01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117757637 (kdm5a)
Protein phosphatases and associated proteins [BR:hhip01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117757637 (kdm5a)
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117757637 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S
Other DBs
NCBI-GeneID: 117757637
NCBI-ProteinID: XP_034434831
LinkDB
Position
23:7674833..7693320
AA seq 1747 aa
MSFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVRN
FRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKIRFPHVERKTLDLYQLSKIVSSE
GGFEMVCKEKRWSKVASRMGFPSGKGAGSLLRSHYERILYPYELFQSGATLTGIQRLYDE
GDDGEEVDEGVGDEAVEEEEQDEEEEEEDKDGEGDATQTKDQLLPERRSRRLKSERENKE
PKGLKIFGASPKMVGLEIVSADDGFNKKQRHLKAQAFAIKMRPRKETLEVNFIDLYLCLV
CGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQAV
REYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKEV
GSGFPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLTHINVDISGMKVPWLYVGMCFS
SFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFDSQPDLLHQLVT
IMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGRQC
VAHYRRLHRYCVFSHEELLCKMAADPESLDVELAASVFKEMGDMMVEETKLRHAIREMGV
LSSEQEVFELVPDDERQCYKCKTTCFLSALTCTCSPDRLVCLHHAEDLCDCPLGNKCLRY
RYDLEEFPSMLYGVKTRAQSYDTWAKRVTEALAADQKNKKDLIELKVLLEDAEDRKYPEN
SLFRRLREMVKEAETCSSVAQLLLSRKQRHSGRLRSENTRNRTKLTVDELKAFVDQLFRL
PCIISQARQVKELLENVEDFHERAQAALSDEMPDSSKLQVLLDLGSGLDVELPELPRLKQ
ELQQARWLDEVRVTLADPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSERWE
DKARGCLQARPRHSLVTLESIVLEARNIPAYLPNILALREALQKAKEWTCKVEAIQSGSS
YAYLEQLESLLARGRSIPVRLDPLTQVESQVAAARAWRERTGRTFLKKNSTYTLLQVLSP
RVDIGVYGNSKSKRKRVKELMEKERGGFDPDALSDLEESLEEVRDPSTVVAAFKSKEQKE
VEAIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKTGTQ
KKVGVGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAM
SWQDQARQSLATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHIQ
TFQQSGFSRATSPRQSLDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKSEE
VVSHMWPAATPSFCAEHAYSSASKSCVQNISTPRKQPRKTPLIPRSLEPPVLELSPQAKA
QLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMDKPLKLKLKDAE
KKRKRKLERAEHHHMLMAAAAVGGGQVMGEMRPAKSKELKRVGLELGLGGKPKKKKLKLN
MDKNREMKQLAKRLAKEEKERKRKEKAAAKAEAVREGLEKRKEKKILDIPSKYDWSGAED
SNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVTCEMAENEDYICVDCSRKA
TGATVGMTVEEVAEESVVVLATSIQSLPSSVVASWSHVASAPHLIPTTSHQQLHQQQQQQ
PEPQQGS
NT seq 5244 nt   +upstreamnt  +downstreamnt
atgtcgtttgcggagttcgtccccccgcccgaatgcccggtttttgagcccagttgggag
gatttctcggaccctttaggattcatcaacaagatccgacccattgcagagaaaacgggc
atctgcaagatccgacccccagaggactggcagcctccatttgcctgtgacgtacgcaac
tttcgcttcactcccagggtgcaacggctgaacgagctcgaggcgctcactcgggtcaag
ctcaactttctggatcaaatcgcaaagttctgggagctgcagggatccaagattcgattc
cctcatgtggagagaaagacgttggacctctatcagcttagcaagattgtgtcgtccgag
ggtggctttgagatggtgtgcaaagagaagaggtggtccaaggtggcgagccgaatgggc
tttccatctgggaaaggcgccggctcattgctccgctcccactatgagaggattctttac
ccctacgagctctttcagtctggagccacgcttaccggcatccagaggttgtatgatgag
ggcgatgatggggaggaagtagatgagggagttggtgacgaggcggtggaggaagaggag
caagatgaggaggaggaggaggaggataaagacggggagggtgatgctacgcaaaccaaa
gatcagcttctgcctgagaggcggtccaggcgccttaagtctgagagagaaaacaaggag
ccaaaaggcctgaaaatcttcggcgcaagtcccaagatggtgggcttggagatcgtgtca
gctgatgacggattcaacaagaagcagcgtcacttaaaagcccaggcctttgccatcaaa
atgagacctcgcaaggagacgctggaggtgaactttatcgacctctacctctgccttgtg
tgcggtcgtggcgacgaggaggaccggctcctgctgtgtgacggctgtgacgacagctac
cacaccttctgtctgatcccgcctctgcaggatgtgcccaagggggactggcgctgccct
aagtgtgttgccgaggagtgcagtaagcccagggaggcgtttggcttcgagcaggctgta
agagagtacactctgcagagcttcggagagatggctgaccacttcaagtcggactatttc
aacatgcccgtacacatggttcccacggagctggtggagaaggagttctggcgcctggtc
agcagcatcgaggaagatgtcatcgtggagtacggcgctgacatcagctccaaagaggtg
ggcagcggatttcctgtcagggacggcaagaggaggctgttgggcgacgaagaggagtat
gccaactcgggctggaacctgaacaacatgccggtgctggagcagtcagtgctcacccac
atcaatgtggacatctcaggcatgaaggtaccctggctttacgtgggcatgtgtttctcc
tcgttctgttggcacatcgaggaccactggagttactccatcaacttcttgcactggggt
gagccgaagacgtggtacggcgtgccagcctctgcagcagagcagctggaggccgtgatg
aagaagttggctccagagctgtttgactcgcagccagacctcctccatcagttggtcacc
atcatgaatccgaacgtcctcatggagcacggcgtccctgtgtacaggaccaatcagtgt
gcaggggagtttgtggtgaccttccccagagcctatcacagcggcttcaaccagggctac
aacttcgctgaggctgttaacttctgcactgctgactggttgcctatgggtcgtcagtgt
gtggcccactacaggcgactccaccgctactgcgtcttctcacacgaggagctgctgtgc
aagatggctgcagatccagagagccttgacgtggaactggctgcttctgtcttcaaggaa
atgggagatatgatggtggaggagacaaagctccgacacgccatacgagaaatgggggtg
ctctcctcagaacaagaggtttttgaactggtgcccgatgatgagcgccagtgctacaag
tgtaaaacaacctgttttctgtccgcgctgacttgcacctgcagccccgaccgtctggtt
tgtcttcaccacgcagaagatctgtgcgactgtccgctcggcaacaagtgtctccggtat
cgttatgatctggaggagtttccgtccatgctttatggggtgaagacacgggctcagtcc
tatgacacgtgggcaaagagggtcacagaagccctggctgcagaccagaagaacaagaaa
gatcttattgagctcaaggttttgctggaggacgccgaggacagaaagtatccagagaac
agtctgttccgacgcctcagggagatggtcaaagaggcggagacgtgctcctctgtagct
cagctgctgctcagccgaaagcagaggcacagcggtcgtctgcgttccgagaacactcgt
aaccgcaccaagctgacggtggacgagctcaaggcttttgtggatcagctcttcaggctg
ccctgcatcatcagccaggcccgacaagtcaaagagttactggaaaatgtggaggacttc
catgagcgagcccaggcggcgctgtcggacgagatgcctgactcctcaaagctgcaggtg
ctgttggatctgggcagcgggctggacgttgagctgcctgagcttccgaggctcaaacag
gagctccagcaggcccgctggcttgatgaggttcgcgtcaccctggccgatccccaccgg
gtcaccctggagctgatgaagagactgatcgactccggggtgggtctggctccgcaccac
gccgtggagaaggccatggccgagctacaagagatcctgactgtctcagagagatgggag
gataaggctcgtggctgcctgcaggcaaggcctcgacacagcttggtgaccttggagagc
attgtgctggaagctcgtaacatcccagcatatctgccaaatattttggccctccgagag
gccctacagaaggctaaggagtggacctgcaaggtggaggccatccagagcggcagcagc
tacgcttacctggagcagctggagagtttgctggccaggggtcgctccatccctgtccgg
ctagatccgctcacccaggtagagtctcaggtagcggcagccagagcctggagagagaga
actggtcgcaccttcctcaagaagaactccacatacacgctgctccaggttctcagtcct
cgcgtcgacattggggtgtacggtaacagcaaaagcaagcggaagcgtgtgaaggagctc
atggagaaggagagaggcggctttgaccctgacgcactcagcgacctcgaggaaagcctg
gaggaggtccgagacccttccactgtcgtcgcagccttcaaatccaaagagcagaaagaa
gtggaggccatccactcactccgagctgccaaccttgccaagatggccatggccgaccgc
atcgaggaggtaaagttctgcctgtgtcgaaagacggccagcggcttcatgttgcagtgc
gagctttgtaaggactggttccacggagcgtgcgtgcctctgcctaagacgggaacccag
aagaaagtgggcgtgggctggcagagtaacagcaaagactctaaattcctgtgtccgctg
tgtcagcggtccaggaggccgagactagagacaattctgtcgctgctggtgtcgctgcag
aagctgccggtgcgtctgccagaaggagaggctctccagtgtttgaccgagagggcaatg
agctggcaggaccaagcgcgtcaatctctcgccactgaggagttgtcctcggcactggca
aaactgtctgtgctgagtcagcggatggtggagcaagcggcgagagagaaaacagagaaa
atcatcaacgctgagcttcagaaagctgctgccaaccctgacttacagggccacatccag
actttccagcagtcgggtttcagcagagccacgtcacctcgccagtctttggactacgat
gacgaggagacggactcagacgaggatattagggagacctacggttacgatatgaaggac
ccaggtgaggtgaagccctacctgttctgtgacgaggagattcccgtcaagtccgaggag
gtggtcagtcacatgtggccggctgccacgccctccttctgtgccgagcatgcctactcc
tccgcctccaagtcctgtgtgcaaaacattagcacacccagaaagcagcccaggaagacc
cctctcatccctcgcagcctggagccgccggtgctggagctgtccccgcaggcgaaggcc
cagctggaggagctgatgatgctgggagacctgctggaggtgtccctggatgagacccag
cacatctggaggatcctgcaggccacgcaccccccctctgaggagagattcctgcaggtc
atggagcccgacgattctctgatggacaagcccctgaagctcaagctcaaagatgccgag
aagaagaggaaacggaagctggaaagagccgagcaccaccacatgctgatggccgccgca
gccgtgggcgggggccaggtgatgggagaaatgcgaccggccaagtccaaggaactgaaa
agggtcggcctggagctcggcctgggcgggaaacccaagaaaaagaaactaaagctcaac
atggacaaaaaccgagagatgaagcagctcgccaaacggttagccaaggaggagaaggag
aggaagagaaaggagaaggcggccgccaaggcagaggccgtccgagagggactggagaag
aggaaggagaagaagatcctcgacattccctccaagtacgactggtccggagctgaggac
tccaatgatgagaacgctgtgtgtgcggctaagaactgccagagaccctgtaaagataag
gtggactgggtgcagtgtgacggcggctgcgacgagtggttccaccaggtgtgcgtaggc
gtgacgtgcgaaatggccgagaacgaggactacatctgtgtggactgctcgcgcaaggcc
accggggcgactgtgggcatgaccgtggaggaggtggcggaggagagcgtggttgtgctg
gcgacatccattcagagtctgccctcgtctgtcgtggcctcgtggtctcacgtggcctcg
gcccctcatctaatcccaacaacgtcacaccagcagctccaccagcagcagcagcagcag
ccagagcctcagcaaggcagttag

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