Hippoglossus hippoglossus (Atlantic halibut): 117757638
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Entry
117757638 CDS
T07778
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hhip01001
]
117757638 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117757638 (trim24)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117757638 (trim24)
Protein kinases [BR:
hhip01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
117757638 (trim24)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117757638 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
PML_CC
FemAB_like
PRANC
Motif
Other DBs
NCBI-GeneID:
117757638
NCBI-ProteinID:
XP_034434832
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All DBs
Position
23:7732865..7748156
Genome browser
AA seq
1104 aa
AA seq
DB search
MDEGVDNVDNDDIVIIVENEAESLPAQEERLKQQGTTGLMDTCPSCKLSFHNREPKLLPC
LHSFCKRCLPPPFRSADPRRDSQGQVDNNKPLGAIRCPVCRQECWEMDVLDNFFVKDSAE
MPSSTMEKTSQVCMSCDDNTEATGYCVECVEFLCLTCIEAHQRVKFTRDHTIRQKEEMSP
EAVGLSTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQYL
ENMTQQLQEKRKTIEEVSSCISNGLQQVEENRKSVTNEIKKSICNLIMEINRKGKILVNQ
LEGLTKEHELGLKKQQDDVNSLSRHLDHVISFTKWATASHSGTALLYCKRLILYQIHYLM
RASCNPSIVPQSTVRFQCRSGFWATNVDLGSLTVERGPGRPPIPNHQAPPRAEAAAGGLS
LSAQQRQSTLAQLQMQVDKLSQQSHRQPPPNHWSWYQNVRLPGPPCPPPPPTRPVHGGSS
PSQGPLGLPQPGRRYGSSHPNTRSPTSSMLHNTGFTPAQSLRDLINSSSFPPKPGDVLQG
TSRYPQPLSAGAATQMSLHQRGMPESSFLKRSEASATVPSISISIPKPSYVPNLASASTD
KTITLNHMTVQGRQNSPMAKPSSSDRSTGTSSWKQSSEPPSAPSAKRRRRTSPGPIIIIK
DEPEDEDEVHFVQSSVGSSLPDSSTGAQSNPRLQQKVSVPNLVPGSESNTGKEQCPQPVA
QPESVKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHIPTLNESPSGEWFCSFC
RDLVSPEMVYDSDRKDEVVSDGFSPVNRRSCERLLLRLFCNDFSTDFQQPASPSETKRYK
ELIKTPIDLSIVKRRLESKSQDGEYYMCLEGFVADVRLIFFNCAKYYKVTSEVGSAGVYL
EEYFEEQLKLAYPDKIFPGGREEQMIPPLEDEIDEDEEMMTENVEPMEDDKPQSPAGQGI
PPVEEDLAPLEEAPSAEEEEKLETEEKATNTSKEEKEKETEETETEEKETEEKETEEKET
EEKETEEKVAAAEDATSLTEEVEKDEKTPVKEVKSPLAADSDTKDGVAPCSPEEDNPYLP
AEKTVDAAETQEEEAADTAKEESA
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggcgtcgataatgtcgacaacgacgacattgtcatcatcgtggagaacgag
gcggaaagtttgccagcccaggaggagaggctcaagcagcagggcaccaccgggctcatg
gacacttgtcccagctgcaagttgagcttccacaacagggagcccaagctgctgccgtgc
ctccactccttctgcaagaggtgtctgccgccccccttcaggagcgccgacccgaggcgg
gactcccaggggcaggtcgacaacaacaaaccactgggcgccattcgctgtccggtatgc
agacaggaatgctgggagatggacgtgctggataatttctttgtcaaggactctgctgag
atgccgagcagcactatggagaaaaccagccaggtgtgtatgagctgcgatgacaacaca
gaagcaacaggttactgtgtggagtgtgtggagtttctgtgcttgacgtgcattgaggcg
caccaacgggtcaagttcaccagggatcacaccatacgacagaaggaggagatgtctcca
gaagcagttggcctttccacacagaaacccgtgttttgtgacatccacaagcaggagccc
ctgaagctgttctgtgagacgtgtgaccgactcacctgtcgagactgtcagctgcttaag
cacaaggatcataactaccagtttttggaggatgcttacagaaaccacaggcagtacctg
gagaacatgacgcagcagttacaagagaaacgaaaaaccattgaagaagtgtccagctgt
atcagcaacggacttcaacaagttgaggaaaaccgtaagtctgtaacgaatgaaataaag
aagtccatctgtaacttgatcatggagatcaacaggaaggggaagattctggttaaccag
cttgagggtctaactaaagaacacgagctgggtttgaaaaagcaacaagacgacgtcaac
tctctgagtcggcacctcgatcatgtaataagctttacaaaatgggccacagccagccac
agtggaacagctctgctgtactgcaagagactgatcctttaccagatccattacctgatg
agagcaagctgtaatccctccatcgtccctcagagtactgttcgcttccagtgtcgctcc
ggtttctgggccactaacgtagaccttggttctctgacggtagaaaggggcccgggacga
ccgcccatccccaaccaccaagctcctcccagagcagaggcggccgctggaggtctgtcg
ctctccgctcagcagcgtcagagcacgctggcccagctccagatgcaggttgacaagctt
tcccaacagtcccacagacagccccctcccaaccactggtcctggtaccagaacgtcagg
ctcccgggacccccttgcccaccgccgccgccgaccaggcccgtccacggaggatcctcc
ccctcccagggacccctaggtttgccacaaccgggacgcaggtatgggagctcccacccc
aacacgagaagtcccacttcctccatgcttcacaacacgggattcacacctgctcagtca
ctgagagatctgatcaatagctccagcttccctcctaaacccggggatgtgttgcagggt
acttctcgctacccacagcctctgtctgccggagcagcgacacagatgtccctacatcag
aggggcatgcctgagtcctccttcctgaagaggagtgaagccagcgcaactgtcccctcc
atctccatctcaatccccaaacccagctacgttccaaatctcgcctcagcatccacagat
aaaacaatcacacttaaccacatgacagttcaaggaaggcagaactccccgatggccaaa
ccttcgtcttcagaccggagcacagggacgtcttcctggaagcagagttctgagccgccg
tctgccccctcagccaagcgacgaagaaggacgtcccctgggcccattatcatcatcaaa
gatgaaccagaggacgaggatgaagttcattttgtgcagtccagcgttgggtccagcctg
cccgacagcagcaccggggctcagtcaaatccccggcttcagcagaaggtgtctgtccca
aacctggtccctggatcagagtccaacactgggaaagagcagtgtcctcagcccgttgct
cagccagagtctgtgaagagagcggagccggaggaagatcccaacgaagactggtgtgcc
gtgtgtcagaacggaggagagctgctgtgttgcgacaagtgtcccaaagttttccacctg
tcctgccacatccccacgctgaacgagtcccccagtggcgagtggttctgttcattctgc
cgagacctcgtctcacctgagatggtgtacgactccgacagaaaggacgaggtcgtctct
gatggattctcaccggtcaatagaaggagctgtgagaggttgctcctgcgtctgttctgc
aatgacttcagcactgacttccagcagcctgcttctccatcggagaccaaacggtacaaa
gagctgatcaagacgccgattgatttgtcgatagtgaagaggagactggagtctaagtcg
caggacggtgaatattatatgtgtctggagggatttgtcgccgatgtcaggctcatattt
ttcaactgtgcaaaatattacaaggtgacctcagaagtggggagcgcaggcgtgtacttg
gaggaatactttgaggagcagctgaagctcgcctacccagataagatcttccctggtggc
agggaagagcagatgatccctcctttagaggacgagatcgacgaagatgaagaaatgatg
acagaaaatgtggagcccatggaggatgacaaaccacagagtcctgcaggacaaggaatc
ccccctgtggaagaggatttggctcctctggaagaagcgccgtccgcagaagaggaggaa
aagttggaaactgaggagaaggcaaccaacacgagcaaggaggagaaggagaaggagacg
gaggagacggagacagaggagaaggagacagaggagaaggagacagaggagaaggagaca
gaggagaaggagacagaggagaaggttgccgccgctgaggacgccacttctcttacagag
gaggtagagaaggatgagaagactcccgtgaaggaggtgaaaagccctctcgctgctgat
agtgacacaaaagacggggtcgctccctgctccccagaggaggacaacccttacctccct
gcagagaagactgtagatgcggccgaaacccaggaggaggaggcggcagacacagccaaa
gaggagtcagcgtag
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