Hippoglossus hippoglossus (Atlantic halibut): 117757643
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Entry
117757643 CDS
T07778
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04260
Cardiac muscle contraction
hhip04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117757643 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117757643 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
117757643 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117757643 (cacna2d4a)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117757643 (cacna2d4a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
VWA
VWA_2
dCache_1
CobT_C
MCP-like_PDC_1
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
117757643
NCBI-ProteinID:
XP_034434854
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Position
23:complement(11026312..11101773)
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AA seq
1200 aa
AA seq
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MLSMLLSDKLSLWTVSRFELYMNVSQVDLYFVTITLQRATITGLMQIAAAAGMNRWGPGR
AGNATKSDRSGPRGGRLMMLVWIILFSSLCLMVDGQMKIPPETVQQWAVSFSKDIAALSA
RYSGAKLLQKKYKDIEGMVKIEEVDGEELAKKFAEEMEEMLGRKMKSVKRLAEAAEDADL
YHEYNETLEFDYYNSMLINSYDQEGNSVPLGGEFPLEANEHFNKLPVNTQLSNIQVPTNV
YNRDPDILNGAYMSEALNDVFIDNFQKDPTLTWQYFGSATGFFRLYPGIKWTSDENGVVT
FDSRNRNWYIQAATSPKDVVIVVDVSGSMKGLRLTIAKHTINTILDTLGENDFVNIIAYS
DYVRYVEPCFKGTLVQADLDNREHFKILVEELHVKGEGKVKYAMKESFKILNEAAALGQG
SLCNQAIMLITDGAMEDFQEVFKEFNWPERRVRVFTYLIGREMTFADNVKWIACNNKGYY
THVSTLADVQENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLFDTQAQSLLLMTSVAMP
VFSKKKETLSHGILLGVVGTDVALRELMRLAPRYKLGVHGYAYLITNNGYILSHPDLRPL
YKEGKKLKPKPNYNSVDLSEVEWEDTEEKLRTAMVKGETGTLSLDVRTSVDKGTRVMFLK
NDYFHTVLNETPFSLGIVLTRGYGQYIFIGNVSVEEGLHDLLAPDLTIASEWTYCETDID
PAHRKLNQLQAVVRYLTGKEPDLECDVLLLQQTLFDAVVTAPMEAYWTALMLNTSGMDDG
VETAFLGTRSGLLRFQRYTGIEKRVAKSFLTSTDKENMFTLDHFPVWYRRAAEYPAGQFL
YYMPRQDTRDVFRDYEADYSATLSAEEVEHQAEEGGRKRRRAEEEEAGPIVISTTAVTVT
VGKKTAIAGAIGVQMTLDAFESRFWSITSQPNDTDCSDIEGKCPLRCGSFDINCYLIDNN
GFVLISKQRNDAGRFFGEVDGSVMTTLIRMGMFKRVSLFDYQAMCKMNSHSVNSARPLLS
PFYGLASALKWLLSNFLLFLLEFNICGFWHTEHFADAKPSFSVSSAHKKKGDILQPCETE
YPSFVYEPSVKETNSIIKCGRCQKMFVVQQIPDSNLLMLVVQADCDCSRQYSPITMEPKE
VKYNASVKCDRMRSQKIRRRPESCHAYHPQENANDCGRASFISLSVSLFFICLSFSTIVS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgctctccatgctgctcagtgacaaactcagtctctggacagtttccagatttgaactc
tacatgaatgtctcgcaagtggacctttactttgtaacaattactttacagcgagcaaca
atcactggactgatgcaaatcgcagcagctgcggggatgaaccgctggggtccgggaaga
gccgggaatgccactaaatcggaccgaagtgggccgcgcggagggaggctgatgatgctg
gtgtggattatcctcttcagctcgctgtgcctgatggtcgacgggcagatgaagatccca
ccagaaacggtgcagcagtgggccgtgtcctttagcaaagacattgctgctctgtccgcc
aggtactctggagccaagctgctacagaagaaatacaaggacatcgagggcatggtgaag
attgaggaggtggacggagaggagctggcgaaaaagttcgcagaggagatggaggagatg
ctcgggaggaagatgaagtcagtgaagaggttagcagaagcagcagaggatgcagattta
taccacgagtacaatgaaacactggagtttgattattataactccatgctgatcaactca
tacgatcaggaggggaactcggtgccgctgggaggagaattccctctggaggcaaatgaa
cacttcaataaactgccagtcaacacacagctgagcaacatacaagtccccactaacgtc
tacaaccgagatccagacattctcaacggagcctacatgtccgaggccctgaatgacgtg
ttcatcgataacttccagaaggacccgactctcacgtggcagtactttggcagcgctaca
ggcttcttcaggctgtacccagggatcaagtggacttcagatgaaaatggtgtggtcacg
tttgatagcagaaacagaaattggtatatccaagcagccacgtcccctaaagatgtggtg
atcgtggtggatgtcagcggcagcatgaagggactcagactgaccatcgccaaacacacc
atcaatacaatcctggacacactgggagaaaatgactttgttaacatcattgcttacagt
gattatgttcgttacgtggagccctgcttcaagggcacactggtacaagctgatctggat
aaccgggagcatttcaagattttggttgaagagcttcatgtgaaaggagagggcaaagtg
aaatatgcaatgaaagaatctttcaagattctcaatgaggctgctgcactgggccagggc
agcctgtgtaaccaggccatcatgctgattacagatggagccatggaggacttccaggag
gtttttaaggagttcaactggccagaacggagggttcgagtgttcacctacttaattgga
cgtgagatgacatttgctgataatgtcaaatggatcgcctgcaataacaagggttactac
acccacgtctccacgctggctgacgtgcaggaaaacgttatggagtacctccatgttctc
agccggccgatggtcatcaaccatgatcatgacatcatatggaccgaggcctacatggac
actgtgctgttcgatactcaggcccaaagcctgctgctgatgacctcagtggccatgcct
gtgttcagcaagaagaaagagactttgtctcatgggattctgctgggagtggtgggaact
gacgtggccctaagagaactgatgagattagctcctagatacaagttgggtgtccatggt
tacgcctacctcatcactaacaacggctacatcctgtctcaccctgacctacgaccgttg
tataaggaggggaagaagttaaagccaaaacccaactacaacagtgttgatctgtcagag
gtggagtgggaggacactgaggagaaactgaggacagccatggtgaaaggagaaactgga
acgttatctttagacgtgagaacgtcagtggataaaggaacgagagtgatgttcctgaag
aatgattactttcacaccgtcctcaatgagacgccatttagtctgggtatagtgttaact
cgggggtatggacagtatatcttcattggcaacgtctctgttgaagaaggtcttcatgac
ttactggctccagatctgaccatagccagcgagtggacatactgtgagactgacattgac
ccagcccaccgcaagctgaatcagctgcaggctgtggtacgatacctcactggcaaagaa
ccagatttggagtgtgatgtgttgttgttgcaacaaactctgtttgatgctgtggtcacg
gctcctatggaagcttactggaccgcccttatgcttaatacatctggtatggacgatgga
gtagaaacagcgttcctggggacccgttcaggcctgttgagattccagcggtacactggt
attgagaaaagggttgctaagtctttcctgacctccacagacaaggagaatatgttcaca
ctggaccatttcccagtatggtaccgcagagcagccgagtacccagctggacagtttcta
tactacatgcccagacaggacactagagatgtgttcagggactatgaggctgactatagc
gcaaccttaagtgctgaggaggtggagcaccaagcggaggagggagggagaaaacggagg
agggcagaggaggaggaggcagggccgatagtgatctctaccactgcagtcactgtgacc
gtgggcaagaaaactgccatcgctggagccatcggtgtccagatgactcttgacgcgttt
gagtccagattctggtccattacgtcacagccaaatgacacagattgctctgacatagaa
gggaaatgtcctcttcggtgtggcagctttgatatcaactgttacctgattgacaataat
ggatttgtcctaatttctaaacagcgtaatgatgcggggaggttctttggtgaggttgat
ggatcagtgatgaccacacttatcagaatgggcatgttcaaaagggtgtccttgttcgac
taccaggccatgtgtaagatgaactcgcactctgtcaacagcgctcgtccacttctcagt
ccgttctatggtttggcttcagcgctcaagtggctcctctccaacttccttctgttcctc
ctggagtttaatatctgtggcttctggcacacggagcattttgctgatgcaaagccatct
ttcagcgtgtcctcggctcataagaaaaaaggggacatcctgcagccgtgtgaaaccgag
taccccagcttcgtttatgagccgtcagtcaaagagaccaacagcattattaagtgtgga
cgctgccagaagatgtttgtggtgcaacagataccagacagcaacctcctgatgctggtg
gttcaagcagactgtgactgttccagacagtacagtcccatcaccatggagcccaaggaa
gtcaaatataacgcctcggtaaagtgtgacaggatgaggtcgcagaagattcgcagacgg
cccgagtcctgccacgcctaccatccacaggagaatgccaacgactgcggacgagcttct
ttcatttctctctcagtctctctcttctttatctgtctttccttctccacgatcgtctct
tga
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