Hippoglossus hippoglossus (Atlantic halibut): 117757709
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Entry
117757709 CDS
T07778
Symbol
snd1
Name
(RefSeq) LOW QUALITY PROTEIN: staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
117757709
NCBI-ProteinID:
XP_034434982
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Position
23:12731761..12905705
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AA seq
911 aa
AA seq
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MASVSAPAQAAPAPSAHLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGPMAR
RAAQGQPDTKDTPDEPWAFQAREFLRKKLIGKEVCFTVEIKTSQGREYGMVYLGRDTTGE
NLAESLVNEGLATVRREGIRGNNPDQARLCELEDQSKSSKKGQWSEGGGTHTIRDMKYTI
ENPRNFVDSLHQKPINAIIEHVRDGSVVRALLLPDHYLVTVMLSGVKCPSFRREPDGGET
PEPFAAEARFFTESRLLQRDVQIVLESCPNQIILGTILHPNGNITELLLKEGFARCVDWS
MAVYTQGAEKLRAAERSAKERKVRIWKDYVAPTANLDLKDRQFVAKVMQVVNADAMVVKL
NSGEYKTIHLSSIRPPRIEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLSGKKVNVTV
DYIRAATGPGEGTPAFSERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDEL
LAAEARAIKNGKGLHSKKEVPIHRVADISGDTQKAKQFLPFLQRAGRSEAVVEYVFSGSR
LKLYMPKETCLITFLLAGIECPRSSRNTPGGVQVAEPFSEEAMLFTKELVLQREVEVEVE
SMDKAGNFIGWLHIEGVNLSVALVENALSKVHFTAERSGYYKTLVSAEEGCRERKEKVWS
NYEEKPVEEVVHVKEEKERVENYRPVFVTEIADTLQFYAQDVETGGQLEGLMETLRAEIA
AQPPVEGSYAPRRGDHCIAKFADGEWYRARVEKVESPAKVHVFYIDYGNREVVSSTRLAV
MPPAFSTRTLPAQATEYAFAFIQVPQDEDARADVVDCVVRDIQNSQCLLNVEYSGATCSH
ATIQFGDTKNDVGLGLVKEGYVMVDVRKDKYLQKIVTEYLNSQESAKSARLNIWRYGDFR
GDDAEEFGYRR
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcggcaccagctcaggcggcccccgctccgtctgctcatctgcagcgg
gggatcgtgaagatggtcttgtcgggctgtgctatcattgtgcggggccagcctcgaggc
ggcccgcccccggagcgtcagatcaatctcagtaatatccgagcggggcccatggcccgc
cgagccgctcagggccagcccgacaccaaggacactcccgatgagccgtgggcctttcaa
gccagagagttcctgcggaagaagcttatcggcaaagaagtttgcttcactgtggaaatc
aagacctcacagggcagagagtacggcatggtctacctggggagagacacaacaggcgag
aacctcgccgagtctttggtgaacgagggcctcgccacagtccgcagggaaggaatcaga
gggaacaatccagaccaggccagactgtgtgaattggaagaccagtcaaagtcttccaag
aagggccagtggagcgagggcggcggcacgcacaccatccgggacatgaaatacaccata
gagaatccccgcaacttcgtcgactccttgcaccagaaacctattaacgccatcatcgag
catgtgcgtgacggcagtgttgttcgtgccttgctgctccccgaccactacctggtcacc
gtcatgctgtctggagttaagtgtccctcgttcaggcgggaaccggatggcggggagaca
ccagagccgtttgcagcagaggccagattcttcaccgagtcccggcttctgcagagagac
gttcagatcgtcctggagagctgccccaaccagatcatattgggcaccatccttcacccg
aacgggaacatcacagagctcctgctgaaggaaggattcgcccgctgcgtggactggtcc
atggccgtttacacccagggagccgagaaactcagagctgctgaacggtctgctaaagag
cgcaaggtccgcatctggaaggactacgtcgcgcccacagccaacttggacctgaaggac
agacaatttgtagccaaggtgatgcaggtggtaaatgctgacgccatggtggtcaagctc
aactccggggaatacaagaccatccacctgtccagcatccggcccccaaggattgaggga
gaggagaagaacaaggacaaagacaaacgtttccgtcccctgtatgacatcccctacatg
tttgaggcccgggagttcctgaggaagaagctcagtggtaaaaaggtcaacgtgacagtg
gactacatcagagcagctaccggcccaggagaaggcacccctgccttctcagaacgcacc
tgtgctacagtcacaatcggcggcattaacatagcagaggctctggtcagtaaaggcctc
gccacggtgatcagatacagacaggacgacgaccagcgctcctcccactacgacgagctg
cttgctgcagaggctcgggccatcaaaaacgggaaaggcctgcacagcaagaaggaggtt
cctatccacagagtggcagacatctctggggacacacagaaagccaagcagttcctgccc
ttcctgcagagggccggccggtcagaagcggtggtcgaatacgtcttcagcggctcccgc
ctcaagctgtacatgcccaaagaaacctgcctcatcacattcctccttgccggtatcgag
tgtccacgcagctccagaaacacgcccgggggcgtgcaggtggccgagcccttcagcgaa
gaggccatgctgttcaccaaagagctggtgctgcagagggaggtggaagttgaagtggaa
agcatggacaaagcagggaacttcattggctggctgcacatcgagggtgtgaatctgtcg
gtggcgctggtggaaaacgctctgtccaaggtccacttcacagcggagcgcagtggctac
tacaaaaccctcgtctcagcagaggaggggtgccgagagaggaaagaaaaggtctggtcc
aactatgaggagaaaccagtcgaggaggttgtgcacgtgaaagaggagaaggaacgtgtg
gaaaactacagaccagtattcgtcaccgagatcgccgacaccctgcagttctacgcccag
gacgtagagacaggaggccagttggaaggtctgatggagaccttgagagcagagatcgcc
gcccagcctccagtggaaggatcctacgccccgcgccgaggggaccactgcatagccaag
ttcgctgatggcgaatggtacagagcccgagtggagaaagttgagtcgccggcgaaggtg
cacgtcttctacatcgactatggcaacagagaagtggtgtcgtccacccgtctagctgtc
atgccccccgccttcagcaccaggaccctgccagcacaggccaccgagtatgccttcgcc
ttcatccaggtcccacaggacgaggacgcccgtgcggacgtggtggactgtgtggtgcgg
gacatccagaacagccagtgcctgttgaacgtggagtactcgggggccacctgctcacac
gccacgatacagttcggggacaccaagaacgacgtcggcctcgggctggtcaaagaggga
tacgtcatggtggacgtccgcaaggacaagtacctgcagaaaattgtgacagagtacctg
aacagtcaagaatctgctaagagtgccaggctcaacatttggcgctacggagacttccgc
ggcgacgatgccgaggagtttggatacaggcgttaa
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