Hippoglossus hippoglossus (Atlantic halibut): 117757986
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Entry
117757986 CDS
T07778
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117757986
NCBI-ProteinID:
XP_034435139
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Position
24:19613250..19619084
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AA seq
657 aa
AA seq
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MDLRVTSVLLVLLALAAATPERYHHVPRVNKGPYPVKSHAVAGEQGPPGEPGEPGPMGPP
GSPGQSGVGHTGPQGPQGPAGPPGFTQAGKPGTPGGPGKPGAPGMPGDRGANGAPGQMGP
RGGPGSSGTPGPAGLSSAGRPGPSGSPGANGQRGESGLKGHPGIPGLPGNKGERGIGVPG
VQGQPGSVGPMGPSGMPGKPGVGKPGAPGYSGEPGKGGMPGRDGASGPMGMTGPKGHTGA
PGTGASGKPGQNGTPGMNGPIGPKGPQGPAGQPGSPGMPGVGKTGESGIPGNRGAPGTSG
TTGQKGEPGPTGFTGHPGSTGSIGPGGPQGSRGFQGEAGPTGPKGDIGMVGAPGQRGTKG
DQGAQGFTGKPGTPGAVGPAGSTGHNGPQGPKGSQGHGGAPGLPGSNGAPGLKGHTGSSG
APGKSGENGRPGPMGQSGPSGPAGPSGLKGHAGLPGPPGPAGFTSKGVSGPQGPPGNPGS
RGHDGLPGAAGPPGQPGQPGEVVYHHEKSMPVKSHEVVMSHEMMKAPMSAFSAVLTRAYP
EAATPIQFNQVLYNGEHHYDANSGVFTCQIPGLYYFSYHVHVNGANALVALYKNEEPIVF
SYDEYNKGFLDQMSGSAVVMLHPGDRVYVQVPDEESNGIFAADNVHCTFSGFLIAST
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggatctgagggtaacaagcgttctcctcgtcctcctggctttggccgcggcaacccct
gaaaggtaccaccacgtgccgagagtgaacaagggtccctaccccgtcaagagccatgcc
gttgcaggtgagcaaggtcctccaggagaaccaggagaaccaggcccaatgggaccacct
ggatctcctggacaaagtggtgtagggcatactggaccacaaggcccacaaggacccgct
ggaccccctggcttcactcaagcaggtaaacctggtacccctggtggccctggaaaacca
ggtgcccctggcatgcctggtgacagaggtgcaaatggggcacctggacaaatggggccc
agaggtggacctggttcatctggaacacccggacctgctggactttcttctgctggaaga
cctggaccaagtggtagtcctggagcaaatggacaaagaggagagtctggcctgaaggga
catcctggtattcctggtcttcctggcaacaaaggagagagaggtattggagttcctggt
gttcaaggacaaccaggctcagttggaccaatgggtccctctggtatgccagggaaacct
ggagttggtaaacctggtgcccctggctattctggtgagcctggcaagggtggcatgcca
ggaagagatggtgcttcagggccaatgggtatgacaggaccaaagggtcacactggcgct
ccaggcacaggagcatcaggaaagccaggccaaaatggtaccccaggtatgaatggacct
atagggcctaaaggtccacagggtccagctggtcagccaggctcccctggcatgccaggt
gttggcaaaacaggtgaatctggaattccaggcaacagaggagcccctggcacttctgga
accactggtcaaaaaggagagccaggcccaacaggttttactggtcacccaggttctaca
ggttccataggcccaggtggtccacaaggttcaaggggatttcaaggtgaggcaggccca
acaggacccaaaggtgacattggtatggttggtgccccaggccaaagaggaaccaaaggt
gatcaaggagctcaaggtttcactggaaaaccaggtacccctggagcagtaggccctgca
ggaagtacaggtcacaatggtccacagggtccaaagggttcacaaggtcatggtggtgct
ccaggactccctggttcaaatggcgccccaggacttaaaggacacacaggttcctcagga
gcaccaggaaagagtggtgagaacggaagaccaggacccatgggacaatcaggtccctct
ggtccagccggcccctctggacttaaaggtcatgcaggtcttcccggcccacctggtcca
gctggcttcacatctaagggcgtttctggtcctcagggtccacctggaaatccagggtca
aggggtcatgatggtcttccaggcgcagctggtcctcctggtcaacctggccaaccagga
gaggtggtctaccaccatgagaagagcatgccagtcaagtcccatgaggttgtaatgtct
catgagatgatgaaggcacccatgtctgcattcagtgctgtgttgaccagggcctatccc
gaagcggcaactcctattcagttcaaccaggttctgtacaatggggagcaccattatgat
gccaacagtggtgtatttacctgccagattcccggcctctattatttcagctatcatgtt
catgtcaatggtgcaaacgcattggtggctctctacaaaaacgaggagcctattgttttc
agttacgatgagtacaacaagggcttcctggatcagatgtcaggcagtgctgtggttatg
ctgcatcccggtgacagagtctatgtacaggtccctgatgaggagagtaatggtatattt
gcagcagataatgttcactgcactttctctgggttcttgattgcctcaacgtga
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