Hippoglossus hippoglossus (Atlantic halibut): 117757990
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Entry
117757990 CDS
T07778
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117757990 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117757990 (capn3b)
Enzymes [BR:
hhip01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117757990 (capn3b)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C2: calpain family
117757990 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117757990
NCBI-ProteinID:
XP_034435144
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Position
24:complement(5761343..5773022)
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AA seq
772 aa
AA seq
DB search
MEDKTHEGKVPLVEDTQVKVLHETEASHGPDDKADYPPVGANSIYSAILSRNEAVKDAKR
LKTFLELRDKYLKKKVLFEDPLFPANDSSLFYSRKPSMKIEWKRPSEICDKPEFIVDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTDNYAGIFHFQFWRYGEWIDVV
VDDRIPTCNNQLVFTKSFRKNEFWSALLEKAYAKLHSSYEALKGGNTLEAMEDFTGGLTE
FFELSAASKDLYNIMKKALERGSLMGCSIDVVSASEMETRTDHGLVKGHAYSIIGLEECD
EVAKDTKIRLIRLRNPWGWVLWKGPWSADSKEWSTISIADKENLKKQTVEASEFWMSFDD
FKRNFTKLEMCNLTPDALQGDERNTWTVSVNEGRWVRGSSAGGCRNFPDTFWTNPQYRLQ
LYEEDDDPEDGTVACTLVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKD
FFLYTASKAKCKTYINLREVTERFRLPPGEYAILPTTFEAHQEGEFLLRVFSEKQSTSEE
AENTIESGKIQQDKRKREKPIVFVSDRARANKEIEHDGIRGEKKKKPKRKLLEPEEETEE
EKQFRAIYQQISGEDMQICANELQTIMKNVLSKHGEIKTKEGFSLETCRSMIALMDTDGT
GKLNLQEFKHLWKKIKKWQMIFKRYDKDKTCSISSFEMRNTVNDAGFHLNKQLYDIIAMR
YADEHLNIDFDSYICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagacacatgaagggaaagttcctctggtggaagacacacaggtgaaggtg
cttcatgaaactgaggcatcacacgggcctgatgacaaagccgattaccctcctgttggg
gcaaactccatctactctgccatcctgagcagaaatgaggccgtgaaggatgccaagcgt
ctcaagacattcttggagctgcgggacaaatacctgaagaagaaggtgttgtttgaggac
cccctgttccctgcaaacgactcctcgctcttctacagtcgcaaaccttccatgaagata
gagtggaaacgtccctcggaaatttgtgacaagcctgagttcatcgtggacggagccaac
aggacggacatctgtcagggagaattgggtgactgctggctgctcgctgccatcgcctgc
ctgacgctgaacgagaagctgctgtacagagtgatccctccggaccagagcttcactgac
aactacgccggcatcttccacttccagttctggcgttatggcgaatggatcgacgtggtc
gtggacgaccgcatccccacctgcaacaaccagctggtgttcaccaaatctttcagaaag
aacgagttctggagcgcgctgttggaaaaggcctatgcaaagttgcacagctcttacgag
gcactaaagggggggaacacattggaagccatggaggatttcacaggtggccttaccgag
ttctttgagttgtccgcggcgtctaaagatctgtacaacatcatgaagaaggcgctggag
cgaggctcgctgatgggctgctccatagatgtcgtctcagccagtgaaatggagactcgg
actgatcacgggctggtcaaaggccacgcctactccatcatcggcctggaggagtgtgat
gaagtagcaaaggacaccaaaatacgcctgattcgcctgcgcaacccctggggctgggtg
ctgtggaagggaccgtggagtgcagattccaaagagtggtcgaccatttccatcgcggac
aaggagaacctaaagaaacagactgtggaagcgagtgagttctggatgtctttcgatgat
ttcaagaggaacttcacgaagctggagatgtgtaacctgacgcccgacgcgctgcagggg
gacgaaagaaacacctggactgtgtcggtcaatgagggccgctgggtgagaggcagctct
gctggcggctgcaggaacttcccagacacattttggacaaaccctcagtatcggctgcag
ctttatgaggaggacgacgacccagaggatggaacggtggcctgcactctggtcgtggct
ctgatgcagaaaggtcgacggatgcagcgccatcaaggggccaaattcctcaccatcggg
ttttccatctacgaggtgccaaaggagatgtgtggacagaatcagcatctgcagaaggac
ttcttcctgtacacagcctccaaggccaaatgcaagacctacatcaacctgcgagaggta
acggagcgtttccgcctgccgccaggagagtacgccatcctccccacgacctttgaagcc
catcaagagggcgagttcctcctcagggtcttctccgagaagcagagcacgtccgaggag
gcggagaacaccatcgagtccggaaaaatccagcaagacaagagaaagagggaaaagcct
attgtatttgtgtcggacagagcgcgagccaacaaagagattgagcatgacggcattcga
ggggaaaagaagaagaaaccaaagcgaaagcttttagaacctgaggaggagactgaagag
gaaaaacagttcagggccatttaccaacagatttctggtgaggacatgcagatctgtgcc
aacgaactccagaccatcatgaagaacgttctctccaaacatggtgaaatcaagaccaaa
gaaggtttcagcctcgagacgtgtcggagtatgatcgccttgatggataccgatgggacc
ggaaaactgaacctgcaggagttcaagcacttgtggaaaaagatcaagaagtggcagatg
atcttcaagcgttatgataaagacaaaacttgctccatcagtagttttgagatgaggaac
actgtgaatgacgcagggtttcacctcaacaaacagctttatgacatcatagcgatgcgt
tacgccgatgaacacctcaacatcgactttgacagttacatctgctgctttgtgaggcta
gagggaatgttcagagcttttaatgcctttgacaaagacggagatggaataattaaactc
aacgtcctggagtggctccagctcaccatgtattcttaa
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