Hippoglossus hippoglossus (Atlantic halibut): 117757997
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Entry
117757997 CDS
T07778
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117757997 (stxbp5a)
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117757997 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117757997 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
ANAPC4_WD40
WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_Vps41
Synaptobrevin
CFAP43_N
MIOS_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
117757997
NCBI-ProteinID:
XP_034435155
LinkDB
All DBs
Position
24:8146326..8235161
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AA seq
1143 aa
AA seq
DB search
MKKFNIRKVLDGLKEASSSTPSVQVGPQENHLIQESLQSEHFQLCKTVRHGFPYQPSSMA
FDPVQKILAFGTQSGALRFFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSVHL
WNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIMWN
KAIELSSKAHPGPVVHISDNPMDEGKLLIGFESGIVVMWDLKSKKADYRYTYDEAIHSVA
WHHEGKQFICSHSDGTLTIWNLRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTR
NGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEPYA
VVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQK
RQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFDR
NRSKEDKGSADMSDEDPFAIQIMAWCPESRMLCVAGVSANVIIYRFSKLEVTTEVVQLLE
VRMQYELNDIESPDGGGGGGEQTSALPTPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVR
STPLKQSAGYQVDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYIQKTVV
LNLGTVELYGANDPYQRQPRSPRKTRQPSGGLCDINEGSATSEDRCKSPTSVLTSNSNLQ
QFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDK
EAREAISSFHFCETFARKGDNALTPCLNVGTTLGTVLALALTLPPAGEQRQLQPVIISPT
GMLVRLKGSIMRMAVLDSTGSVLPPPFEPWFEPNVTADGEEREKVRKRRPVSVSPSTSQD
LNESQYAVVCSEKQAKVISLPSQTCIHKHSITETSFILRADVVQMSLGVCLACFCANGHI
MTLSLPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLCSPTEVQRITYSQDTCENLQE
MLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGEISSGKASRGLAQHIPGPGGLE
GMKGAASGVVGDLARARIALDERGQKLGELDERTAAMMASADSFSKHAHDMMLKCKDKKW
YQF
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacatcaggaaggtgctggacggcttgaaagaggcgtcctcctccacc
ccgtccgtgcaagtgggaccccaggagaaccatctgatccaggagagcctccagtccgag
catttccagctctgcaagactgtccgccatggtttcccctatcagccgtcgtccatggcg
tttgaccccgtgcagaagatactggccttcggcacccagagcggagctctcagatttttt
ggccgtccaggtgtggagtgttactgtcagcacgagagcggagctgccgtcatccagctg
cagtttctcatcaatgagggagcactggtgagtgctctggccgatgacagcgtccacctg
tggaacctgaggcagaagagaccggccatccttcactcccttaagttcaacagagagaga
ataacttactgccacctgcccttccagagcaagtggctgtacatcggcacggaacgaggg
aacatccacatcgtcaacgtggagtcctttaccctctcaggctatgttatcatgtggaac
aaagccatcgaactgtcctccaaggctcaccccggacctgtcgtccatataagtgacaac
ccaatggatgagggaaagcttttaattggattcgagtctggcatcgtggtcatgtgggat
ctgaaatcaaagaaggccgactatcgctacacttacgatgaggcgatccactcagttgcc
tggcatcacgagggcaagcagttcatttgcagtcactcggatggaactctgaccatatgg
aacctcagaggccagggcaaacccatacagacaatcaccccacacggaaaacagcccaag
gacgggaagaagccagagccttgtaaacccattctcaaagtggagtacaaaaccacaaga
aatggggaacccttcataatcctgtctggtgggctgtcctacgacacggtgggccggcgg
ccatgtctgacggtaatgcacggaaagagtacggctgtgctggagatggactatcccata
gtagatttcctcacactctgtgagacaccataccctaatgattttcaggaaccttacgct
gtggtggtccttctggagaaggatttagtggtgatcgaccttgcacaaaatggttacccc
atattcgaaaacccctatcctctgaccatccacgagtctcctgtgacctgctgcgagtac
tttgccgactgccctgtggacctcatacctgcactttactccgttggctcgcggcagaaa
cgacagggctacagcaaaaaggaatggcctattagtggtggaaactggggtcaaggcaca
caaagctacccggagatcatcatcactgggcacgctgatggaactgtgaagttctgggat
gcctctgcaataatgctccaggtgctctacaagctgaaaacagccaaggtgtttgacagg
aaccggtccaaggaagacaagggcagcgcggacatgtcggacgaagaccccttcgccatt
cagattatggcctggtgccccgagagccggatgctgtgcgtggccggggtgtcggccaac
gttatcatctaccgcttcagcaagctggaagtaactaccgaggtggtgcagctacttgag
gtgcgaatgcagtacgagctcaacgacatagagtctccagatggtgggggcggagggggg
gagcagacgtcggctctcccaacacccggcgcctcccctcagacgagcgggccgccttca
cacccctccaccagcagcaacaactctgacggaggcaacatgccctgcctcaaagtgcgc
agtacccctctgaagcagtccgcaggctaccaggtggatttggtggtccagttagtgtgg
gtgagtggagagcctccccagcagatcacaagcctggcgctcaattcctcctacggccta
gtggtgtttggcaacagtaacggtctggcagttgtggactacatccagaagacggtcgtg
ctcaacctggggacggtcgagctttacggcgccaatgacccctaccagaggcagccccgg
tcgccaagaaagacaaggcagccgtctggaggtctatgtgacatcaacgagggctcagcc
acatcagaggaccgctgcaagtcgcctacttcagtgttgacgtcaaacagcaatctacag
caattctacaatggaggtggtagaggagcaaagatgtcacggaaattaagcttgcctact
gagctaaagccagacttggtcctcctgtctgtatgcccgccgcggggtgccaacccatta
gaccaccgggacaattccttcagccgctctcgctcctccagcgtcaccagcatcgacaag
gaagcccgggaggccatcagctccttccacttctgcgagacctttgcccggaagggggac
aacgccctgacaccctgcctgaatgtgggcacgaccctgggaaccgtgctggctctggct
ctcacattgccacctgctggggagcaacggcagctgcagccggttatcatttcacctact
ggcatgttggtacgactgaagggcagcatcatgcggatggctgtcctggactccacaggg
tccgtgctgccccccccattcgagccttggtttgaacctaacgtcacagcagacggcgaa
gagcgagagaaggtccgcaagcgccggcccgtctccgtgtccccttccacctcgcaggac
ctcaacgagagccagtacgccgtggtgtgttcggagaaacaggccaaagtcatctccctc
ccctcgcagacctgcatccacaaacacagcatcacggagacgtcgttcatcttacgggcg
gacgtggtgcagatgagcctgggcgtgtgtctggcttgtttctgcgccaacggccacatc
atgaccctcagtttgccgggcttgagaccgctcatggatgtaaactacctgcctttgacg
gacatgcggatagccaggacgttttgtttcacaaacctcggccaggccatgtacctctgc
tcccccaccgaggttcagaggatcacctacagtcaggacacctgtgaaaacctgcaggag
atgctgggtgaacttttcacaccagtagaaacaccagaggctcccaacagagggttcttc
aaaggcctctttgggggaggagcgcagtcactggacagagaggagctcttcggcgagata
tcatctggaaaggcatctcgaggcctggcccagcacatcccaggccccggtggcctcgag
ggcatgaagggggcggcctctggtgtggtcggggacctggcacgcgcccgaatagcgctg
gacgaaagaggccaaaagctgggcgagctggatgagaggacagccgccatgatggccagt
gcagactccttctccaaacacgcccatgacatgatgctgaagtgcaaagacaagaaatgg
taccagttctga
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integrated database retrieval system
