KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117758206
Entry
117758206         CDS       T07778                                 
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082  ATP-dependent chromatin remodeling
hhip03083  Polycomb repressive complex
hhip04110  Cell cycle
hhip04330  Notch signaling pathway
hhip04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117758206
   03083 Polycomb repressive complex
    117758206
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    117758206
   04350 TGF-beta signaling pathway
    117758206
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117758206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hhip03036]
    117758206
Enzymes [BR:hhip01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     117758206
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     117758206
   HDAC complexes
    Sin3A-HDAC complex
     117758206
    BRAF-HDAC complex
     117758206
    REST complex
     117758206
    SHIP complex
     117758206
    MiDAC complex
     117758206
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117758206
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117758206
  Chromatin remodeling factors
   NuRD complex
    117758206
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 117758206
NCBI-ProteinID: XP_034435555
LinkDB
Position
24:19860602..19870556
AA seq 548 aa
MSEEPLYTRGPPRPPAAAAPPTEPRSAPSVAPGPFRSSLRLPKPTPTNFQKEAKYRNMAY
TTAGGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKYHSDDYIKFLKYIRPDNMPEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSAAGA
VKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGD
GVEEAFFTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYEQIF
KPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYMKTFNLPMLMLGGG
GYTIRNVARCWTYETAVALDTEIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTREYMEK
IKQRLYENLRMLPHAPGVQMQAVAEDAVPDDAMEEDTEDPDKRLSIRATDKRIACDEEFS
DSEDEGEGGRRNVSNQKKGAKRPRADDDDKEAEEKKTVVEIKEEEKTKESSPEKTETKSV
KTEQPTSD
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgagcgaagaacctctatatacaagaggtccgccccgcccccccgctgcagctgctcct
cccactgagccgcgctccgcaccgtctgtcgctcctggtcccttccgttcatctttacgt
ctgccgaagccaactccaaccaactttcagaaggaggcaaagtaccgcaacatggcgtac
acgactgcgggtgggacgaagaagaaggtctgctactactacgacggtgacgtaggaaat
tactactatggacagggccaccccatgaaaccacatagaatcaggatgactcacaacctg
cttctgaactatggactgtacaggaaaatggaaatctacagaccacacaaggccacagca
gaggagatgaccaaatatcacagcgatgactacatcaagttcctcaagtacatacggccg
gacaacatgcctgagttcagcaagcagatgcagcgcttcaatgttggagaggactgtcct
gtgttcgatgggttgtttgagttctgccaactctctgctggtggctctgctgctggtgca
gtgaaactgaaccgacagcagactgacattgcagtgaactgggcaggaggacttcaccac
gcaaagaagtctgaagcctctggattctgctacgttaatgacattgtgctggccatcttg
gagctgctcaagtaccaccagagggtgctctacattgatatagacatccaccatggggac
ggagtggaggaggccttcttcaccacagacagggtcatgactgtgtctttccataaatat
ggggagtacttccctggaaccggagacctcagggatattggagctggaaaaggcaaatac
tatgctgtcaacttccctctgcgtgatggtattgacgatgagtcatacgagcaaatcttc
aagcctgtgatggccaaggtgatggagatgtaccagcccagtgctgtggttcttcagtgt
ggtgcagactctctctcaggagaccgcctcggctgctttaacctcaccatccgcgggcac
gccaagtgtgtggagtacatgaagaccttcaacctcccaatgctcatgctaggtggagga
ggatacaccatccgtaacgtggcccgctgctggacctatgagacggctgtggctctggat
acagagatccctgatgaactgccctacaatgactactttgaatactttggacctgacttc
aagctgcacatcagcccctccaacatgaccaatcagaacacacgagagtacatggaaaag
atcaagcagcggctgtacgagaacctgcggatgcttcctcacgctcctggagttcagatg
caggccgtcgcagaggacgctgtcccagatgacgccatggaagaggacacggaggatcct
gacaaacgcttgtccattcgtgccacagataagaggatagcatgcgatgaagagttctct
gactctgaggatgagggcgagggtggcaggaggaatgtgtccaatcagaagaagggcgcg
aaaaggccaagagctgatgatgacgacaaggaagcagaggagaagaaaactgttgtagag
attaaagaggaagagaaaaccaaggagagcagtcctgagaagacggagacaaaaagtgtg
aagaccgagcagcccaccagtgactga

DBGET integrated database retrieval system