Hippoglossus hippoglossus (Atlantic halibut): 117758209
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Entry
117758209 CDS
T07778
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117758209 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117758209 (myo5aa)
04131 Membrane trafficking [BR:
hhip04131
]
117758209 (myo5aa)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117758209 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117758209 (myo5aa)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117758209 (myo5aa)
mRNA cycle factors
P-body specific factors
117758209 (myo5aa)
Membrane trafficking [BR:
hhip04131
]
Others
Actin-binding proteins
Myosins
117758209 (myo5aa)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117758209 (myo5aa)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117758209 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
DUF5382
HTH_17
Ac76
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
117758209
NCBI-ProteinID:
XP_034435579
LinkDB
All DBs
Position
3:complement(20577741..20631580)
Genome browser
AA seq
1849 aa
AA seq
DB search
MNRELEYMFVERARVWIPDAEEVWKSAELTKDYKNDDASLQLMLEDGTNIEHKLDPKTKN
LPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFMDSKLIYTYCGIVLVAINPYETLQI
YGTDIIHAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSASEANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDNRYRIIGAN
MRTYLLEKSRVVFQADEERNYHVFYQLCASSHLPEFKNLRLSSANNFLYTRQGRSPVIDG
VDDTKELCTTRNAFTLLGINESYQMGLFQVLAAILHLGNVEIKDRDSDSSIIAPNNSHLT
AFCELVGVTYQDMSQWLCHRKLKTANETYIKTLPRLQATNNRDALSKHIYAKLFNWIVGH
VNKALITNIKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
REQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPRGSDDTWAQKLYNTHLKTCSLF
EKPRMSNRAFIIQHFADKVEYQCDGFLEKNKDTVNEEQINVLKASKKFDLLVELFQDGEK
ATSPTGQVAGTGGRTRLSIKPDKSRETSSKEHKKTVGCQFRNSLQMLMGTLNATTPHYVR
CIKPNDFKLGFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LLDKKLTCRNVLEKLVEDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRVACIRIQKTIRC
WLARKKYLRKRSAAITIQRFTRGYQARCLAKFMRRTQAATTIQKYQRMCMERKRYKQKQA
AALAMQTILRGYIARLKYQALLREHKMVIIQKIVRGWLARCWYKRCLYSIVYLQCCFRRM
KARRELKKLKIEARSVEHFKKLNKGMENKIMQLQRKIDAQSKDNLLVVEKLHSLETSSTA
EKEKMRNELNRLRGVDEEAKTKTKQVSSLQEELERLRKELSTTQQEKKTIEDWAQTYRSE
MEKMVSELKDQNGLLKKDKDDLNRSIQEQSQQMTEKMARVIAEETQQLETDLNEERSRYQ
NLLTEQRRLEEKYDDLKERTLASNISKPGHRRTDSTHSSNESEYTYNSEYAELEEGSRAA
EDVTRGIDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFQRARARDDVEFKKARGAELE
YESLKRQELESENKKLKHNLAEMRQSLLGDAATNSGAPGSPAYKVLLDQLNSSCEELDVR
KEEVLILRSQLVSQKEAMHHKDEKETMTEPSVYVVDVSKLKDADEIKQAYVGLKDTNRLL
EHQLQTQRRGHDNEVEALRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLT
NENLELMADDPTASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQ
TEGQTSPGQMVDEPIHPVNIPRREKDFQGMLEYKKEDELKLVKNLILELKPRGVAVNLIP
GLPAYVLFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLH
CLKQYSGDEAFMKHNTSRQNEHTLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIV
SGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIK
QVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMMCGAKETLEP
LIQAAQLLQVKKKTDEDAEAICSMCLALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQT
RLRDRCESPQLLMDTKMIYPVTFPFNPSSLALETIQIPGSLNLGFLTRV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggagttggagtatatgtttgttgaacgtgctcgggtgtggatccccgatgca
gaggaggtgtggaagtctgctgagctcaccaaggactacaaaaatgacgatgcctctctg
cagctcatgctggaagatggaacgaacattgagcacaagcttgaccccaagaccaagaac
ctgccttacctgcgaaaccctgacatcctggttggagaaaatgacctcacagcgctcagc
tacctccacgagccggctgtgctccacaacctcaaagtccgcttcatggactccaagctc
atttacacttactgcggaatcgttctggtggccatcaacccgtatgagacactgcagatc
tacggaacagacatcatccatgcctacagcggtcagaacatgggagacatggacccgcat
atcttcgccgtggcagaggaggcctacaaacagatggccagggatgagaggaaccagtca
atcattgtgagcggggagtctggagcaggaaagacggtatcagccaaatacgccatgaga
tactttgcaacagtcagcggctccgccagtgaagccaatgttgaggaaaaagtcttggct
tccaaccccatcatggaggccatcggaaatgcaaagaccaccaggaatgacaacagcagt
cggtttggcaaatacatcgagatcggcttcgacaaccgctaccgtatcatcggtgccaac
atgagaacgtatctgctggagaaatcacgagtggtctttcaggcggatgaggagaggaat
tatcacgtcttctatcagctctgtgcatcgtcacatctgcctgagttcaagaatctgagg
ctgagcagtgcaaacaacttcctgtacacaaggcagggccgcagccccgtcatcgacggt
gtggatgacaccaaggaactttgcactactcgcaatgccttcacgctgctcggtatcaat
gagtcctatcagatgggcttgttccaggttttggctgcgattcttcatcttggaaacgtg
gaaataaaggacagagattcagacagcagcatcattgctcccaacaatagccacctgaca
gcgttctgcgagctggtgggcgtgacctaccaggacatgtctcagtggctgtgccacagg
aagctgaagacggccaacgagacgtatatcaagaccctccctcgtcttcaggccaccaac
aaccgagacgcgctctccaaacatatctacgccaagctctttaactggatcgtagggcac
gtcaacaaggctctgatcactaatatcaaacagcactccttcattggcgtcctcgacatc
tatgggtttgagacgtttgagatcaacagcttcgagcaattctgtatcaactacgctaat
gagaaactccagcaacaattcaacatgcacgtgttcaagctggagcaggaggagtacatg
agggagcagatcccctggactttgatcgacttctacgacaatcagccctgcatcaacctc
atagaagccaagatgggaatcctggacctgttggacgaggagtgcaaaatgccgagaggt
tcagacgacacctgggctcagaaactgtacaacacccatctgaaaacctgctccctgttt
gagaagccacgcatgtccaaccgcgccttcatcatccaacattttgctgacaaggtcgag
taccagtgtgacggtttcctggagaagaacaaggacactgtgaatgaagagcagatcaac
gtgctgaaagccagcaagaagtttgacctgctggtggagctgtttcaggacggggagaag
gcaaccagtcccactggtcaggtcgctgggacgggaggccgcacccgcctcagcatcaaa
cctgacaagagtcgggagacgagcagcaaggagcacaagaagactgtcggctgccagttt
cgtaactctctgcaaatgctgatggggactttgaatgcaaccacaccacattacgtccgc
tgcatcaaacccaacgacttcaagctgggcttcacgtttgatcctaaacgtgcggtgcag
cagctccgagcctgtggtgtcctggaaaccatccgcatctctgctgcaggtttcccatct
agatggacataccaggagttcttcagtcgttacagagtgctaatgaagcagaaggatgtg
cttctggacaaaaagttgacctgcagaaatgttctggagaaactagtggaggaccaagat
aagtaccagtttggtaagaccaagatcttcttcagggctggccaggttgcatatcttgag
aagttgagggcagacaagttgcgtgttgcctgcatccgcatccagaaaaccatccgctgc
tggctggcacgcaagaagtacctgcgcaagcgcagcgcagcaatcaccatccagaggttc
accagaggataccaggcgcgctgcctggccaagttcatgcgtcgcactcaggcggccacc
accatccagaagtaccagaggatgtgcatggagaggaaacgctacaagcagaagcaggct
gctgccctggccatgcagacgatcctcagaggttatatagccaggctgaagtaccaggcg
ctgctgcgggagcacaaaatggtgatcattcagaaaattgttcgtggctggctggctcgg
tgctggtacaagcgctgcctctactccatcgtctacctgcagtgctgcttccgcaggatg
aaggccagacgcgagttgaagaagctgaagattgaggctcgctcggtggagcatttcaag
aagctcaacaaaggcatggagaacaagatcatgcagctgcagaggaagatcgacgcgcag
agcaaggataatctgttggtcgtcgaaaagctccacagtctggagacctcctccacagca
gagaaggagaaaatgcgtaacgagctcaatcggctgcggggggtggacgaggaggccaag
accaaaaccaaacaggtgtcatcgctgcaggaggagttggagcggctgaggaaggagctg
agcacgacgcagcaggagaagaagaccatcgaggactgggctcagacatacaggagcgaa
atggagaaaatggtctcggagctgaaggatcagaatggtttgctgaagaaagacaaggac
gacttgaacaggtcgattcaggaacagagtcagcagatgacagagaaaatggctcgtgtg
atagcagaggagacacagcagctggagacggacctgaacgaggagcgatctcgctaccag
aatctcctgacagagcagcgtcgcctcgaggagaaatacgacgacctgaaggagaggact
ctggcctcgaacatttccaagcctggccacaggagaacagattccacccacagcagcaac
gaatcagagtacacctacaactcagagtacgccgaattggaagaaggttcccgtgccgct
gaagatgtgacacgaggaatagatacctcactgacactcaagctgcagaaacgtctcaca
gaactggagcaggaaaagcagtcgctgcgtaacgaactggaaaacaaagaggaccagttc
cagcgggctagagcgagggatgatgtagagtttaaaaaggctcgaggggcagagctggag
tacgagtcgctcaagcgccaggagctggagtcagagaacaagaagcttaaacataatctt
gctgagatgaggcaaagcctgctgggtgatgctgctacaaactccggggccccgggctcc
cctgcttacaaggtgctgctggatcagctcaactcctcctgtgaggagctggatgtccga
aaggaggaggttctgatccttcgctcacagctggtcagccagaaggaggccatgcaccac
aaggatgagaaggagaccatgacagagccgtctgtctatgtcgtggacgtgtctaagctg
aaagatgctgatgaaatcaaacaagcttatgttggcctcaaggacaccaacaggttactg
gagcaccagctgcagactcagcggagaggtcatgataatgaggtggaggcgttgcgcggc
gagctgcagaatgtcaaggaggagaacaatcgtcagcagcagctcttggcccagaacctc
caactgcctccggaggcccgaatcgaagccagtctgcagcacgaaatcacccggctcacc
aacgagaacctggaactcatggccgacgaccccacagcatccagagaggctcgagtcatc
attttacgacggatggttgatctcatggagcagctggagaagcaggaccgaaccatccgc
aagctaaagaagcagctgaaggtttactccaagaggattggagagatgggagccggtcaa
actgagggccagacgtctccaggacagatggtggacgagccgatccaccctgtcaacatt
cctcgcagggagaaagacttccaggggatgctggagtacaagaaggaagatgagctcaag
ctggtcaagaacctcatcctggaactgaagcctcgtggtgtggccgtgaatctgatccca
ggtctgcccgcctacgtcctgttcatgtgtctgagacatgctgactatgtcaatgatgac
cagaaggtccgcactctgctcacgtcaaccatcaacagtattaagaagatactcaagaaa
cgaggagatgactttgagacggtctccttctggttgtccaacacctgtcgcttcctgcac
tgtctgaaacaatacagtggagatgaggccttcatgaagcacaacacatcgaggcaaaat
gaacacactctgtccaacttcgacctggcggaatacagacaggtgatcagtgacctggcc
atccagatctatcagcagctgatcaaatgcatggagaacatcctccagcccatgatagtc
tctggcatgctggaacacgagaccatccagggcgtttcgggggtgaagcccacgggactc
cggaagcggacgtccagtattgcagacgagggcacctacaccctggactccatcctgcgg
cagctcagcgccttccactccaccatgtgtcagcatggcaccgatcccgagctgatcaag
caggtggtgaagcagcagttctacatcatcggagcagtcacccttaacaacctgctgctg
cgcaaggacatgtgctcctggagcaagggcatgcagatcaggtacaatgtgagccagttg
gaggagtggctcagagacaaaggtctgatgatgtgcggagccaaggagactctggagcct
ctgatccaggctgctcagctgctgcaggttaagaagaagacggacgaggatgctgaggcc
atctgctccatgtgcctggccctcaccactgctcagattgtgaaggtcctgaacctctac
actccagttaatgagtttgaggagagagtgtctgtctcattcatacgaacaatacagact
cgtttgcgggatcgctgtgagagtccccagttgttgatggacacaaagatgatctatcca
gtcaccttcccattcaacccttcctccctcgccctggaaaccatccagatccccggctcg
cttaacctgggcttcctcacccgcgtctaa
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integrated database retrieval system
