KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117758350
Entry
117758350         CDS       T07778                                 
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
  KO
K06241  laminin, alpha 4
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510  Focal adhesion
hhip04512  ECM-receptor interaction
hhip04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117758350 (lama4)
   04518 Integrin signaling
    117758350 (lama4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117758350 (lama4)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 EGF_laminin Laminin_I Laminin_II EGF_LMN_ATRN Laminin_G_3 DUF7630 JAG1-like_EGF2
Other DBs
NCBI-GeneID: 117758350
NCBI-ProteinID: XP_034435846
LinkDB
Position
24:20035455..20069209
AA seq 1880 aa
MAAKSLSCLCLLCILSVIAYPASAAGLGEQQQLLLKDCAKGFFLSEQNICLPCNCKGHAD
SCEDITGICIDCRDHSTGDFCEMCEDGHMLKPSMDRQHTCRPCACPLSVPSNNFAVRCDR
GSGILRCKCQEGYAGHLCERCAPGYYGNPMEIGNSCKRCDCNGNSDPNLIFNECHNMTGH
CQHCWGNTAGANCERCAPGFYGDAISAKNCRESVCNKCGTSSCDDRTGVCHCKPGVKGRL
CDQCEEGYSGFSSCQGCRRCECGPASIRSTCHPLTHSCPCRPGAGGRYCERCLPGHWDYS
PSGCQKCDCESGHCDMHTGECMSEAATVNLCNINCDECIWHLIGDLRESNKTLDQLKVGV
LNISTGAAANDRLKFYNYTAHRLQAQFQGWRNKSSAMKAQTGELEEATDAVVLEIKQLGE
SESVVMTLGKRLENETLETLTLADQLSTNLTDLNIRIEEMIHDWELYSVQQDVDPEVVRR
NTDKAQLMVTRMRKVDLSPREPVATDESTEAHDLLRRIRQLDKKLMVTEGRLSPVREILS
RFSTKLSDAETSLQKAAGNVQDTEDMNRANVLKFQRSEVKQLLLTEDHTAVNDTLEAAGG
FISDTERTVAEVDAMVQNVTEYHAAIDGASQSLTEKTERLSMADRDLVQRADEHAVELEK
QANELEEDLRASDANGFVQRAISAANVYNNIVKYIDDANITSLTTFNLSQRAEDVVEGIN
TQLGLLVTQSNNVFKESVSLHSEQSEVETEVIDKLKYIEETKETMDKNTKQLADLVQDIG
GIQRDGTAQRLEFTLEVAEGTLNHSAEVLQTITPISSKVEEWAKNMRNNDYSVAAYEEAV
SSAGETVETLNVLVPELLNKLRVVEEKKPVNNVTTNIMRIRELIAQARSVAKKVQVSMKF
NGQSSVEVHPHSNLEELKTVTTISLFIRVDPDKDPIEDRFILYLGDRNGRKDYMGLAIKN
DNLVYVYNLGGEDVEIPLSSKPVSQWPAVFNYIKVERLGRHGKVFLTVPSQSSTDEQKFI
QKGEAPGTDSLFDIDPKDIVFFVGGVPPDVKLPPPLSLAPFVGCIELASLNNDVISLYNF
KEAHKMDVVTSSPCPRYKLAFSQSRIASYLFDGTGYALINNIERRGKFGVVTRFDIAVRT
VANNGILFVMVNGDNYFLLELKNGFLRLMYDFGFANGPRVLENNLPKLQINDARYHELSI
IYHQSKKVILLVDKSHVKSLENPKTTLPFSDIYIGGAPSSILKSRPELSAGVGLKGCVKG
FQFQKKDFNLLEEPGTIGISSGCPEESFMSHKAYFTGESYLGSTGKISPCDSFEGGLNFR
TLQPSGLLFYHSEGSDEFSISLDNGAVVMNTRGTRVKSHKKQYNDGRTHFLVASVNNQKY
SLLVDDKDKQEKKRPSSATRPSSGSAVKTFYYGGSPSSSFKNFTGCISYAYINRQDRDIE
PEDFQRYTDKVQTSLQDCPVQRPPAALLSRQRENISRAKHGQSQQVTRDKSSLPLGLMEL
KSDDQEPSELNIEPCYLSSSPRASHQAFHYGGIANSRQHFTDLPDSLSERSHFSLSLKTY
SSFGLIFYVSDVQEDNFMALFLAQGKLVYTFNAAEQRVKIKSEEKYNDGAWHNVIFIRDG
RVGRLIIDGLTVLEDRVQESNISWHVNSPLYVGGVPPGRALKNVQRNSAYSFTGCLKNLQ
LDGLWLPSVTETFGVTPCFDGLSEAGTYFSEEGGYIVLDDSFNLGLKFELVMEVRPRVAS
GVLMHLFTDDGFITMYTHQGAVEVLVNDGTHEFSTKVSPRQGLCAGNWHRITVIRDANVV
QLDVDSEISHVVGPLNASSTDTRKPVFIGGAPDLFLPESLPTRKLYIGCMRNLTINNSPV
SLSKAAVVSGAVSVGTCPAA
NT seq 5643 nt   +upstreamnt  +downstreamnt
atggctgctaaatctctgtcctgcctttgccttctttgcatcctctcagtgattgcctat
ccagcttctgccgccgggctcggggaacagcaacagttactcctgaaagactgtgccaag
ggatttttcctcagtgagcaaaacatatgcttaccatgtaactgtaaaggccatgctgac
tcctgtgaagacatcactggcatttgtatagactgcagggaccacagtacaggcgatttc
tgtgaaatgtgtgaagatggtcacatgctgaagcccagcatggatagacaacacacctgc
cgaccttgcgcctgtcccctctcagtcccctccaacaacttcgcagtgcgctgtgacaga
ggaagtggcattctgcggtgcaagtgccaagagggctacgccggacatttatgtgagagg
tgtgcaccaggttactatggcaaccccatggagattggcaattcctgtaagaggtgcgac
tgcaatgggaattccgaccccaacctgattttcaatgagtgccacaacatgacaggccac
tgccaacactgctggggaaacaccgccggggccaactgtgagaggtgcgctccaggtttc
tacggcgacgccatcagtgccaagaactgcagagagtccgtgtgcaataaatgcggcacc
tcctcatgcgacgacaggacaggagtgtgtcactgcaaaccaggtgtcaagggtcgactc
tgtgaccagtgtgaggagggctactcaggtttctccagctgtcagggctgtcggaggtgt
gaatgtgggccagcttccattcgctccacctgccatcctctcacccacagctgtccgtgc
cgcccgggggccggcgggcgttactgcgagcgctgcctcccaggtcactgggactacagc
ccctccggctgccagaagtgcgactgtgagagcggccactgtgatatgcacacgggagag
tgcatgtcagaggctgcaacagtaaacctgtgcaacatcaattgtgatgagtgcatttgg
catctgattggggacttacgtgagtcaaataagacactggatcagctgaaggttggagtg
ttgaacatctccactggagctgctgctaacgacaggctcaaattctacaactacacagca
catcgattgcaggctcagtttcaaggctggagaaacaagtcatctgcaatgaaggcgcag
actggggagctggaggaggccacagacgctgtggtgttagaaatcaaacagctgggagaa
tcggagagtgtggtgatgactttggggaagaggcttgaaaatgaaacgctagagacccta
accctggctgaccagctcagtacaaacctcactgacctcaacattcgcatcgaagagatg
atccacgactgggagctgtacagtgttcagcaggatgtggacccagaggtggtcagacgc
aacacagacaaagcccagttaatggtgaccaggatgaggaaagtggacctgtccccacga
gagcctgttgccaccgacgagtccactgaggctcatgacttgctgaggcgtatccgtcag
ttggataagaagctgatggtcacagaaggccgactctcccctgtcagggagatcctctca
cgcttctccaccaagctatcagacgctgagacctctctccagaaagcagctggcaacgtg
caggacacggaggacatgaacagagccaacgtcctcaaattccagaggagcgaggtgaag
cagctgctgctgacagaggaccacactgctgtcaatgacacactggaggcagccggaggt
ttcatctctgacacagaaaggactgtggctgaggtggatgctatggtgcagaatgtgact
gagtaccacgcagcgatcgatggcgccagccaaagcctgacggagaagacggagcgtctc
tctatggccgacagagatctggttcagagggcagacgagcacgccgtggagctggagaaa
caggccaatgaactggaggaggatctgagagcgagcgatgccaacggctttgtacagaga
gccataagtgctgccaacgtctacaacaacattgtgaaatacattgacgatgcaaacatc
acctcgctcaccaccttcaacttgtcccaaagagctgaagacgtcgtcgaagggatcaac
actcagcttggactccttgtgacacagagcaacaatgttttcaaggaatctgtgtcatta
cactcagaacaatctgaggttgaaactgaggtgattgacaagctgaaatacattgaggag
accaaagagaccatggataagaacaccaaacagcttgcagacctagtgcaggatatcggt
ggaattcagagagacggaacagcacagcgtctggagttcaccctggaggtggccgagggg
acgctcaaccactcagcagaggtccttcaaaccatcacgcccattagcagcaaggttgag
gaatgggccaaaaacatgagaaacaatgattactctgtagctgcttatgaagaggccgtt
tcctctgccggagaaacagtggagaccctgaacgtgctcgtccccgagctgctgaacaaa
ctgagggtggttgaggagaagaagcctgtcaacaacgtgaccaccaacatcatgaggatc
agagagctcatagcccaggccaggagcgtggccaagaaagtccaagtgtccatgaagttc
aacggccagtcctcggtggaggtccaccctcacagtaacctggaagaactgaagacagtg
acaacaatcagcttgttcattagagtggaccctgacaaggatcccattgaggaccgtttc
atcctttacctgggagacagaaatggtaggaaagactacatgggtctggctatcaagaac
gacaacctggtgtacgtgtacaacctcgggggtgaagatgttgagatcccgctgagttca
aagcctgtcagccaatggcctgcagtcttcaactacatcaaagtagagaggctgggcaga
catggaaaagtcttcctgaccgtccccagtcagagctccacagacgagcagaagttcatc
cagaaaggcgaggctccaggcacagactcactgtttgacattgaccccaaggatattgtg
ttctttgttggtggtgtcccaccagatgtcaagcttcctcctcctctgagtctcgctcct
tttgtgggctgcatcgagttggcctcgctcaacaatgatgtgatcagtctgtacaacttc
aaggaggctcacaaaatggatgtggtgacatcatcaccatgccccaggtacaagttggca
ttctcacagagtcgcatcgccagctatctctttgatggaacaggctacgctctcatcaac
aatattgagaggaggggcaaatttggtgtcgttacgagatttgatattgcagtacgaacc
gttgcaaacaatggcatcctcttcgtcatggtcaatggggacaattacttccttttggaa
ttgaagaatggctttttgcgactaatgtatgacttcggcttcgccaatggaccaagggtt
ttggagaataatttaccaaaactgcaaataaatgacgcacgataccatgagttgtcaatc
atctaccatcagtcaaagaaggtgatcttgctcgtggacaaaagccatgttaaatcgttg
gagaatcccaaaaccacactgcccttctcagatatatacatcggtggggctccatcaagc
atcctcaaatccaggccagagctgtctgctggagtcggccttaaaggctgtgtgaaaggt
ttccagttccagaagaaagacttcaacctgctcgaggagcccggcaccattggcatcagc
agtggctgcccggaggagtcctttatgtcccataaggcctatttcactggagagagctac
ctgggatccacaggaaagatttcaccctgcgacagctttgagggaggactcaacttcaga
actcttcagcccagcggacttctgttctaccacagtgaagggtctgatgagttcagcatc
tccctggacaacggagcagtggtgatgaacaccagaggcacaagagtcaaatcccacaag
aaacaatacaatgatggaaggacacacttcttagtggcctcagtgaacaatcagaagtat
tctctgttggtggatgacaaagacaagcaggagaagaaacgtccgtcatcagccacaaga
ccctcatcaggctctgctgtaaagaccttctactacggagggtctccaagcagcagcttc
aagaacttcacaggctgcatcagttatgcttacatcaacagacaagaccgggacattgag
cctgaggacttccagcggtacacagacaaggtgcagacctccctgcaggactgtccagtc
cagcgcccccctgctgctctgctgtcaaggcagagggagaacatctccagggccaaacat
ggccagtcgcagcaggttaccagggataagtccagcctccctctaggcctgatggaactg
aagagtgatgaccaggagccatctgagctgaacattgagccctgctacctctcctcaagt
cccagagcgtctcaccaagccttccactacggtggcatcgccaacagcagacagcacttc
acagatctcccagactccctttcagagaggtcccacttctccttgtccctgaagacttac
tcatcctttgggctcatcttttatgtatctgatgtccaagaggacaatttcatggctctc
ttcttggcccaagggaagctggtatacaccttcaatgcagcagagcagagagtcaaaatc
aagagtgaggagaaatacaatgatggtgcatggcacaatgttatttttatccgtgatggg
agagtggggcgtttaataattgatgggctcacagtcctggaggacagagtacaggaaagc
aacatctcctggcatgtcaacagtcccctctatgtcggaggagttcctcctgggagagct
ctgaagaatgttcagagaaactcggcatacagcttcaccggctgtttgaagaaccttcag
ctggatggactgtggctgccctctgtgaccgagacgtttggggtcactccttgctttgac
ggactctctgaggcaggaacatacttctcagaggaaggaggatacatcgtgctagatgac
tcttttaacctggggctgaagtttgagctggtgatggaggtgcgcccccgtgtggcatct
ggggtgctaatgcatttgttcacagacgatggctttattaccatgtacactcatcaagga
gcagttgaggttcttgtgaacgatggaacccatgagttctccacaaaggtgtctccaaga
caaggtctgtgtgctggcaactggcacagaattacagtgatccgagatgccaatgttgtc
cagctggatgtggactctgagatcagccacgtggtgggacctctgaatgccagctccacg
gacactagaaagccagtgttcataggtggagctccagatctgttccttccagagagcctt
cccaccagaaagctctacattggctgcatgaggaacctgaccatcaacaacagcccagtg
agcttgagcaaagctgccgtggtcagtggggctgtcagcgtgggaacctgcccggcagca
taa

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