Hippoglossus hippoglossus (Atlantic halibut): 117758355
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Entry
117758355 CDS
T07778
Symbol
si:dkey-119f1.1
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117758355 (si:dkey-119f1.1)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117758355 (si:dkey-119f1.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Laminin_II
AAA_13
AAA_29
CENP-F_leu_zip
AAA_21
CC2-LZ
Tup_N
Crescentin
NPV_P10
DUF1664
FANCL_d1
Motif
Other DBs
NCBI-GeneID:
117758355
NCBI-ProteinID:
XP_034435854
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All DBs
Position
24:8726814..8736367
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AA seq
1102 aa
AA seq
DB search
MSKRKSSSVSENVNKRVRPVHGEEEEEEEEEEEEEETDENVGDDHDDPLLKHVPGAAEVV
SDAGIVESITLKNFMCHSLLGPFTFGSNVNFVVGNNGSGKSAVLTALIVALGGNAQATNR
GSSLKGFVKEGESSADVSITLRNKGRDAYKPEVYGPAITVDLKITREGMRTYKLRSKSGQ
LVSTKKEELMSVLDNFNIQVNNPVSVLTQEMSKHFLHSKGEGDKYKFFMKATQLEQMRED
FVYIKTTKQVTEDKVDQQNECLKDLKQKYREKEDRYKSLASLDEMHTKLEELQKQMAWAL
VTEMEKELDPMKEKLRSDRQSTEKYDEKVEEWKHKIEEAEKKYKQIQEQLEGITQQVQEL
QPKCADLKAEAQKHNTLLKSSEVPVNTCKTNLRDLERDKVQLSSRINDLKLSISQTSGAE
SQARMEHMEQIQSELENHRHQISTLGQQIDQYQNACSRAREEQSKIKREHDVLQRSIEAN
RRNSHTLESSRSNRLQRFGEQMPALLNGIQDAHNRGQFKYKPRGPLGYLISLKDPELALA
VEVCLKGQMLAFTCDNYADEKVLQDLMAKVCQRGRRPAIVTSQFLQHVHDTRTRAVNHPE
YPSVLQALEIEDPVVANCLIDQSGIESILLIKNRTEARRVMQGKNPPRNCNMAFSKEGDQ
IYNNRSYTAEQTRANRLSGDVEDEIRHLQREMENQTALATRIQQQIRNLDDDIKKNEGLM
RRAQADQKMTKAKATKLELELTDLQNMEEPQSEDLNPLEEELQEIVTKISSKRAEYDQAR
TQMTDLKASYEKAEREYKQHKEKINTIAEDADPIKEELSKADQEVMKCKHHKKHYDEKRS
THLRNIQTLEANLQSKEQEVQGSVSKASEICPERLEVRRTARSLDSEINRLKVKISTQQE
QQGDREEVVRQYHEALENYKNLTQQMKNLNSFIKSLDSVMNHRLQVYNELRRFLSARCKY
YFDSMLSQRGYTGSMSFDHKNETLSISVQPGQGNKADLRDMRSLSGGERSFSTVCFVLSL
WAITEAPFRCLDEFDVYMDMVNRRISMDMMLKVASGQRYRQFIFLTPQSMGTLPVSKIIR
ILRMKDPDRGQNNAPADQDADQ
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaggaagagcagctctgtcagtgaaaatgtcaacaaacgggtccgacctgtg
cacggagaagaggaggaggaggaggaggaagaagaagaagaagaagagactgatgaaaat
gttggagatgaccatgatgatcctctactgaagcacgtgccaggtgccgcggaggtggtg
agtgatgcagggatcgtggagagcatcacgctgaagaacttcatgtgccactcgctcctc
ggcccgttcacattcggttccaatgtcaactttgtcgtcggcaacaatggaagtggaaaa
agtgccgtcctgactgctctcatagttgctttaggtgggaatgcacaggccacaaacaga
ggatcatccctcaaaggttttgtgaaagagggtgaaagctcagccgatgtatcaattacc
ctacgtaacaaaggaagggacgcttacaaacctgaggtgtatggtccagccatcaccgta
gacctcaaaataacacgagaggggatgagaacctataaactgaggagcaagtcaggtcaa
cttgtctcaaccaagaaggaagagctcatgtccgtcctggataatttcaatattcaggtc
aacaatcctgtgtccgtcctcacccaagagatgagcaaacacttcctacactctaaagga
gagggggacaagtataagttttttatgaaagctacacagctggagcagatgagagaggac
tttgtctacatcaaaaccaccaagcaagtcacagaggataaggtggatcaacaaaacgaa
tgcttaaaagacctgaagcagaaatacagagagaaagaggatcgttacaagagtctggca
tctcttgacgaaatgcacactaaactagaggagttacagaagcagatggcgtgggccttg
gtgaccgagatggagaaggagttggacccgatgaaggagaagctacgctcagacagacaa
tctacagagaaatatgatgagaaggttgaagaatggaagcacaagattgaggaggcagag
aagaagtacaagcagatccaggagcagttggagggaatcacccagcaagtccaggagctt
cagcccaaatgtgctgaccttaaggctgaggcccagaaacataacactcttctcaagtcc
agcgaggtccctgtcaacacatgcaagactaacctgagagacctggaaagggacaaggtt
cagttgtcctcgaggataaatgatctcaagctgagcatcagtcaaacatcgggagcagag
agtcaggccaggatggagcacatggagcagatccagtcagaactggagaaccatagacac
cagatttccactttgggccagcagattgaccagtatcagaatgcctgcagccgtgccagg
gaagaacaatcaaagataaagagagaacacgacgtgctccagaggtccattgaagccaac
agacgtaactcgcacactctggaaagcagccgctccaatcggctgcagcgttttggagag
cagatgcctgcactccttaatggcatccaggacgcccacaataggggccagttcaagtac
aaacccagaggacctcttggttacctcattagcctgaaagacccagagctggccctggct
gtagaagtgtgtcttaaagggcagatgctggccttcacctgtgacaattatgcagacgag
aaggtgctgcaggacctcatggccaaagtatgccagagaggccgcagacctgccatcgtt
accagccaattcctccaacatgtccacgatacaaggaccagggctgtgaatcaccctgaa
tacccgtccgtgctccaagctctagagatcgaggacccagttgtggccaactgcctgatt
gatcaatcaggaatagaaagcattctactcatcaagaatcgcacagaggctcggcgagtg
atgcagggcaaaaaccctccgcgcaactgtaacatggccttctctaaggaaggagatcag
atctacaataaccgtagctacactgcagagcagaccagagccaaccgcctctcaggagat
gttgaggatgagatcaggcatttgcagagagagatggagaaccaaacagctctagcgact
cgcatccagcaacagattagaaacttagatgatgacatcaaaaagaatgaagggctgatg
agaagagctcaagcagaccagaagatgacgaaagctaaggccacaaaactagagctggag
ctgacggacctacagaacatggaggagcctcagtcagaggacctaaaccctctggaggag
gaacttcaggagatcgttactaagatctcgagcaagcgtgcagagtacgaccaggcccga
actcagatgactgacctcaaggcgtcctacgagaaggcagagcgggagtacaagcagcac
aaagagaagatcaacaccatcgcagaggacgccgacccgatcaaggaggagctgagtaag
gctgatcaggaggtgatgaagtgcaagcaccacaagaaacattacgacgagaagcgcagc
acccacctccgcaacatccagaccctcgaagccaacctgcaaagcaaggagcaggaagtt
cagggatctgtatccaaggcttcagagatctgtccagagcgcttggaagtgcgtcggaca
gccaggagtctggatagtgagatcaaccgtcttaaagttaagatctccacccagcaggaa
caacaaggagaccgcgaggaggttgtgagacagtaccatgaggctctggagaactacaag
aacctcacacagcaaatgaagaacctcaacagcttcatcaaaagcctcgacagcgtcatg
aaccacagactccaggtttacaatgagcttaggaggttcctctcagcccgatgtaaatac
tactttgacagcatgctgtcccagagaggatacactggaagcatgagctttgaccacaag
aacgaaaccctctccatctcggtgcagcccggccagggaaacaaggcggacctgagagac
atgcgctctctgtccggaggcgagcgctccttctccactgtttgcttcgtgctctctctt
tgggccatcacagaggcgcctttccgctgcctcgacgagtttgatgtttacatggacatg
gtgaacaggaggatatcaatggacatgatgctgaaggtggcgagtggtcagcgatacaga
cagttcatattcctcactccacagagcatgggtactcttcctgtgagcaaaatcatccgc
atcctgcgaatgaaagacccagaccgtggccaaaacaatgcaccagcagatcaagacgcg
gaccagtag
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integrated database retrieval system
