Hippoglossus hippoglossus (Atlantic halibut): 117758370
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Entry
117758370 CDS
T07778
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9 isoform X1
KO
K10649
tripartite motif-containing protein 9/67
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117758370
04121 Ubiquitin system [BR:
hhip04121
]
117758370
Membrane trafficking [BR:
hhip04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117758370
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117758370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
fn3
zf-B_box
ANCHR-like_BBOX
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
PRY
zf-RING_10
ARM_KNTC1_1st
Motif
Other DBs
NCBI-GeneID:
117758370
NCBI-ProteinID:
XP_034435874
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All DBs
Position
24:2960208..2999727
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AA seq
712 aa
AA seq
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MEEELKCPVCGSLFREPVLLPCSHNVCLACARNITVQTPEGETPVQSRASGSSDYDYLDM
DKMSLYSETDSGYGSYTPCQLKSPNGVRVFPPSAAHRHCSLTCPLCHRSVSLDERGLRGF
PRNRLLEAIVARYQQNRAAAAAAAAASSSSTAVKCQLCDRNPADAAVMCEQCDVFYCHSC
QQRCHPSRGPLAKHRLVPPRNPAAGGGAAGGGGGGGGTGGQQPPATARKPATCVDHEAEN
FSMFCCSCKAPVCVKCLEEGKHNKHDVKPLAVMWKQHKCQISQALNGVSEKAKDAKEFLV
QLKNMLQQIQEGGVEFEACLVAQCDSLIEALTRQKAKLLTKVTKEKEYKLKVVRDQITHC
TMKLRQTTGMMEFCLEVLKENDPSGFLQISDPLIKRVTSSQDQWVKGALEPKVGPDFDLT
LNTDSLMQTILQLDFCQGNAESGTSVPVAPLLQLEKCCTRNNSATLAWRVTAPPGSPIEG
YILELDDGNGGQYREVYVGKETVCTVDGLHFNSSYNARVKAYNAVGLGPYSKTVVLRTSD
AVAWFTFDPSSAHRDIVLTNENLTVSCNSYDDRVVLGTAAFSKGIHYWEVSVDRYDNHPD
PAFGVARINTMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRAEGGIAKGSTVGVLLDL
NKHTLTFFVNKEQHGPTAFANLEGVFVPAVSLNRNVQVTLLTGLDIPKNIKQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagttaaaatgtcccgtgtgcggttccctgttccgggagcccgtcctgctg
ccgtgctcccacaacgtgtgcctggcctgcgcccgcaacatcacggtgcagaccccggag
ggagagaccccggtgcagagccgagcctcgggcagctcggactacgactacctggacatg
gacaagatgagtctgtacagtgagaccgacagcgggtacgggtcctacaccccgtgtcag
ctcaagtcccccaacggggtgcgggtgtttcccccgtccgccgcccaccggcactgctcg
ctcacctgcccgctgtgccaccggagcgtgtccctggacgagcgggggctccggggcttc
cctcggaaccggctgctggaggccatcgtggcgcggtaccagcagaaccgcgccgccgcc
gccgccgccgccgcagcctcctcctcctccacggcggtgaagtgtcagctgtgcgaccgc
aacccggcggacgcggcggtgatgtgcgagcagtgcgacgtcttctactgtcactcctgc
cagcagcggtgccacccatcccggggtccgctggccaagcaccgcctggtgccgccgcgg
aacccagcggcaggtggtggtgcggcaggcggaggaggaggaggaggaggaaccgggggt
cagcagccgcccgccaccgcgcggaaaccggcgacctgcgtggaccacgaagcggaaaac
ttcagcatgttctgctgcagctgcaaagctccggtgtgcgtcaagtgtctggaggaaggg
aaacacaacaagcacgatgtcaaaccactggcggtgatgtggaagcaacacaagtgtcag
atctctcaggccctgaacggagtctctgaaaaggctaaagatgcaaaggagttcctggtc
cagctgaagaacatgctccagcagatccaggaggggggggtggagttcgaggcgtgcctc
gtggctcagtgcgactcgctgatcgaggcgctgaccagacagaaagccaaactgctcacc
aaggtcaccaaggagaaggagtacaagctgaaggtggtgcgtgaccagatcacccactgc
accatgaagctccgtcagaccacaggcatgatggagttctgtctggaggtcctgaaagag
aacgaccccagtggattcctgcagatctcagaccccctgatcaagcgggtgacgtcgtcc
caggaccagtgggtgaaaggggccctggagccaaaggtcggccccgacttcgacctcacc
ctcaacaccgactcgctgatgcagaccatcctgcagctggacttctgccagggcaacgct
gagtctgggacttctgtgccggtggcgccgctcctgcagctggagaagtgctgcaccagg
aacaacagcgccacgctggcctggagggtgacagcgccccctggaagccccatcgagggc
tacatcctggagttggacgacggcaacggaggacagtacagggaggtttatgtggggaag
gagacagtgtgcacggtggacggcctccatttcaacagctcctacaacgccagggtgaag
gcctacaatgccgtcggtttggggccgtacagcaagacagttgtgctgaggacctctgat
gcagtggcctggttcacctttgacccgtcctcggctcacagggacatagttctgaccaac
gagaacctcaccgtctcctgtaacagctacgatgaccgcgtggtgctggggaccgctgcg
ttctcgaagggcatccactactgggaggtcagcgtcgatcgctatgacaaccacccggac
ccggcgttcggcgtggcgaggatcaacaccatgaaagacatgatgctggggaaggacgac
aaggcgtgggccatgtacgtggacaacaaccgctcctggttcatgcacaacaactcccac
accaacagggcggagggcggcatcgctaagggctcgaccgtgggcgtcctgctggatctg
aacaaacacactctgaccttcttcgtcaacaaggagcagcacgggccgaccgccttcgcc
aacctggagggcgtcttcgtgccggcggtcagcctcaacagaaacgtacaggtgacctta
ctcacgggcctggacattccaaagaatatcaaacagtag
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