Hippoglossus hippoglossus (Atlantic halibut): 117758533
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Entry
117758533 CDS
T07778
Symbol
srsf5b
Name
(RefSeq) serine and arginine rich splicing factor 5b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117758533 (srsf5b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117758533 (srsf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117758533 (srsf5b)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
SR proteins
117758533 (srsf5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
117758533
NCBI-ProteinID:
XP_034436174
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All DBs
Position
24:4363528..4369699
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AA seq
313 aa
AA seq
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MSGCRIFIGRLAPTAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCSERVTIEHARVRLRGGRGRGGSSSSGGGGGRDGGGGGGGGGGGGRFSDRYGRGSQNS
RSRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSD
LKNALEKLSGKEINGRKIKLIEAAKKRSRSRSRSDSTSRSRSRSRGRSPSRSPRRSRSPA
KAHNRSRSRSRSGSPAGSPKSPTPKSKEAAKRCSKTSKSATPPSPRPAQRASVSRSRSRS
RSRSRSPSTDSQR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtatcttcatcggccgcctggcccccacggccagagagaaggacgtg
gagaggttcttcaagggatacggccgcatccgagacatcgacctgaagaggggcttcggc
ttcgtggagtttgatgatcccagagatgctgaagatgccgtgtatgagcttgatggcaaa
gagctgtgcagtgaaagggtgaccattgagcacgcccgcgttcgtctgcgtggcggccgt
ggcagaggtggcagcagcagcagcggcggtggtggtggtagggatggtggtggtggtggt
ggcggaggaggaggcggtggacgcttctctgatcgctatggtcgaggttcccagaacagt
cggagtcgaaaccctcctccgatgcggacggaaaaccgcctgattgtggagaatttgtcc
tctcgcgtcagctggcaggacctgaaagatttcatgagacaagctggagaagtgacattc
gcagacgcacatcggcccaaactcaacgaaggggttgttgagtttgcctcttacagcgac
ctgaaaaatgcccttgagaaactgtctggaaaggaaatcaatggcaggaaaatcaagctc
atagaggcagccaagaagaggtccagaagtcgttcccgatctgatagcacctctcgctcc
cggtctcgttcccgcggtcgctctccctcccgttccccccgacgctcccgcagccccgcc
aaggcccacaaccgatcccgctcccgcagtcgcagtggctctcctgccggcagccctaaa
tcccccacgcccaaatccaaggaggccgccaagcgctgctccaagacgagcaagtctgcc
acgccaccctcccctcggcccgcccagagagcctcagtttcccgttcacgctctcgttcc
cgctcccgctctcgttccccctctaccgacagccagcgctaa
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