Hippoglossus hippoglossus (Atlantic halibut): 117758616
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Entry
117758616 CDS
T07778
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117758616 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117758616 (rev3l)
Enzymes [BR:
hhip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117758616 (rev3l)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
117758616 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
Motif
Other DBs
NCBI-GeneID:
117758616
NCBI-ProteinID:
XP_034436335
LinkDB
All DBs
Position
24:20220684..20284727
Genome browser
AA seq
3045 aa
AA seq
DB search
MFAVRIVTADFYLARPVKDLDVCYSDFRESDVKRVPVVRIFGSTPAGQKTCLHIHGVFPY
IYVPYDGYGQQSERYLRQVAFSIDRAINVAMGNPSSSIQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLFNPQMVKRVCELLQSGAVMNKSYQPNEGHIPFLLQFFIDYNLYGMNLVNLGAV
KFRRSPNKVAPDRQTSSSGPRISPWKSPCTSKLNDSTLGGTFVRWEENALPCSLVLEEVE
KQSTCELEVDAVAVDVLNRLEIENQIGRNPGLQAIWEDERLRRREKNQATQIETPESQDR
GSVTSTESEKIFMKRFKEILKENEFDVTQASSMADEEEDQEDFLADLTLHSDDLTPEGLP
CTPANAVEVHRDSQPDSVRSSGKIPEEAVVDEEAILSLLENSQTFLPLSQTSNHSPLLDS
SQDHAIIDLLAGLEDDGFSIGQNSQFLPGARSYHCNSDEEEESPELDKEEAELSMIMSQR
WDNKAPESSSLPRPGVKEAEDGFSEEQQDSSDEDMEWSGNNSLFANLSIPQLDGAADESS
DSSLTESSPRSQSSLIVTEKMLGKRNPFPGETVCLEPPSSAKILLECKHPEHRPVHMLDT
EQPLDKHFQSKSCQDSSSECSTGFKVNKGIPYIPPVKHPIPCKIVNHPEVSPICVNKEDM
RPIYSYDKEPSIALDNTDLESFPFGNGKVAKSRKKYDSIKNVETNCLSILQNHRTFSLCY
SELRNCSLKTDLELSQKDNKSPIIRNMSSAPSPMEEDEFLDPQQEEMGQDSEEGDVGELK
IRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLSRKKVGNKKLTPADSCSKLVEAQPR
RSRLKVTKKRLGMTGQKNTFNIVESSTSDSQITTSFTSNTSACTQTVDTEMPNSDEKSNE
AEPLKDGLITDEKPNTEDEPETNEKCIDERTEQFSQPPATNSATVSCFSEESREAAEDRL
SPFLDNVTYTTPSALPGSKYTLRAKRKMIYDSEDGEQSSSIPSKNAASVKGSKLKGSNVC
SGPEVKYQKRCKKEPPVIIKYIIINRFKGQKNMRVKMSKINPEEQLVLLTPDKLQLYNKM
APLRDFWPKVPESTAVRFPIIEPKAKKQPKRKAKVNSTSKKTFSISTKPKVRMGESVKRT
KGCQRGPILSSLLPPRPSYCEQVDDQDIEYTDVMAELGYLSDRSPSPTDSTPPRCWSPSD
PFMDSSKQLINPLSDPSLSSTFPKSSTVSSNKRAQNKCRTVRSKKAADSKRKISKSVTKP
PEEQEPQKEKLRQRNVGAPRQNKKAKDVAEGTVNSSTTTTKPKRSRKKKPEEPKSHELSK
DSSQLLFPEDDLPPSENSSQEVTSFQQPVSTDCNNQGTSQPTSTSDSNSVAQSLEPKVED
YETSITEVNQSFSPPVQLKQQSCQTTVVKAEASQEECTAPTPPLLGRLLPEDNKDPQPAV
TSPHSGLKNGETPPLHENPSGLAVLKQLLQKRQQAQTLPLQVVGTESHYTAIAQAAALLD
PTTKPAKTRKAPSTTNRKPRVPKSTTPKDKKPRIRRSKMSNTQPNVPDKDSMSDDYPLIM
SDPGLDTCNLIEDSLSPELPHNYNFDINAIDQTEFSSPYSGSQFVLTDKNLPVKFLSDVS
QEAVSAQTLDIEKNNDRLFGYGDELQRISDWHKARPASPDLFDRSENRVPVTNHLTFLDS
ERIKSKEWDFSLCKAQTLSPFQDFHCERKELLFSVFDPVLPLPLSSASFLDHEGSPTGEF
LEGTDGLTSTTPSSSPRSIGSVSQVRASQLPRGAGGGAHILKPLMSPPSREEIFNTLLDL
EISEATFQEPFCSDPSDAPGKPMEVGGRKLTVGTRLAKELSEFSGDLSLEGLHFWKTAFS
VMTHPPTTITSSSQAQGAEPSVASKDQAESDPSSASDKKVILLPCKNPPNREHVCQWLEA
KKQYECLQKWRRDTGLLNNDRAGLNVEEENPENSVQPSASCCSAVKFELCGNLSSIRSQR
RKKRSLSLIMSPMKNTGCLSKSSEESPVSDEGAVDLEREEEQGKDTDDDDDDDNKASSPE
SPELPPWQQSCQPSPSGPEQLSEKRESENSPEPLSPRLSNSLERLGDNYSLSPLHRSNMD
EGRMSPHLLHSTPFLRRRQRREERLELVCSTPISEENPISERLQQKRRSQTGALRRVLLT
TQIQNQFAALNVPKKETSQIEGPSIANSYGFKVSMQNLQDAKALHEVQYLTLMGMELHAR
TRRDLEPDPEFDPICALFYCLSSDVPLQSIESTVLTGAIVVDKDCQNCDQGDKRTAPLLV
RSGVSGLQVKYATDEKMLFQELISIMRRYDPDILLAYEVQMRSWGYLFQRAAVLGVGLCQ
QLSRVPGDSVENRFTADRDEYGADTMTEINIIGRITLNLWRVMKTEVTLNNYSFENVAFH
VLHQRFPLYSPRTLSDWFDHNTDLYRWKMVDHYVSRVRGTMQLLQQQDIIGRTSELARLF
GIQFYHVLTRGSQYRVESMMLRVAKPLNYIPITPSIQQRAQQRAPQCIPLVMEPESRFYS
NSVVVLDFQSLYPSIVIAYNYCYSTCLGHMDSLGTPDEFKFGCTSLRVPPELLYQLRNDI
TVSPNGIAFVKSSVRKGVLPSMLEEILNTRIMVKQSMKSYKQDKALMKLLGARQLGLKLI
ANVTFGYTAANYSGRMPSVEVGDSIVHKARETLERAIKMVNDTKKWGARVVYGDTDSLFV
LLKGATKEQAFKIGNEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYESLDQKE
PVFDAKGIETVRRDGCPAVSKILERSVKLLFETRDISQVKQFVQRQCVKVLDGRASMQDL
TFAKEYRGTGSYRPGSCVPALELTRRMMVHDRRLEPRVGERVPYVVVYGMPGLPLIQLVR
RPMDVLQDPSLRLNATYYITKQILPPLARMFQLIGVDVFSWYQELPRIQKASCSAAAGGE
EAGRKGTISQYFTTLHCPVCDELTQLGVCSRCRAEPQRVAVTLYQDIRQWESQQDQLLKV
CRNCSGCAERQVPCVSLDCPVLYKLARVNRQLSKAPYLRQLLEQF
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggtgcgcatcgtcaccgcggacttctatctggcgagacccgtgaaggacctg
gacgtgtgctactctgacttcagggagagcgacgtgaagagagtgccggtggtgcggata
ttcggatcaacgcccgcaggtcagaagacatgtcttcacattcatggtgtgttcccttac
atctacgtgccatacgatggctacgggcagcagtcagagcgctacctgcggcaggtggcc
ttcagcatcgacagggccatcaatgttgccatgggaaacccatcctccagcatccagcat
gtcttcaaagtggtgctggtctctggcatgcctttctatggctaccacgccaaagagaag
cacttcatgaagatctatctgttcaatcctcagatggtcaaaagggtgtgtgagctgttg
cagagtggtgcagtgatgaacaaaagttaccagcccaacgagggccacatccccttcctg
ctgcagttctttatagactacaacctgtacggcatgaacctggttaacttgggagctgtc
aagttccgcaggagcccgaacaaagtagccccagacaggcagacgtccagcagtggtccc
agaattagcccctggaagagcccctgcacctccaagctcaacgacagcaccctggggggc
acgtttgtccgctgggaggagaatgccctaccctgctcattagtcctggaagaggtggag
aagcaaagcacttgtgagctggaggttgatgctgtagctgtagacgtcctcaaccgcctg
gaaattgaaaatcagattggcaggaaccccggccttcaggctatctgggaggatgagagg
ctgaggaggagagagaagaaccaggccacccagatagaaacccctgagtcacaagatcgt
ggttccgtcacttcaacagagagcgagaaaatcttcatgaagaggtttaaggagatcctg
aaagagaacgagtttgacgtgacacaagcttcatccatggctgacgaggaggaggaccaa
gaggattttctcgctgacctcactctccattcagatgacctgactccagagggactaccc
tgtacccctgctaacgctgtggaggtgcacagggactctcagccagactcagtgagaagc
agtggtaaaatccctgaggaggctgtggttgatgaggaggccatcttgagtcttctggag
aacagtcagaccttcctcccgctctcccaaacgtccaaccactcacctctgttagacagc
agccaagaccatgccatcatcgacctgctggcaggcctggaggacgatggtttctccatc
gggcagaattcccagtttctacctggtgccagaagttaccactgcaacagtgatgaggag
gaggaaagtccggagttggacaaagaagaggcagagctcagcatgattatgtcacaacga
tgggacaacaaggcccctgagagttcatcattaccaaggccgggtgtgaaggaggcagag
gacggcttcagtgaggagcagcaggattcctctgatgaagacatggaatggagtgggaat
aactctctgttcgccaacctgtccattccccagctcgacggggcggcagatgagagcagc
gattcatccttaacggagagtagtccgaggtcccaatcgtctctcatagtcacagaaaag
atgcttgggaaaagaaatcccttccctggggagacagtctgcctggaaccaccttcttcg
gctaagatccttctggagtgcaagcaccctgagcacagaccagttcatatgctggacaca
gagcaacctcttgacaagcactttcaatcaaaaagctgccaggatagcagtagtgaatgt
tcaacagggttcaaggttaataaaggaatcccctacatcccaccagtcaagcaccctatc
ccctgcaaaatagtcaatcaccccgaggtgtctcctatctgtgttaacaaagaggacatg
cgtcccatttactcctatgacaaggaaccctctatagccttggataatacagatctagaa
agtttcccatttggtaatggaaaggtggccaaaagtaggaagaaatatgacagcataaag
aatgtagaaaccaactgtctctccattcttcagaaccacaggaccttctctctgtgttac
tcagagctgagaaactgctcattgaagacagatttggagttaagccagaaggacaataaa
agccccatcataaggaacatgtcctcagccccgtcacccatggaggaggatgagttcctt
gatcctcagcaggaagaaatgggccaggacagtgaggagggagatgttggtgaactcaaa
atcaggtacgaggactatcaggaaaataagacggagaggactattgtggcccagcaggaa
gcacactacaagttctttcccagtgtcatcctctcaaactgcctcagtaggaagaaagtt
gggaacaaaaagttgactcctgcagattcctgcagtaaactagtagaggcccagcctcgc
aggtctaggctaaaagtgacaaaaaaaaggttaggaatgacaggacaaaagaatacattt
aacatagttgaaagctctacctctgacagccagattaccactagcttcacctcaaacacg
tctgcttgtacacagactgtggacacagagatgccaaattcagatgaaaagtcaaacgag
gctgagccactgaaagatgggctcatcacagatgaaaagccaaacacagaagatgaacca
gaaacaaatgagaagtgtatagatgaaaggacagagcagttttcacagccgcctgccacc
aactccgccactgtttcctgtttttctgaggagagtagagaagctgcagaggataggtta
agcccatttctagataatgtcacctataccacaccttcagcccttcccgggagtaaatac
actctgagggccaaacggaagatgatttatgacagtgaggatggagaacaatcaagttca
attccttctaaaaatgcagcttcagtcaagggtagcaagctcaagggcagcaatgtctgc
agtgggccggaagtaaaataccagaaacggtgcaagaaagaaccccctgtcatcatcaag
tacattattatcaacaggtttaaaggacagaaaaatatgcgggtgaaaatgtccaaaata
aatcctgaggagcagttggtgttgctgacaccagataagctacagctgtacaataaaatg
gctcctctcagagatttttggcccaaggtgccagaatccactgcagtcaggtttcctatc
attgagccaaaggccaagaaacagcccaaaagaaaagcaaaggtcaactccaccagtaag
aaaacattcagcatctccactaaacctaaagtcaggatgggggaaagtgttaaaaggact
aaaggttgtcagcgaggcccaattctatcctctctactaccgcccaggccgtcttactgt
gagcaagttgatgaccaggacattgagtatacagatgtcatggccgagttgggttacctc
tctgatagatccccaagccctacagactcaactcctccacgttgttggtccccaagtgac
ccttttatggacagctccaagcagctgataaacccactcagtgacccgtctcttagttct
acttttccaaagtcaagcactgtgtcttcaaacaaacgagcacaaaataagtgtagaact
gtcagatctaagaaagccgcggatagtaaaagaaaaattagcaagtcagttactaagcct
ccagaggaacaagagccccaaaaagagaagctaaggcaaaggaatgttggtgctccaagg
cagaataaaaaggctaaagatgttgctgaaggtacagtcaacagttctacaactactaca
aaacctaaaaggtctcgcaaaaagaagcctgaggaacccaaaagtcatgagttaagtaaa
gacagctcgcagctccttttcccagaagatgacctccctccctctgagaactcctctcag
gaggtcacttcatttcagcagccagtgagcacagattgcaacaaccagggcacttcccag
ccaacatctacatcagactccaattcagttgctcagtcattagaaccaaaggttgaggac
tatgagacttcaataacggaagtaaaccaaagcttttcaccacctgttcagctgaagcaa
caaagttgccagaccactgtggtaaaggcagaagcctcacaggaggagtgcacagctcct
acacctcctctgcttggtcgacttttaccggaagacaataaagatccccaaccagcagta
acctccccacactcaggccttaaaaatggggagaccccaccacttcatgagaacccttct
ggcttggctgttctcaaacagcttctccagaagaggcagcaagcacagacccttccccta
caagtggttggtacagagagccactacactgccatagctcaagctgcggcactactagat
cctacaactaaaccagctaaaaccagaaaagctccctccaccactaatcgtaaaccaagg
gtcccaaaatctaccacccctaaggataaaaagcccagaattaggagaagcaagatgagc
aatactcagccaaatgttccagacaaggacagtatgtcagatgactaccccctcattatg
tcagacccaggtctggacacctgcaacttaatagaggacagcttgtcaccagagctccca
cacaactataactttgacataaatgctattgatcagacggaattctccagcccttatagt
ggtagccaatttgtcctgactgataaaaacttaccagtgaagttcctaagtgatgttagc
caggaagctgtatcagctcagacactggacattgagaaaaacaatgataggttgtttggt
tatggagatgagctccaaaggatttctgattggcacaaagcaaggcctgccagtcctgac
ctctttgatagatctgagaacagggtgcctgtaactaatcacctcacatttcttgactct
gagagaatcaagagcaaagagtgggacttctctttatgtaaagcccaaaccctcagcccc
tttcaagactttcactgtgagagaaaagagctgctcttctcagtttttgatcctgtccta
ccactacctttaagttcagcatcctttcttgaccatgagggctcaccaacaggggaattt
ttggaaggcactgacggactcacctccaccacacctagtagctccccccgatccatcggc
tcagtgtcccaggtgagggcaagccagctgccacggggggcaggaggtggagcccacatt
ctcaagcccctcatgtcccctccaagccgggaagagatctttaacactctgctggacctg
gagatatcggaggctaccttccaggagcccttctgcagcgacccgtctgatgcccctggg
aaaccaatggaggttggtggccgtaaactaacggtgggtaccagactggcaaaggagcta
tctgagttcagtggagacctgtctttggagggcctccatttctggaaaacagccttctca
gtcatgacacaccctcccaccactattacctcatcttcccaagcccagggagctgaaccc
tcagtggcaagtaaagatcaggctgagtctgacccttcctcagccagtgacaagaaggtc
attctcctgccttgcaaaaacccaccaaaccgagagcatgtgtgccagtggctggaagcc
aagaaacagtacgagtgtttacaaaaatggcggagagacacagggctgctgaataacgac
agggctgggttgaatgttgaggaggaaaacccagaaaattccgtgcagccgtcagcttcc
tgctgctctgcagtgaagtttgagctgtgtgggaacctttccagcatcagaagtcaaagg
agaaagaaaaggagcctgtccctaatcatgtctcctatgaagaacacaggctgtctaagt
aaatcctcagaagaaagtccagtttcagatgaaggtgctgtggatcttgagcgggaggag
gaacaaggaaaagacactgatgacgacgacgatgatgataataaagcttcatctccagag
tcaccagagctgcctccatggcagcagtcctgtcagcccagcccctcaggcccagagcag
ctcagcgaaaaaagggaaagtgaaaactctccagaaccactgtcaccgaggctctctaac
tccctggagagactaggagacaactacagtctctcaccccttcatcgtagtaatatggac
gagggaaggatgagtccacatcttcttcacagtacccccttcctaaggaggagacagaga
agagaggaaaggttggagctagtgtgcagtacgcccatatctgaggagaatcccatttct
gagagactccagcagaagaggagaagccagacaggcgccctgagaagagtgttgctgacc
acacagatacagaaccagtttgctgctttgaatgtgccaaagaaagagacctctcagatt
gaagggcccagcatagccaactcctatggcttcaaagtcagtatgcagaacttgcaggat
gccaaagctctgcatgaggtccagtacctaacactgatgggcatggagctccatgcaagg
acccgccgtgacctcgaacccgaccctgagttcgaccccatatgtgccttattctactgc
ctcagttctgatgttcccctgcagagtatagaaagcaccgttctaactggtgccattgtg
gtggacaaagattgtcaaaattgtgatcaaggtgacaaacgaacagcgcccctgctggtc
aggtcgggcgtctctgggctgcaggttaaatatgccaccgatgagaagatgctgtttcag
gagctgatttctataatgaggaggtatgaccctgatatcctgctggcatacgaggtgcag
atgcgttcctggggctacctgttccagcgggcggcggtgcttggtgtgggcctatgtcag
cagctgtcacgtgtgccaggtgactccgtagagaaccgcttcactgcagacagggacgag
tacggagccgacaccatgactgagatcaacatcatcggacgcatcaccctcaacctgtgg
agggtgatgaagactgaggtgacattgaacaactacagttttgagaatgtggctttccat
gtgctccaccagcgcttccccctgtacagcccccgcacactgtctgactggtttgaccac
aacacagacttatacaggtggaagatggttgaccactacgtgagcagagtgcgcggcacc
atgcagcttctgcagcagcaggacatcatcggcagaaccagtgagctggcaaggctgttc
gggattcagttctaccatgttctgacccgaggatcccagtaccgcgttgagtccatgatg
ctacgtgtggccaagcctctgaactacatccccatcacacccagcatccagcagcgagcc
cagcagagggcgcctcagtgcatcccactggtgatggagcctgagtcgcgcttctacagt
aactcggtggttgtgctggacttccagtcactctatccctccattgtcatcgcatacaac
tactgctactccacctgcctgggccacatggacagtctgggaacgcctgatgagtttaag
tttggctgcacctctctgagagttcctcctgagcttctctaccagctccgcaacgacatc
actgtgtcacccaatggcatcgccttcgtcaagtcctcagtgcgtaaaggagtcctgccc
agcatgctggaggaaatcctcaacacaaggatcatggtgaagcagtcaatgaaaagctac
aagcaggataaagccctcatgaagctgcttggtgcccgacagcttggactcaagctcatt
gccaacgtcaccttcggctacactgcagccaactactctggccgcatgcccagtgttgag
gttggagacagcatcgttcacaaagccagagaaaccctggagagagccatcaaaatggtc
aatgacacgaagaaatggggagcgcgtgttgtgtatggtgacacagacagcctgtttgtt
ttgctgaagggagccaccaaagagcaggcgtttaagattggcaacgagatcgctgaggca
gtgactgcaaccaatcccaaacctgtcaagctcaagtttgaaaaggtgtacctcccctgt
gtactgcagacaaagaagcgctacgtgggatacatgtatgaaagcctcgaccaaaaggaa
cccgtgtttgacgccaaagggatcgagacagtgcgccgcgacggctgccccgctgtttcc
aagattctggagcgttccgttaagctgctgtttgagacgcgggacatcagccaggtgaaa
cagtttgtgcagcgtcagtgtgtgaaggtcctggacggtcgggccagcatgcaggacctg
accttcgccaaggagtacagaggcactggctcgtaccggcccggatcctgcgtccctgca
ctggagctcaccaggcgtatgatggtgcatgaccgtcgactggagccccgtgtgggggag
cgggtgccctacgtggtcgtgtacgggatgcccggcttgcccctcatccagctggtgcgt
cggccgatggacgttctgcaggaccccagcctccgcctcaacgccacctactacatcacc
aagcagatcctgccgccgctggcccgcatgttccagctgatcggagtggacgtgttcagc
tggtaccaggagctgcccaggatccagaaagcctcctgctctgcagctgccggaggagag
gaagcagggaggaagggaaccatttctcagtacttcaccacgctccattgccccgtgtgt
gacgagctgacccagctgggcgtgtgctcgcggtgccgtgctgaaccccagagagttgct
gtcacactctaccaggacatcaggcagtgggagagtcagcaggaccagctgctgaaggtc
tgcaggaactgcagcggctgtgcagagcggcaggttccctgtgtgtccctggactgtcct
gtcctttacaagctggcccgggtcaacagacagctctccaaggccccctacctccgacag
ctgctggagcagttctga
DBGET
integrated database retrieval system
