Hippoglossus hippoglossus (Atlantic halibut): 117758679
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Entry
117758679 CDS
T07778
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117758679 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
Other domain-containing proteins
Patched domain-containing proteins
117758679 (ptchd4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
DUF7041
Motif
Other DBs
NCBI-GeneID:
117758679
NCBI-ProteinID:
XP_034436436
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All DBs
Position
24:complement(17688248..17722029)
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AA seq
925 aa
AA seq
DB search
MCFIGGNGASASWILWRMLRQVIHRGLKASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPETDLEVLVAPTHSLAKIERSLANSLFPIDQSKHKLYSDLHTPGRYGRLILLAKS
GGNILELADQVLQVHKQVLDLRVNYKGFNYTFAHLCVLSHRDKRCLLDDIITIFEDIRQA
VLSNSTFHKVPVSYPNTTLKDGRVSFIGHQLGGVSYSPNSRDQQVKFARAVQITYYLRNH
GPVVQDAIAERWENEFGALVSRLSTAEAPHASDQLHIQSLTSFSLWRDFHQTGVLAKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNVVNLLASNSPSVSYALTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNVSASTKGDFITILKGSFLRSPEYQHFTEDIIFSKN
RETDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCVPHLYTFVLANEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTVLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREREREEIECIEVRENPDHVTNV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggaaacggggcatctgcaagctggattttgtggaggatgctgcgg
caagtgatccacagagggctcaaggcttcgttctactggctgggcttattcgttagcagg
caccccgtgttcttcctcaccgtccccgcggtcctcaccatcattttcggatctaccgtg
ctcagccgattcaagccggagacggacctggaggtgctggtcgccccgacgcacagcctc
gccaagatcgagcgcagtctcgccaacagcctgttcccgatcgaccagtcgaagcacaag
ctgtactcggatttgcacaccccgggcagatatggcaggctgatcctgctcgccaagtcc
ggggggaacatcctggagctggccgaccaggtcctgcaggtccacaagcaggtgctggat
ttacgcgtcaattacaaggggttcaattacacgttcgcccacctctgcgtcctgagccac
cgggacaagcgctgcctgctggatgatatcatcaccatcttcgaagacatcaggcaggct
gtgctctccaacagcactttccacaaggtgcccgtgagctacccgaacaccacactaaag
gatggccgtgtgtccttcatcggccaccagctgggcggcgtgtcctattcacccaacagc
cgggaccagcaggtcaagtttgcccgtgcagttcaaatcacctactacctccgcaaccat
ggacctgtggtgcaggatgccattgccgagcgctgggagaatgagtttggtgccttggtc
agccgactgtccacggccgaggctccccacgcttccgaccaactccacatccagtcactc
acctccttcagcctgtggcgggacttccaccagacgggcgtgctggcaaagggggaggtg
ctggtcagcctggtgctggtgctcctggccgccaccatctccagctccatgagggactgc
ctgagggggaagccgttcctgggcctcctcggcgtactgaccatctgcatcgccaacgtg
accgccgcagggatcttctttatatcagacgggaagttcaactctacgctgctggggatc
ccgttctttgccatgggccatggaaccaaaggagtgttcgagctgctagcaggctggagg
agaacgagggagaacctccccttcaaggaacgcgtggcggacgcttttgctgatgtgatg
gtgtgctacaccatgacaagctcactctacatcatcacctttggcatgggagcgagccct
tttaccaacatcgagtctgtgaaaattttctgtcagagcatgtgcgtagccatactcgtc
aactacttctacgtcttctcgttctatggctcctgcctggtgttcgctggacagctggag
cagaaccgctaccacagtgttttctgttgtaaaatcccctcagtggagtatctggaccgc
cagcccacatggtttaaaactatgatgagtgacggccatgacctgtccacgcaccacgac
agtgtaccctaccagaatcacttcatccagcacttcctgcgagagcactacacagagtgg
ataaccaatacttatgtaaaaccctttgtggtcattctctatctcatctacgcctctttc
tcattcatgggatgtttacaaattagcgatggatcaaatgttgttaacctgctggcaagt
aactctccgagtgtctcgtatgctctaacccagcagaaatactttagcaactacagccct
gtgatcgggttttatatttacgagcccattgagtattggaactccacggtgcaggagcac
ctgaagactcttagtcacggcttcaacaagatctcctggatggacaactttttccactac
ctgcgggtggtgaatgtgagtgcgtcaactaagggcgacttcatcaccatccttaaaggc
tccttcctgcgcagcccggagtaccagcacttcactgaggacatcatattctcaaagaat
cgtgagactgacgagtatgatataatcgcctcacggatgtacctggtggcgcggacaact
gagaagaagcgtgaggaagtggtggagctcctggaaaagctccgtccattgatgcttatc
aacagcattaagttcattgccttcaatccaacatttgtgttcatggaccgctacagctct
tctgtcatctcccccatcctgacctcaggcttcagtgtgctcaccatcctcatcctcact
ttcttcctggtcatcaaccccttagggaacttctggctcatcctcacagtaacgtctgtg
gaactgggcgtcttgggtttgatgaccctttggaacgttggcatggacagcatctcaatc
ctgtgccttatttataccctcaacttcgccatggatcactgtgtaccacacctgtacacc
tttgtgctggccaacgagcacactaggacgcagtgcatcaagttggcactggaggagcac
ggggctgccatcctgcagaacacatcctgcttcgtgatcgggatcatgcccctggtgttt
gtgccttccaatctgacctacacactgttcaagtgctccctcctcactgcaggctgcact
gtgctgcactgcttcgtcatcctgccggtcttcctgaccttcttcccaccatccaaaaag
agacacaagaaaaagaaacgggccaagcggaaagagcgggagagggagagagagcgggaa
agggagagggaaagagaaagggaggagatagagtgcattgaagtcagggagaatcctgat
catgtgacaaacgtctga
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