Hippoglossus hippoglossus (Atlantic halibut): 117758719
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Entry
117758719 CDS
T07778
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhip03021
]
117758719 (taf1b)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
117758719 (taf1b)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
117758719
NCBI-ProteinID:
XP_034436534
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All DBs
Position
24:368664..378155
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AA seq
571 aa
AA seq
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MDEELTAGFTELCAQCSAVDWGISDEGRFYCRSCHNVIERTKEVVDTTFTPGSTRISTIG
RGTRRRKADRGRQWMICEGFQFILRNQADALLRLGVSAHFKDQVLCQLWRLYLQKSRQAF
TNTPVRSSRFKLQRPGSDSDSVAESSAASASETDGETNLSSTAASNAESCTDWPQRWGSS
DVVTYLTARQRRSRGLMNMPKTLALIHLALLWSREPLTLSDLLRLVNGGHVPYVNAFEEL
PEEMKLDGKDALIFRVESVPSHRLVQRQAQTLLLFLQLPTFPPISRQSLLHPALLSLRYL
ADANLPDDLHPWVCRLMDDAGLGDFTLDPTSCPVLPQYDIQTAAVIVVTMKLIFGLDDHT
EWDLSDESGVQDDSENLFNLRRWFRLTQAALIAAQQKRHHDVARKQWKAKKPLYPSRDLK
AVVMKRKRTAEQVQMCFEKLSSRPVGVQRCGLSSFIFCWGDEDGADGPSLHHQKLDRVLT
LKHNVQTLSNTAYWHTALRVCDPKKCRSHYLEVEATLPRSFVWLLQLFSFLLNVKPANLY
EEVLKVERRVLDRRHLRRKGRTTRSEDMIVS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacttacggccggcttcacggagctgtgtgcgcagtgctccgcggtggac
tgggggatttcagacgagggtcggttctactgcagatcctgccacaacgtcatcgagaga
accaaagaggtggtggacacgaccttcacccccggctccaccagaatctccactatcggc
agagggacgagacgcaggaaagcagatcgtggtcgtcagtggatgatctgtgaaggtttt
cagttcatcctgaggaaccaggccgacgctctgctccgactcggagtctctgctcacttc
aaggaccaggtgttgtgtcagctgtggagactttacctgcagaagagtcgacaagcgttc
accaacaccccagtgaggagctctcggtttaaactgcaacgtccaggatccgactccgac
agtgtagctgagtcgtctgctgcttcggccagtgagacggacggagagaccaacctgtcc
agcaccgccgcctctaacgcagagagctgcactgattggccgcagcgctggggctcctca
gacgtcgtcacctacctgacggctcgtcagaggcggagtcgaggtctgatgaacatgccc
aagacgttggctctgatccacctcgctctgctctggagccgcgagcctctgacgctcagc
gacctgctcaggttggtgaacggaggtcacgtcccgtacgtaaacgccttcgaggaactt
ccagaggagatgaagctggacggtaaagacgctctcatcttcagagtcgagagcgtcccg
tcccaccggctcgtccagcgccaggctcagactctgcttctgttcctgcagcttccaacc
tttcctccaatcagccgacagagtctgctgcacccagcgctgctcagcctgcgctacctg
gcagacgccaacctgcccgacgatctccacccgtgggtctgcaggctgatggacgacgcc
ggtttgggtgatttcacgttggaccccacgtcttgtcccgtcctgccacagtacgacatc
cagaccgccgccgtcatcgtcgtcaccatgaagctcatcttcggcctggacgaccacaca
gagtgggatttatctgacgaatccggtgtccaggacgactcagaaaacctgtttaacctg
aggaggtggttcagattgacgcaggctgctctgatcgcagctcagcagaagagacaccac
gacgtcgccaggaaacagtggaaggccaagaaacctctttacccgagcagagacttaaaa
gctgttgtgatgaaaaggaaacggacagcagagcaggttcagatgtgttttgaaaagctg
tcttctcgtcccgtgggcgtccagcgctgcggtctgtccagcttcatattctgttggggg
gacgaggacggagcagacggtcccagtctgcaccaccagaagctggaccgagtcttgacc
ctgaaacacaacgtccagactctgtctaacacagcatactggcacacggcgctccgagtc
tgcgaccccaagaagtgcaggagtcattacttggaggtggaggcgacgctgcctcggtcg
ttcgtgtggctgctgcagctcttctccttcctgctgaacgtgaagccggccaacctgtac
gaggaggtgctgaaggtggagagacgagtcctcgaccgcagacacctgaggaggaagggg
aggaccaccaggtccgaggacatgatcgtcagctga
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