Hippoglossus hippoglossus (Atlantic halibut): 117759135
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Entry
117759135 CDS
T07778
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117759135 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117759135 (nudt21)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
117759135 (nudt21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
117759135
NCBI-ProteinID:
XP_034436962
LinkDB
All DBs
Position
3:15253204..15256452
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AA seq
259 aa
AA seq
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MSVVPPSRSAAGWPRGGAVQFGNKYISGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEV
EGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNCGQQGGTEPTALQTD
IHPADISEHNTGDLFKLSN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtgcctcccagtcgctcggccgccggatggccgcgcggtggtgccgttcag
ttcgggaacaagtacatcagcgggcccgcgaaaccgctcaccctggagaggaccatcaac
ctatatcctctcaccaactacacattcggcaccaaggagcctctgtatgagaaggacagt
tcggtggcagcccggttccagaggatgcgggaggagtttgataaaatgggaatgcgaagg
acagtcgagggtgtcctcattgtccatgaacacagactgcctcacgtgttgcttctacag
ctgggcaccaccttctttaaactgcctggtggagaactgagtcctggagaagatgaggtg
gagggtctgaagcgcctgatgactgagatcctcgggcgacaggatggggtgaagcaggac
tgggtgattgacgactgtatcggaaactggtggcgccccaactttgagcctccacagtac
ccctacattccagctcacatcaccaaacccaaggagcataagaaactgttcctggtccag
ctgcaggaaaaagcgctgtttgctgtccccaaaaactataaactggtggcagcaccattg
tttgaactgtatgacaatgctcctggatatggaccaatcatttccagtctaccacagcta
ctgagcaggttcaactgtgggcagcagggtggcacggagcctacagctctacagactgat
atccatcctgctgatatttctgagcacaacactggagacctttttaaattgagtaactaa
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