Hippoglossus hippoglossus (Atlantic halibut): 117759153
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Entry
117759153 CDS
T07778
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5
KO
K16505
cadherin-related family member 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117759153 (cdhr5a)
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Cadherin related
117759153 (cdhr5a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
HCV_NS4a
Motif
Other DBs
NCBI-GeneID:
117759153
NCBI-ProteinID:
XP_034436991
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Position
3:complement(409674..418726)
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AA seq
700 aa
AA seq
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MDLQLRNRPVDLLLRFTVLVLFSTLCAAQRLCTVPPGPVTVSENLTADVQVVQILSGADV
TLTLTVNPEDLFYLKGNVLMVKKGLDYESLSSTTLVVWVQCSGAGSTSVNESVDVLVENV
NDNPPNFAQNHFVIEVNELTAINSSVAVIEASDVDSEPLFYRLESATDKYFRLENINSPK
ILVKSLLDHDVVQKISLVLHVQDTFNGSASNKPFFTSVATVTVHVKDVDNRPPWFQPCLR
TNLGIAKLCVSSGYRGKVNLTEKEEGPLVLEPGPVFARDGDKNRSEQISYRILRGNEGNI
FQIDEDTGNITMTKAADIVGPITLTVLASQVTNRDQFAVTQVTMEVMKRSRNPPRFERER
YEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFAAGLNPDVKYEVQYSSYVNVTSDGFM
ILKRVVKTESFALQLRAVDSTTGEFGTAAVSVQVIPAVAIPSPSNIGYRPGDMALLGLVM
AALLVLCLIVIGFLISRLWKGNGSVDKLCECLGPCLKSDQPRAGHRDSLQYTNDGFQNEA
DQSRGGARRWNNILPRRSTFPQAQGRRSHHCSSCGVYTNHVPKGSPSVRPGRRGRGDGDE
YGKRSLLNKQRRKEGQKTVWFKEIEDSSDIEVEIIPDTVGRVEEETEEELEGEVEMEGVV
RDPAAPLRGSDDGQENQNTRPSEEQDCGVTNSEKEKEQEG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcagctgaggaaccgacctgtggaccttctcctcagattcactgtgctcgtc
ctcttttctacactttgtgcggctcaaagactgtgcacggttcctcccggtccggtgacc
gtgtcagagaacctcacggctgacgtccaggtggtccagatcctctctggtgctgacgtg
accctgacgctcacagtgaaccctgaagatctgttctacctgaagggaaacgtcctgatg
gtgaagaaaggactcgactacgagtcattgtccagtacaactctggtggtgtgggttcag
tgcagcggagctggatccacgtctgtgaatgagtctgttgacgttctggtagaaaatgtg
aacgacaatcctccgaactttgcacaaaaccacttcgtaatagaagtgaatgagctcaca
gccattaactccagcgtggctgtgatcgaagcttcggacgtggactcggagccgttgttc
tatcgtttagaatctgcaacagacaaatatttccgtctggaaaacatcaactctccaaag
atccttgtgaaaagtctcctggaccacgacgtcgtacaaaagatctctctggttttacac
gtccaggacacgttcaacggctcggcctccaacaaacccttcttcacgtccgtggccacc
gtcacggttcacgtgaaggacgttgacaaccggcctccgtggtttcagccgtgtctcagg
acaaacttaggaatcgccaaactgtgcgtgagcagcggctacagaggaaaagtcaacctg
acggagaaagaggaggggccgttggtgctggagccggggccggtgttcgccagggacgga
gacaagaaccggagcgagcagatcagctacaggatcctgagaggaaatgaaggaaacatt
ttccagatcgatgaagacacaggaaacatcaccatgaccaaagctgctgatatcgtcgga
ccaataactctcacagttctggcgtctcaggtgaccaacagggaccagtttgctgtgact
caggtgaccatggaggtgatgaagaggagcaggaaccctcctcgctttgagagggagcga
tacgaaggattcatctacagtaactccgtccctgagagcatgatcctccgggaccggagc
accaaccggcccttcagggtccgagcccgggacgaggacttcgccgccggtttgaatcca
gatgtgaaatacgaggttcagtacagcagctacgtcaacgtgacgtcggacggcttcatg
atcctgaagagagtcgtgaagacagaatctttcgcacttcagctccgagcagtggattcg
acgacaggagagtttggcaccgcagccgtttccgttcaggtgattccagccgtggcgatc
ccgtctccctccaacatcggctaccggccgggggacatggcgctgctgggtctggtgatg
gcggctctgctggtcctctgcctcatcgtgattggcttcttgatctcccgcttgtggaag
ggaaacggcagcgtggacaagttgtgtgagtgccttggcccctgtctgaagtcggaccag
cctcgggccggacaccgggactccctgcagtacaccaacgacggcttccagaacgaggcc
gaccagagccgtgggggcgccaggcgctggaacaacatcctccccagacggagcaccttc
ccccaggcgcaggggagacggagccaccactgctcctcctgcggcgtctacaccaaccac
gtccccaaggggagcccctcggtgagaccgggccggaggggccgaggagacggggacgag
tacggcaagaggtcgctcctgaacaagcagaggaggaaggagggccagaagacggtgtgg
ttcaaagagatcgaggactcgtcggacatcgaggtggagatcatcccggacaccgtgggc
cgggtggaggaggagaccgaggaggagctggagggggaggtggagatggagggggtggtc
agagacccggccgccccactgagaggctctgatgacgggcaggagaaccagaacacacga
cccagtgaggagcaggactgtggagttaccaactcagagaaagagaaggagcaggagggc
tga
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