Hippoglossus hippoglossus (Atlantic halibut): 117759183
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Entry
117759183 CDS
T07778
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117759183
04812 Cytoskeleton proteins [BR:
hhip04812
]
117759183
Cilium and associated proteins [BR:
hhip03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
117759183
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
117759183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
117759183
NCBI-ProteinID:
XP_034437031
LinkDB
All DBs
Position
3:complement(24258055..24298807)
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AA seq
813 aa
AA seq
DB search
MELNGKTMRSHKRNTCVSDRGMLPTPMVNSCKLHLTTDRSLVLDRAPAMSDSQDAGKDRD
MNSNPTMDRSNQGTRLLACSQRIFVKTTPPVPSFASDSTDIAHHDVPPAAAALSGSAALS
PAAQEASDKSKRPTNSTQAAYYHDVLNLPKPAGGSGGYNSAAPGVPFTQLPWDSFESGFQ
RIDLDRHCLEKCPQLGIMEKLQLLNLQHNLITRIQHLSHLQQLVFLNLYDNHISEMTGIE
ALSSLRILMLGKNRIQKIRCLGSLSKLNILDLHENQIYRIENISHLSELQVLNLAGNNIS
RVENLQKLDCLTELNLRHNCISFVTEVDRLPCLQRLFLSCNNITSFDQLACVGELRSLSE
LTLDGNPVALKTWYKQAVLRCVLHLRQLDMKRITDEDRRMASVHARKEEEKKRENHKQTI
HKEKRRLAIRNAAQQWEGVRACLELPPAQGAKEEVSPENSPAHSPAQTNGLAQEPSPDEP
RRVSPGSGSERPLGGTESRLRTNSRPNSPRDPKLVESGSSSSVQSLSLSDCHLVELDGDT
LRLFGLGALEALERGWGVQTAGAVTVITFRYISFDAIVPTLPRIRVKFPNLSHLIFLETN
ISRLAQLAALAQVRRLDQLTIHPEGNPMVALSLWRSFVIYRLHHLNLLKINGQEVTMNDV
IAAERVFGTLGHIAATETPRYRLLLLLEESRKRQLQFLLEGRGRRPGLSPEDLRDNGKLL
GEGLSRALFNYPSRDCSAESPEESTADSSERSTMIETYLQELVQRSSDTNLKGEALHKLW
PSMFAEMVRDSVLEMRDQAAFRQASLAKLSDTK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaatggcaaaacgatgcgctctcacaaacgcaacacgtgtgtgagtgacaga
gggatgcttcccacccccatggtcaacagctgcaagttgcacctcacaactgacaggtca
ctggttctggacagggccccggcaatgtccgactctcaagatgctgggaaagacagagac
atgaattcgaacccaacaatggatcgctccaaccaaggaaccaggttgcttgcgtgcagc
cagaggatatttgtgaagacaacaccacccgtgccatcatttgccagtgactctacagat
attgcacatcatgatgtaccaccagcagctgccgctctgagtggctcggctgcactttca
cctgctgcacaagaagcaagcgacaaatctaagagaccaaccaacagcactcaagctgca
tactaccacgatgtcttaaaccttcccaagccagctggtggttctggaggatacaacagt
gccgcccccggtgtccccttcacccagttgccctgggacagttttgagtctggttttcaa
cgcattgacttggacaggcactgtctcgagaaatgtcctcagctgggcatcatggagaaa
ctgcagcttctcaacctccagcacaacctgatcacaagaatccagcatttgtcccatctg
cagcagcttgttttcctgaacttgtacgacaatcacatctctgaaatgactggcattgaa
gctctaagttctctcaggatcctaatgctcgggaagaacagaatccagaagatccgctgc
ctgggaagcctgtccaaactgaatatcctcgatttgcatgagaatcagatctacaggatc
gagaacatttctcacctgagtgagctgcaggtgttgaacctggcaggaaacaacatctcc
agagtggaaaatctgcagaagctcgactgtttgactgaactcaacctgaggcacaactgc
atctcttttgtgactgaggtggaccgcctgccctgcttgcagcgcctctttctcagctgc
aacaacatcaccagttttgatcagctagcctgcgtcggagagttgcgctccctttctgag
ctcaccctggatgggaatcctgtagccctgaagacatggtacaagcaggccgtcctgcgc
tgtgtgcttcatctgagacagctggacatgaagcgcatcacagacgaggatcggcgaatg
gctagtgtgcatgctcggaaagaggaggagaagaagagggagaatcacaagcagaccatt
cataaggagaagcggcgtctggcgatccgtaatgcagcgcagcagtgggagggtgtcagg
gcctgcctggagctgccaccagcacaaggtgcaaaagaagaagtgagtccagagaacagc
cccgcccacagccccgcccagacaaatgggctcgcacaggagccttctccagatgagcca
agacgagtaagtccagggtcaggatcagagcgaccattagggggaacggagagcagactg
cgcaccaacagccgtccaaacagcccgcgagatcccaagcttgtggagtcagggagcagc
agcagcgttcagagcttgtccctatctgactgtcacctagtggagctggatggagacacc
ctgcgtttgtttggacttggagccctggaggccctggagaggggatggggagttcagacc
gccggtgctgtcaccgtaataaccttccgctacatcagctttgacgccatcgtaccgaca
ctgccgcgaataagggtcaagttccccaatctatcgcacctgatcttcctggaaaccaac
atcagccgtctggcgcagctggcagccctggctcaggtgaggcgtctggatcagctgacc
attcacccggagggaaaccccatggtcgctctgtctctgtggcgctccttcgtcatctac
cgcctccaccaccttaacctgctgaagatcaatggccaggaggtgaccatgaatgatgtg
atcgctgctgagcgtgtgtttggaacattgggtcatatagcagccacagaaactccacgt
tatcggctcctgctgctactcgaggagtccaggaagcgtcagctgcagttcctgttggag
gggcgagggcggcgcccggggctcagtccggaggatctgcgagacaacgggaagctcctg
ggagaaggcctgagcagagcgctgttcaactaccccagcagagactgcagtgcagagagc
cctgaggagagcacagcggactcgtcggagcgatccaccatgatagagacatacctccag
gagttggtccaaaggtcatcagacacaaacctgaagggcgaagctctccataagctctgg
ccctccatgtttgcagagatggtgagagactctgtgttggagatgagggaccaagcggcc
ttccgccaagccagccttgcaaaactctctgacaccaagtga
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