Hippoglossus hippoglossus (Atlantic halibut): 117759257
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Entry
117759257 CDS
T07778
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117759257 (lingo1b)
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117759257 (lingo1b)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
Ig_2
ig
LRR_9
LRR_Zer-1
LRR_RPS2
LRRNT
Ig_C17orf99
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
117759257
NCBI-ProteinID:
XP_034437202
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Position
3:complement(4784879..4806328)
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHSYLMACWQPILILMLGTVLSGSTTGCPSRCDCSGQERSVVCHR
RRLATLPEGIPTETKQLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLERLNIEGCNLASVPTDALSHLHNLLSLRLRYLNVTVIRDYSFKRLY
RLRELEVSHMPALDSMTPKCLFGLNLTSLSITNCNLTAIPYQAISHLRYLRFLNLSFNPI
QTVEGNQLLNLPKLQAFHLAGGRLTAIEPYSFRGLNHLRVLNVSSNSLCTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEVVQGKEFKDFPDILPSDYF
ICQKSKIMDYKVQESHVDEGTTVHFACQAEGDPVPVIMWLSPKKEYITTKTAGSRLSVSN
DGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRATVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDSTKSSIEVEYV
PRKEETEEASPTEEPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagtagtaggatggtgtccggggaggcgggagggcacagctacctg
atggcctgctggcagccaatcctgatcctgatgctgggcaccgtcctctctggctccacc
accggttgcccctcccgatgtgactgcagtggtcaggagcgttcggttgtgtgccatcga
cggagactggcaacgctacctgagggcatccccacggaaaccaagcagctagacctcagc
aagaaccgtctgaagactctggggccagaggagttcattaattaccctcagctggaagag
ctgcaacttaatgaaaatacaatctcctccattgagccgggggctttcagcaacctcatg
aaccttcgaactctaggtttgcgcaacaaccagctgaagctcattcagctgggcgtgttc
accggcctgaccaacctcacccagctggatattagtgagaacaaaattgtcattctgctc
gactatatgttccaggagctgtacaacctgagggctctggaagtcggtgacaatgaccta
gtattcatctcaccccgatcatttcatggcctcagcaaccttgaaaggctcaacattgag
ggatgcaacctggcctcagtgcccactgatgccctgagccatctgcataacctgttgtca
cttcgattgcgttatctgaacgtcactgtcataagggattactcctttaagaggctgtat
cggctcagggagctggaggtttcgcatatgcccgccctggattccatgaccccaaaatgc
ttgtttggactcaaccttacgtcactgtcaatcacaaactgcaatctgaccgccatcccc
taccaagccatcagtcacctgagatatcttcggtttctgaatttgtctttcaatcccatt
caaactgtggaaggcaaccaactgttaaatctaccgaagctgcaggcgtttcatttggct
ggtggaagattaactgccattgagccctattctttccgaggactcaaccacctccgtgtt
ctcaacgtatccagcaatagcttgtgcaccctggaggagtctgtctttcactcagtggga
aacctggagaccctggctttatacgacaacccactggcctgtgactgtcgcttgctctgg
gtcttccgccggaggtggaggctcaacttcaacagacagcagcccacgtgtgcttcaccc
gaggtggtgcaaggaaaagagttcaaggactttccagacatcctcccctctgactatttc
atctgccagaaatcgaagatcatggattataaagttcaagaaagccatgtggatgagggc
accacggttcatttcgcttgccaagctgagggtgacccggtccctgtgataatgtggctc
tcccctaagaaggaatacatcactaccaaaaccgcgggatcaagactttctgtgtctaac
gatggcacgttggaggtgcgttacgcccaaatccaggacaacggcacctacttgtgcatt
gcgagcaacgcagcgggcaacgacaccaaagctgctcacctttttgtgcatagctactcc
cccaactggccccaccagccaaacaagacatttgcctttatttccaaccagcccagcgac
gaaggtgctaatgtgacccgggccacggtcccctttccatttgatgtaaagacgctgatc
attgccaccaccatgggatttatctctttcctcggagtggtcctcttctgtcttgtaata
ctatttctctggagcagagggaaagacagcaccaagtcgagtatagaggtcgagtatgtg
ccgcgaaaagaggaaacggaggaggccagtccaactgaggagcccatacaattcaacatg
aaaatcatgtga
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