Hippoglossus hippoglossus (Atlantic halibut): 117759263
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Entry
117759263 CDS
T07778
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hhip00535
]
117759263
00536 Glycosaminoglycan binding proteins [BR:
hhip00536
]
117759263
04091 Lectins [BR:
hhip04091
]
117759263
Proteoglycans [BR:
hhip00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
117759263
Glycosaminoglycan binding proteins [BR:
hhip00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
117759263
Lectins [BR:
hhip04091
]
C-Type lectins
Lecticans
117759263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
I-set
ig
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
117759263
NCBI-ProteinID:
XP_034437209
LinkDB
All DBs
Position
3:356710..371693
Genome browser
AA seq
1507 aa
AA seq
DB search
MKLWPVLMCLCLRVVSGTFDHEYEEQGLMDPEDVLSVRVPLEGPQRPLLGGSLVLPCYFQ
DHTVPDPGAPTITPLSHRIKWSLVTKAKVTTILVALEGRVRITHSYLDRVHLLEYPKTPT
DASIQISELRSSDSGVYRCEVQHGIEDDHDIVHLQVQGIVFHYRGITGRYALTFDTATAA
CSQNSAVVASPEQLQAAFDGGFHQCDAGWLSDHTVRYPIHDPRVQCYGDKEELPGVRTYG
ARDLNETYDVYCFSEKMTGRVFHTAAAEKFSFSEAVAACSNQGAQLATTGQLYLAWQGGM
DVCNAGWLRDRSVRYPINIRRPQCGGGLLGVRTVYLHANQTGYPRPEARYDCFCYTESPE
DDGSGLIEEGSGVLSVTTVTQGPEVFFRRTTTESEALGELETQQPTAVDFTESPTELPLP
QPPNVTELITDLIESVTARPGVGREPSQGFVMPPTGVVFHYRSGSGRYRFTFVEAQLACR
SVGASMATAEQLQAAYEAGYHQCDAGWLLDQTVRYPIVFPREKCAGDLGDKPGVRSYGLR
PGDERYDVHCYVDGLKGEVFHVGSAEGFTFDEASSSCREQNAMLASPGELHAAWRMGLDK
CRAGWLVDLSVRYPINNPRAQCGAGESGVRTVYARPNQTHFPEHNARFDAYCFRADLLLI
ANETGLNITEIQEALLNLTSITELLRPAVPSIAHPIPVESSGSGSGSADFGSGSAVGSAS
GDQVTSGDLSGSGDFSGTGDISGSGDLSGSGDQVTSGDLSGSGDLSGSGDQVTSGDLSGS
GDFSGTGDISGSGDLSGSGDQLPQEISLVLETLSGSGDQVTSGDLSGSGDFSGDQVVSGD
LAGSGSAELPSGVSGLGSADASGSGLSGGESGIAVGSVSGGFQEAGEGSTGILMFPSSEV
GSGVLSGSGYLSGSGAGFGFSSGESEQFSGMPSGFITSQDFSGFSSFPSGVSSGSGHSGE
LSGSGDTHISLIDGELIDVSTPITHKEHELGGDLLVFSGSGDISGSGILSGDHSGSSSGS
DSGFFSGVTLVGSGFTELSVSSSGEQEASGSLLYSSGQGSGEHLSGFGSSSFISGFTSGM
PGSGMSGSGWSGSKSSTSGEGSVTFVSGDFLTEVSGDALSLELGQRSAVYSGEGSRSSSG
DDTSTVSSISSGVSSGLSSGLSSGDLPQALLPSTSGWGLTESTTGPEEAEVSQTHDEVHV
THGPALAPAGLAAPPTAETQGIVGKTATVEGDLNPCDPNPCGDAGCWVEGGAALCRTTPC
VADVCDSDPCANGATCVGGSDSYECLCLPSYGGKRCDIDEQQCEDGWTKFQGNCYLHLPD
RETWLDAEHRCRDLNAHLVSIITPEEQGFVNSNAQDYQWIGLNDKTVEKDFRWTDGSPLQ
FENWRPNQPDNYFHSGEDCVVMIWHESGQWNDVPCNYHLPFTCKKGPVSCGAPPEVDNAH
MFGNRKEEYPVNSIIRYQCDAGFTQRHPPVVHCKADGQWEEPQVECTDVKARRRTQRRSR
SPAAKLH
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtggccagttttaatgtgtttgtgtctgagagtcgtctcaggaacatttgac
cacgagtacgaggagcaaggcctcatggacccggaggacgttctcagtgtgcgtgtccct
ctggagggaccacagcgccctctactgggaggatcactggtgctaccgtgttactttcag
gaccacacagttccagacccaggagctcccaccatcacgccgctctcccaccgcatcaag
tggagcctggtcactaaagcaaaggtcacgaccatcctggtggcgttggagggacgggtg
cgtatcacacacagttacctggacagagttcatctgctggaatatcccaaaacaccaact
gacgccagcatccagatctctgagctgcggtccagtgactcaggagtgtatcgctgtgag
gttcagcacggcatcgaggacgaccacgacatcgtccacctgcaggttcaaggcatcgtg
ttccactaccgaggcatcacggggcgctacgctctgacgtttgacacagcgacggcggcg
tgctcacagaacagtgccgtggtggcttcacctgaacagctccaagctgcgttcgatggc
ggtttccaccagtgtgacgccggctggctctctgatcacacagtcaggtacccgatccac
gaccctcgtgtgcagtgctacggggacaaggaggagctgccgggggtccggacgtacgga
gcgagggacctgaacgagacctatgacgtgtactgtttctcagagaagatgacaggcaga
gttttccacacggccgcagcagagaagttcagcttctctgaggctgtggcggcctgctcc
aatcagggagctcagctggccaccacaggtcagctctacctggcctggcagggggggatg
gacgtgtgtaacgccggctggctgcgggaccggagcgttcgataccccatcaacatccgg
cggccgcagtgtggaggaggtctgctgggagtgagaactgtttacctgcacgctaaccag
acaggatacccacgtcctgaagctcgctacgactgcttctgctacaccgagtctcctgag
gacgacggctcaggcctcatagaggagggcagtggcgttctgagcgttaccacggtgacg
cagggccctgaggtgttcttcaggaggacgaccacggagagcgaagcactgggagagctg
gagactcagcaacccaccgctgtggatttcacagaaagtcccacagagctgccgctgcct
cagccgcccaacgtcaccgagctcatcactgacctgatagagtccgtcaccgcccggccc
ggcgtcggcagagagcccagccaaggctttgtgatgcctcctactggcgtggtcttccat
taccgctccggctccggtcgctatcggttcaccttcgttgaggctcagctggcctgtcgg
agcgtcggagcctccatggccacagcagagcagctgcaggcagcatatgaggccggatat
caccagtgtgatgcaggatggttactggaccagactgtaaggtatcccattgttttccct
cgagaaaagtgcgctggagatctgggggataaacccggagtgcggtcgtacggtctgagg
cctggagatgagagatatgatgttcactgctacgttgatgggctcaaaggtgaggtgttc
catgtgggatctgctgagggcttcaccttcgatgaggcttcttccagctgtcgagagcag
aacgccatgttggcctcccccggagagctccacgcagcctggagaatgggtttggacaag
tgccgtgctggctggctggtggatctgagcgtccgctatcccatcaacaaccctcgagcc
cagtgtggagcaggggaatctggagtgcgcaccgtgtacgctcgccccaaccagacacac
ttccctgaacacaacgccagatttgatgcatactgtttcagagctgatcttctactgatt
gcaaatgaaactggactgaacatcacagaaatccaggaggcgcttctgaacctgacgtcc
atcactgagttgttgaggcctgctgttccctctatcgctcatccaatccctgtggagtca
tcaggctctggttcgggttccgcagactttggttcagggtctgcagtcggtagtgcctct
ggggaccaggttacctctggagatctctctggttcaggagacttttctggtactggagac
atctctggttctggagacctctctggttctggagaccaggttacctcaggagatctctct
ggttctggagacctctctggttctggagaccaggttacctctggagatctctctggttca
ggagacttttctggtactggagacatctctggttctggagacctctctggttctggagac
cagttacctcaggagatctctctggttctggagaccctctctggttctggagaccaggtt
acctctggagatctctctggttcaggagacttttctggagaccaggttgtctctggagat
ctggctggtagcgggagtgcagagctgcccagtggagtgtctggtcttggtagtgcggat
gcttctggatcaggtcttagtggaggagaatctgggatcgctgtgggctcagtttcagga
ggattccaagaagctggagaggggagcacaggaattctgatgttcccttcatctgaagtg
ggctctggagtgctcagtggcagcgggtacctgtctggatctggtgctggattcgggttc
agctctggggaaagtgaacaattctctggcatgccatccggtttcatcaccagtcaggac
ttttctgggttcagcagtttcccatcaggagtttcctctggaagtggacactcaggagag
ctttcaggaagtggagacactcatatctcactgattgatggtgaattgattgatgtgtcc
actccgattactcacaaggagcatgaacttggtggggacctgctggtgttcagtggatct
ggagacatttcaggttctgggattctcagtggcgatcacagcggctcttcttcaggaagt
gactcagggttcttctcaggcgtgaccttggtggggtcagggttcactgagctttcagtg
tcatcctctggagagcaggaggcctctgggtctttactctacagctctggacagggaagt
ggtgaacacttgtctgggtttggtagctcaagtttcatctctgggttcacttcaggaatg
cctggatcaggaatgtctggatcaggatggtctggatcgaagtcctctaccagcggagaa
ggcagtgtcacatttgtgtctggagatttcctgacagaagtatctggagatgctctgtct
ctggagctgggacagaggtctgcagtgtacagtggagaaggaagcaggagcagcagcggc
gacgacacgtccacagtcagcagcatttcttcaggagtttcttctggactttcttctgga
ctttcctctggagatcttccacaggcgctgctgccctctacctcgggatgggggttaaca
gagagcacaacaggaccagaggaggctgaagtatcacagactcacgatgaagttcacgtg
acccatggtcctgcactcgcccccgcaggactggctgctcctcccaccgcagagacacaa
ggcattgtgggaaaaacagccacagtggaaggtgacttgaacccgtgtgatccgaacccc
tgtggtgacgctgggtgttgggtcgagggcggagctgctctctgccgcaccaccccctgt
gttgcagacgtgtgtgactccgacccttgtgccaacggagccacgtgtgtggggggttca
gactcgtacgaatgcttgtgcctcccgagctacggagggaaacgctgtgacatcgatgag
cagcagtgtgaagacgggtggactaagtttcaggggaactgttacctgcacctccctgac
agagagacgtggctggacgcagagcatcgctgccgggacctgaacgcccacctggtcagc
atcatcacgccagaggagcagggctttgtcaactcaaacgctcaggactatcagtggatc
ggcctgaatgacaagacggtggaaaaggacttccgctggacagacggttctccactgcaa
tttgagaactggaggccgaaccagccggataattacttccactccggagaagactgtgtg
gtgatgatctggcacgagagcggccagtggaacgacgtgccctgcaactaccacctgccg
ttcacctgcaagaagggtccagtgtcttgtggcgccccgccggaggtggacaacgcccac
atgtttggtaacaggaaggaggagtatcctgtcaactccatcatccggtatcaatgcgac
gcaggatttacacagcgccacccaccggtggtccactgtaaagcagacggacagtgggag
gagcctcaggtggaatgtactgacgtgaaagccagaagaagaacccagcggaggagcagg
agtccagcagccaaactccactga
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integrated database retrieval system
