Hippoglossus hippoglossus (Atlantic halibut): 117759498
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Entry
117759498 CDS
T07778
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117759498
03037 Cilium and associated proteins [BR:
hhip03037
]
117759498
Transporters [BR:
hhip02000
]
Other transporters
Pores ion channels [TC:
1
]
117759498
Cilium and associated proteins [BR:
hhip03037
]
Other cilia and associated proteins
Stereociliary proteins
117759498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
117759498
NCBI-ProteinID:
XP_034437540
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All DBs
Position
3:complement(30389591..30426659)
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AA seq
1175 aa
AA seq
DB search
MSTVSDSLVGSSRSLSAAKRHKSIRKNSRRIYSAYQDHQQGSSDDEDKEDERVDSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKL
SRVLYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRRMAKNSRLSLASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNIMSSAIQVSTGNWSDSSSFLATISQPEIDSLSTLVSEISLSEHRNSTIAT
IATVLEVTNSSRSVSGTVPNQTALFERNTRSQQDPCWETYVGQEMLKLSIIDMIFTVASI
LLIDFIRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPA
FNVMKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYR
PSQHCGPFSGQEKIYDIISETVASDFPLWFSNVMNYVTSPVVVLPALLLLFMLIYYLQAI
ARSLKFTNNQLRMQLQTERTDDKKKVFQMAAARLQAPEAAADQNLDQQESDITSQEASIH
TPSPRRNGSVTNFQSPVRRGNSIRTITQSASRADLSRGSGAGSGRSPTVTILPKHRLEHI
PNRPPPFLSGPSGSCRSKSYHHMAYNPPARYSDNIHSDPLYRKTVRSIHPVEASGFIAAQ
SYGGRRGHTRYVIVNEHEPRKKLLRSATRIPRHYLMEEPAEILELYPRNIKRYMPRTTHH
QLHPHRAHPSQQHLSEEEEEEEEGEGKSRRRMSQAHRPHSLSDLHQPAHFYVGDRVESHV
SMAKDSHAARGRYGAQEEDDEEDGGGEIAWRDIESHSRPQANVKGADHLLVRTRRHIHSP
GRHCPSPARTRLTESHMKPKTRPKLDTPVTESDSASLASSSDQQNSSTDQYIQVIHNKER
YLKSDARQGKLAKKKSKTSFDLNVTESNDLVCSNV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgtctgattctttagttggcagcagcaggtctctgtctgcagccaagaga
cacaagagtatcagaaagaactccaggaggatttattcagcgtaccaggaccaccagcag
ggctcctcagatgatgaagataaagaggatgagcgggtggacagcaatgacccagaggaa
atgttccagaacattcagtaccagaaggagatcatcgccaatatccggaccagaccctgg
ccaatgagacgcaagctcaaagttctaaagcaggccagagagattgttctgaagtatgag
ggccgactgaccagaaccagaggctaccagactgcaggagctgatctgctgaagaaactt
tcccgtgtactgtacaacattgtggttctgttcattccctgggaagtgaggatcaagaaa
attgaaagtcactttgggtcgggcgtggcttcctactttatcttcctgcgctggttgttt
gggatcaacatagtcctcaccatcatgactggagccttcattgttctaccagagctgctg
gctggagcaccatttggaaccacaaggagtaaaactatccccaaggagcatctggcctca
gcccaggacttggacaccatctggtctcttgggggctacctgcagtactctgtgttattc
tatggttactatggcagggtgagaaaaattggcagtgctgggtaccggttgcccctcgcc
tacttcctagttgggatggctgtctttgcctacagtttcatcattctgttaagaagaatg
gccaagaactctcgtctgagtttggccagtgcctctgatgagaacttcacgttttgctgg
agggttttctgtgcctgggattacttgataggaaacccagaagctgcagagagcaaggga
gccgccattgtcaacaacatcagggaggccattgtcgaggagcaagaaaagaagaaggac
acaagtttggcagttctgattagtctgcgcatcttagccaacatcctggtgctgctgtct
ctggctggcagcatctacatcatctactttgtggtggaccgttctcagaagctggagcag
gagaagccagagctgacgctgtgggagaagaatgaggtgagtgtggtcgtttctctcatc
accatgattgctccgtctgcctttgagctcgtggctcagctggagatgtaccacccacga
acctcgctgcgattccagctggccagagtgctggttttatacctgggcaatctctacagc
ctaattattgccctccttgataaagtcaacattatgagctctgctattcaagtgagcaca
ggtaactggtctgactccagttcgttcctggccaccatctctcagcccgagatagacagc
ctctctaccctggtgtctgagatctctttgtctgaacatcgcaacagcaccatagcgacc
atcgccacggtgctggaagtcaccaacagcagccggagcgtctctgggactgtccccaac
cagacagctctgtttgagaggaacacccgctcccagcaggacccatgctgggagacctac
gttggacaggagatgctgaagctgtccatcattgacatgatcttcactgtggccagtatt
ctgctcattgacttcatcagaggtttggtggtccgctacctgagtgactgctgctgctgg
gatttagagagcaagtttcctgaatatggagaattcaaaatagctgagaatgtcttgcat
ctgatttacaaccaaggaatgatctggatgggagcgtttttctctccctgtcttcctgcc
ttcaacgtgatgaagctgattggtctgatgtatctgaggagctgggccgtcctcacctgt
aatgttccacaccagcaggtgttccgagcctctagatcaaacaacttctacctggctatg
ctgcttttcatgctgtttctgtgcatgctgcccactatctttgccatagtcagatacaga
ccatcgcagcattgtggaccattcagtggtcaagagaagatttatgacatcatctctgag
acagtggccagtgactttcccctgtggttcagtaacgtgatgaattacgtcaccagccct
gttgtagtgctgccagcactgctgctgctgttcatgctgatatattatctccaagccata
gccagatccctcaaattcaccaacaaccagctgaggatgcagctccagactgagcgaact
gacgacaagaagaaagtctttcagatggctgcagcaagactgcaggctccagaggctgct
gccgaccaaaacctggaccagcaggagagtgacatcacgagccaagaggcctccatccac
acgccatccccccgaaggaatggcagtgtcacaaactttcagtcgcctgttcgtcgcgga
aacagcatccgcaccatcacccaatcggcatctcgggcggacctgagcagaggaagtggg
gctggatctggcagaagtccaacagtgaccatactgcccaaacacaggctggagcatatc
cctaacaggcccccaccatttcttagtggccctagtggatcctgtaggtctaagtcctac
catcacatggcgtacaatcccccagctcggtattctgacaacatccactctgaccccctg
tacaggaagaccgtacgctcaatacatcctgtcgaggcttctgggttcattgctgcacag
agttatggaggacgccgtggtcatactcgctacgtgattgtcaatgagcacgagcccagg
aagaagctgctgcgctcagccactcggatccctcgacattacctcatggaggagcctgca
gagatcctggaactgtacccacgcaacatcaaacgctacatgccccgcaccactcaccac
cagctacatcctcaccgggcccacccatcacagcagcatctgagtgaggaggaagaggag
gaggaggagggagaaggaaaaagcaggagaaggatgtcacaggctcatcggcctcattcc
ctctctgacctccaccagccagcgcacttctacgtcggtgaccgtgtggaaagccacgta
tccatggctaaagacagccacgcagctcgaggaagatatggagcacaagaagaggacgac
gaggaggatggcggaggagaaatagcctggagggatatagagtcacattcacggccccag
gccaatgtgaaaggagcggaccatcttcttgtgcgaaccaggcgtcacatccattcccca
ggaagacactgtccgtccccagccaggaccaggctcacagaatctcacatgaagcccaag
acgaggccgaagctggatacccctgtgacagagtcggactcagcctccctggcctccagc
agtgaccagcagaacagcagcactgaccaatacatacaagtcatccacaacaaggagcgc
tatctcaaatctgatgccaggcagggaaagctggccaaaaagaagtccaagaccagcttt
gatctaaatgtcactgagtcaaatgacctggtctgctccaatgtatga
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