Hippoglossus hippoglossus (Atlantic halibut): 117759676
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Entry
117759676 CDS
T07778
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117759676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117759676
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117759676
03012 Translation factors [BR:
hhip03012
]
117759676
04131 Membrane trafficking [BR:
hhip04131
]
117759676
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117759676
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117759676
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117759676
Translation factors [BR:
hhip03012
]
Eukaryotic type
Elongation factors
117759676
Membrane trafficking [BR:
hhip04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
117759676
Exosome [BR:
hhip04147
]
Exosomal proteins
Proteins found in most exosomes
117759676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
117759676
NCBI-ProteinID:
XP_034437817
LinkDB
All DBs
Position
1:complement(3852136..3859100)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKINRRDGNASGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKSGMVVTFAPVNVTTEVKSVEMHHEALT
EALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAASFTSQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVDKKAPTSGKVTKSAQKAQKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagctccacataaacattgtggtaataggacatgttgactccggcaag
tccaccaccaccggccacctcatctacaagtgtgggggcattgacaagagaaccatcgag
aagtttgagaaggaagctgctgagatgggaaagggttccttcaaatatgcctgggtcctg
gacaagctgaaggcagagcgtgagcgcggcatcaccattgatatctctctttggaagttt
gagaccagcaggtactacgtcaccatcatcgacgctccaggacacagggacttcatcaag
aacatgatcacagggacttctcaggccgactgcgctgtgctgattgtggctgcaggcgtg
ggcgagtttgaagctggcatctctaagaacgggcagactcgtgaacacgccctccttgcc
tacaccctgggagtgaagcagctcattgtgggcatcaataaaatggattccactgagccc
aactacagccagaagcgctacgaggagatcgtgaaggaagtcagcacttacatcaagaag
atcggctataaccctgacactgtggcctttgtgcccatctctggttggaatggagacaac
atgctggaacccagccctaatatgacctggttcaagggctggaagatcaaccgtagagac
ggtaatgcctcaggcaccacgctgctggaggctctggatgccatccagcctccctcgcgc
cccacagacaagcccctccgtctgcctctgcaggatgtctacaaaattggaggcattggt
actgtaccagtgggacgagtggagactggaatcctaaaatctggcatggtggtgaccttt
gctcctgtcaacgtgaccactgaggtcaagtctgtggagatgcaccacgaggccctgact
gaggcgctacctggcgacaatgtgggcttcaatgtcaagaacgtgtctgtgaaggatatt
cgccgtgggaatgtagctggagacagtcgaaacgacccaccacaggaggcggccagcttc
acctctcaggtgattatcctaaaccaccccggtcagatcagtgcgggctacgcccctgtg
ctggactgccacactgcacacatcgcatgcaagttcgctgagctcaaggaaaagattgac
cgtcgctcaggtaagaagctcgaggacaaccccaaggccctgaagtctggagatgctgcc
attgtggacatgatccccggcaagcccatgtgtgtggagagcttctccgagtacccacca
ctggggaggtttgccgtccgtgacatgcgtcagacggtggcggtgggagtgatcaagggc
gtggacaagaaagcccccaccagtggtaaggtcaccaagtcagcacagaaggcacagaag
gtcaaatga
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