Hippoglossus hippoglossus (Atlantic halibut): 117759717
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Entry
117759717 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
hhip04137
Mitophagy - animal
hhip04144
Endocytosis
hhip04340
Hedgehog signaling pathway
hhip04350
TGF-beta signaling pathway
hhip04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117759717
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117759717
04350 TGF-beta signaling pathway
117759717
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117759717
04137 Mitophagy - animal
117759717
09144 Cellular community - eukaryotes
04520 Adherens junction
117759717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117759717
04121 Ubiquitin system [BR:
hhip04121
]
117759717
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117759717
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117759717
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117759717
Autophagy
Mitophagy
Other mitophagy associated proteins
117759717
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
HECT type E3
117759717
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117759717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117759717
NCBI-ProteinID:
XP_034437894
LinkDB
All DBs
Position
1:12459910..12520232
Genome browser
AA seq
775 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASVPPGEPRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSSNGSRVAMESQNTNLS
HPPQLKEQGGPGAPQQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHC
RIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGERGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPV
SEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPEHLLKAFDEKELELIVCGLGKID
IADWKSNTRLKHCTAESNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIDANTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggggtgaggagaaacggcccagtgaagctgcggttgacagtcctgtgt
gcaaagaacctggcaaagaaagacttcttccggttgccagatccctttgccaaagtggtg
gtggacggttcaggacaatgtcactctacagatactgtgagaaatacgctggacccaaag
tggaatcaacattatgatctatacattggaaaggcagactccatcaccatcagtgtgtgg
aaccacaagaagatccacaaaaagcagggcgcaggtttcctgggctgtgtccgcctcctg
tccaatgccatcaacagattaaaagacactggctatcagagactggacctgaataagctt
ggccccaatgacaatgatactgtgagaggacagatagtagtaagtctccagtccagggat
cgcatcgggacaggagggccagtggtggactgcagtcgtctgttcgacaatgacttacct
gatgggtgggaggagaggaggacagcctctggaaggatacagtatctgaaccacatcaca
cgtaccacacaatgggagagacctaccaggccggcatcagagtactccagtccctcaggg
cgtccactgagctgcgtggtggacgagaacacaccagtgatgacacccgtcaatggggca
gaggccagtgtcccaccaggtgaaccgaggatccaggaaagacgggttcgatcacagcgg
catcgtaactacatgagtcggacacacctgcatacaccgccggacctccccgagggttac
gagcaaagaacaactcagcagggccaggtctacttcctccacacacagactggagtcagc
acttggcatgacccccgggtacccagggacttgagcaacgtgaactgtgaggagctcggc
ccactgcctccaggttgggagatcagaaacacagccaccggccgggtctactttgtcgac
cacaacaaccggacaacacagttcacagacccacgactgtctgctaacctgcacctagtt
ctcaacccaagttccaatggttcccgtgtggccatggagagccaaaacactaacctcagt
catccgcctcagttgaaggaacagggtggtcctggggccccccagcaagctctgtcgcca
gcgcagttgcccgaagaagcagagtgcctgacagtgcccaaatacaagagggacctggtg
cagaagctgaagatcctgcggcaggaactgtctcagcagcaaccccaggctggccactgt
cgcatcgaggtctgccgtgaggagatatttgaggagtcgtaccgacaggtgatgaaaatg
cgtccaaaggatctctggaaaagactgatgatcaagttcagaggagagagggggctggat
tacggtggagtagcaagggaatggttatacctgctatcccatgagatgctcaacccgtac
tacggcctgttccagtattccagagatgacatctacactctacagattaatccggactct
gccgtcaacccggagcacctgtcgtacttccactttgtgggtcgcatcatgggaatggcg
gtgttccacggccactacatcgacggaggcttcactctgccgttctacaaacagctgctg
ggaaaacccatcacgctggacgatatggagtctgtcgatcctgacctccacaacagcctc
gtctggatcctggacaatgacatcactggcgtcctggaccacactttctgtgtggagcac
aacgcctacggagaaatcatccaacatgaactgaaacctaacggcaagagtatccctgtg
tcagaggacaccaagaaggagtacgtcaggttgtacgtgaactggcgtttccttcatggc
atcgaggctcagtttctggcattgcagaaaggtttcaatgaggttatacctgaacacctt
ctcaaagcctttgacgagaaggaactggagctgatagtgtgcggcctgggaaagatcgac
atcgcagactggaagtccaacacccgtctgaagcactgcaccgccgagagcaacatcgtg
aagtggttctggaaagccgtggagtcgttcgatgaggagaggagggctcggctgctgcag
tttgtcactggctcgtccagagtcccgctgcaaggcttcaaggctttgcagggtgctgca
ggacccagactcttcaccattcatcagatcgatgccaacaccaacaatctgcccaaagct
catacctgcttcaaccggatcgacattccgccctacgagagctacgacaagctgtacgac
aagctgctaacggcaattgaggagacgtgcggcttcgcagtggaatga
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