Hippoglossus hippoglossus (Atlantic halibut): 117759791
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Entry
117759791 CDS
T07778
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04136
Autophagy - other
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117759791 (atg4c)
04136 Autophagy - other
117759791 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117759791 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117759791 (atg4c)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117759791 (atg4c)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117759791 (atg4c)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117759791 (atg4c)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117759791 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117759791
NCBI-ProteinID:
XP_034438088
LinkDB
All DBs
Position
4:complement(21952093..21960956)
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AA seq
480 aa
AA seq
DB search
MENKGSDEAEKLKTKFLSAWNNVKYSWALKSKTSFSRNSPVLLLGKCYHFKAEDDDSLTD
ACCEASNDDFVMGNAEAFRKDFASRVWLTYREEFPPLPSSALTSDCGWGCMLRAGQMMLA
QALILHFLGRDWTWSAALNLQPLDAETWTSTAAKRLVASLEASLQGSQGTSDPGLKHMPQ
ALGPAEEADAHLKEMYHRTLVSWFGDSPSAQLGLHRLVRSGLSMGKQAGDWYGPAVVAHI
LKKAVEEAMDPGLAGITAYVSQDCTVYSADVVDSHGAPAAGQPSAEPSDGPPPLQSDQPA
SASTPPDGRAVIILIPVRLGGEKTNPEYFDFAKSILSLEYCIGIIGGKPKQACYFVGFQD
DSLIYMDPHYCQSFVDVSTSDFPLQSYHCPSPKKMPFSKMDPSCTIGFYSRSVQDYERIS
QELSKVLQPSAKEKYPAFTFVQGHGRDYDLSAGLTPEKREWPFIRDPRRTVTTAGDFVLL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaagggagcgacgaggcggaaaaattgaagacaaagttcttgtcggcctgg
aacaatgtgaagtacagttgggctctgaaatcaaagacctcattcagtagaaattcccca
gtgctccttctgggaaaatgttaccatttcaaggctgaagatgacgacagtctcacagac
gcctgctgtgaagcctccaatgacgacttcgtcatggggaacgctgaagctttccggaag
gattttgcgtcgcgagtgtggctcacctacagggaggagttccctcccctgcccagctcc
gccctgacctccgactgtggctgggggtgcatgctgagggccgggcagatgatgctggct
caggcactgattctgcacttcttgggcagagactggacctggtcggcggcgctgaacctc
cagcccttagacgcagagacgtggacctccactgcagccaaacgtctggtggcctctttg
gaggcttctctgcaaggttcccaagggacctcggatccagggttgaaacacatgcctcag
gccctgggacctgcagaggaggcagatgcacatctgaaagagatgtatcaccgcacactg
gtgtcctggttcggggacagcccctcggctcagctgggcctccacaggctggtccgctca
ggcctgtcgatggggaaacaggcaggggactggtatgggcctgctgtggtggcccacata
ctcaagaaagctgtcgaggaggcgatggaccctggcttggcgggtataactgcctacgtc
tcccaggactgcacagtgtacagtgcggatgtggttgatagccacggggcaccagcagca
gggcagccctctgccgagccatcggacggccctcctccgctgcagagtgaccagccagcg
tctgcctccacgccgccagacggccgagcggtcatcatcctcatccctgtgaggctgggg
ggggagaagaccaaccccgagtattttgactttgcaaagagcatactgagcctggagtac
tgtataggcatcatcggagggaagcccaaacaggcctgctactttgtaggatttcaagat
gacagcttgatttacatggaccctcattactgtcagtcttttgtggatgtcagcaccagc
gatttccctctgcagtcgtatcactgcccctcgccaaagaagatgcctttcagcaagatg
gacccgagctgcaccataggtttctactcgagaagcgtccaggactatgagaggatcagc
caagagctgtctaaggtgctgcagccgtcagccaaggagaaatacccagcgttcactttc
gtgcaaggtcacggcagagattacgacctgtcggcgggcctgaccccggagaagagagag
tggcccttcatccgtgacccgaggaggacggtcaccaccgctggggactttgtgctgctc
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