Hippoglossus hippoglossus (Atlantic halibut): 117759871
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Entry
117759871 CDS
T07778
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117759871 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117759871 (hnrnpm)
Spliceosome [BR:
hhip03041
]
Common components
Common spliceosomal components
hnRNP proteins
117759871 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RBD_DEAH11
RRM_MARF1
Lipoprotein_18
DUF7552
Motif
Other DBs
NCBI-GeneID:
117759871
NCBI-ProteinID:
XP_034438233
LinkDB
All DBs
Position
4:complement(14836668..14844597)
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AA seq
714 aa
AA seq
DB search
MSNEQQAENTTEKAGPPQAPQQQQQQQQQGELNGKAKHEANASRKERPQKRGGGGRYEPY
GNVNKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEEL
MKKAVEKVNKHNFNGRPLKVKEDPDGVITQREMGKVQGGGPPGGHGGMGGMGGMGGMGGM
GGMDRMNMDRMGPGPNGGNVNIPPSLMNNPNIPNEVIHGLQAGKIGSTVFVANLDYKVGW
KKLKEVFNMAGMVVRADILEDKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRVMHVK
LDEKSLPKDFGPPERASSLPRGLSGIGLGLGPGGQPIDATQLNRGGGGGGGGGGGGGGGA
MGNMGPGGMDGMGFGNMGGRMGGGGGGGGGMENFGGMNNMDRFGSSGMGRMNEMDRGIGG
AFDREFGRNEMGMSRNNFGESFERGMGNSMGMDRMSSGMDRLGTSMERMAGMDRMGMERM
DRVTDLDRLGSGFDRMGSGMERLGPSMDRLAPGLDRMSSSMDRIGSAGFDRLGPSNMDRM
GSGLDFGSPMNMERMGNTGIDRMPTSFERMGSAGGIDRFSSGGLDRMSSGMDRMGSGGAG
GQFDRPADLDRGFGGNSFGGAGAGGPGTGGGNIRKGCQIFVRNLPFDFTWKMLKDTFNTC
GMVQYADIKMENGKSKGCGVVRFDNPETAERACRTMNGYRLNGREIDVRIDRNA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgagcaacaggccgaaaacacgaccgagaaagcgggtccgccgcaggcaccg
cagcagcagcagcagcagcagcagcagggagaattgaatgggaaagccaagcatgaggcc
aatgcaagcaggaaggagaggccccagaagagaggtggaggtgggcgctacgaaccctat
gggaacgtgaacaagagataccgggtctttgtcagcaacatcccatatgatgtcaaatgg
caagccctcaaagacctgatgaaagaaaaagtgggtgaggtaacgtacgtggaacactta
atggacgcagaaggcaaatcgaggggttgtgctgttgttgagtttaggactgaagagcta
atgaagaaagcggtggagaaagtaaacaagcacaactttaatggacgacccctaaaagtg
aaggaggaccccgatggtgtgattactcagagagaaatgggcaaggttcaaggtggagga
cctccaggaggccatggaggaatgggaggcatgggaggcatgggtggaatgggaggaatg
ggtggaatggaccgcatgaacatggatcgaatgggccctggaccaaatggtggtaatgtc
aacattcctcccagcctgatgaacaaccccaacatccccaatgaggtcattcatggtctc
caggctggcaagattggcagcactgtcttcgttgctaatcttgattacaaagtgggctgg
aagaagctgaaagaggtgttcaacatggccggcatggtggtgagggctgacattcttgag
gacaaggatgggaaaagcagaggcatgggcacagtaaccttcgagatgcccattgaagca
gtccaggctgtctctatgttcaatgggcagctgctgttcaacagggtcatgcatgtcaaa
ctggatgagaagtccctgcccaaagattttggaccacccgagagagcttcttctcttccc
cgtggtctcagtggtattggtttgggtctggggcctggtggccagcccattgatgctact
caactcaacagagggggaggaggtggtggcggcggtggtggtggcggaggaggaggagca
atgggcaacatgggccctggaggaatggacggaatgggctttggcaacatgggaggtcgt
atgggaggaggaggaggaggtggtggtggaatggaaaattttggaggaatgaacaacatg
gatcgttttggatcctcagggatgggccgaatgaacgagatggaccgtggaattggtggt
gcttttgacagggagtttgggcgaaatgaaatgggaatgtctcgcaataattttggagaa
tcctttgaaagaggaatgggaaactccatgggtatggaccgcatgagctctggaatggat
cggctgggaaccagcatggagcgtatggcagggatggaccgcatgggcatggaaaggatg
gaccgtgtgactgacctggacaggctgggttctgggtttgaccgaatgggctctgggatg
gaacggctggggcccagtatggacaggcttgcacctggccttgaccgtatgagctccagc
atggaccgcatcggctcagcagggtttgatcgcttgggcccgtctaatatggatcgcatg
ggttctggcctggactttggctctccaatgaatatggaacgcatgggcaacactggcatt
gacaggatgcccactagcttcgaacgcatgggctctgctggaggaatagaccgcttctcc
tcaggtggcctggaccgcatgagttctggcatggatcggatgggatccggaggtgctggt
ggccagtttgaccgtcctgctgacctggatcgtggatttggtggtaattcctttggagga
gctggagctggagggcctggaactggtggaggcaatatcaggaagggatgccaaatcttt
gtcagaaatctgccatttgacttcacctggaagatgctgaaagataccttcaatacatgt
ggcatggtccagtatgctgatatcaagatggagaatggcaagtccaagggctgtggtgtg
gtccgctttgacaaccccgaaactgctgagcgtgcttgccgaaccatgaatggctaccgg
ctgaacggaagggagatcgatgttaggattgataggaatgcataa
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