Hippoglossus hippoglossus (Atlantic halibut): 117759907
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Entry
117759907 CDS
T07778
Symbol
ftsj3
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117759907 (ftsj3)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117759907 (ftsj3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
117759907
NCBI-ProteinID:
XP_034438296
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Position
4:15391657..15401277
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AA seq
858 aa
AA seq
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MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQ
VASNFMPVSSLIIGVDLVPIKPIPNVVMLQEDITTEKCRQSIRKQLQTWKVDVVLNDGAP
NVGANWSHDAFTQAHLTLMALKLACDYLVKGGTFVTKVFRSKDYQPLLWIFQQFFKKVQA
TKPQASRNESAEIFVVCQGYLAPDKIDSKFFDPKYAFKEVEVLAKTVKDLMPVKKPKAEG
YTDGDLTLYHSFTVTSFLRAENPIDFLSKASEISFDNPDLESHSATSIEIKECCRDIKVL
GRKELRLLLSWRSKLRRFLSKRLKAAKEQDQELNLSSDEEKCKSDDEPEQKKEVEDDDEK
EEEELEKKLAELKAEEVSELRRKKKKLLKERRKVRERVELKMDLPGVSIADTDDTCLFSL
STIKKQKVLTDISKGDMQVADNLPDEDDDLYLSEDDEDSADQMSLASDLDDEDMEEVEQR
QKELEMKAPKKKKVQFAEEEEDEGKDSGLLVELEGKDEKKERETSLWFSKGIFSEIDLEG
DAKSELQHTELLQNKQTGKSQKRKAEEEEAEEEEEEEAAEEAVSAAAAAPAAPAAPQEEK
AGPSKEAAKESDSDDSSDDENEITRMKQAAGKSGEADDDLQVVPVESTSKKARILDAEGL
ALGCKIATSKKTARDLMDGSFHRFASSDEPWEVPEWFLDDERKHRKKPIPVTREMVEEFK
QKWKEIDARPIKRVAEAKARKKRRMLKKMEQAKKRAEAVVNTVDITEREKMAQLKSIYKK
AGIGKEKREVTYVVTKKGAGKKVSRPPGVKGVFKVVDGRMKKDLRGTKRKEQRDKGGKGK
GAKVKGRSPKGGRKKGAK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagctgaaagtcggaaagacgagaaaagataaattctaccacttggccaaa
gaaacaggttatcgctcgcgttcctccttcaaactcatccagctcaaccgtaagtttcag
tttctgcagaaagcccgagccctggtggacctgtgtgctgctccgggaggatggttgcag
gtagcatcaaactttatgcccgtgtcaagtctcattattggtgttgacctggtgcccatc
aagcccattcctaatgtggtgatgctgcaagaagacatcaccacagagaaatgcagacag
tctataagaaagcagctgcagacttggaaggtggatgtggtgttaaacgatggagccccg
aatgtgggagccaactggtcacatgacgccttcacacaagctcacctgaccctcatggct
ctgaaactggcttgtgactatctggtcaaaggtggcacttttgtcacaaaggtcttccgc
tccaaagattaccagccgctcctctggatcttccagcagttcttcaagaaggtgcaggcc
accaagccgcaggcatccaggaatgagtccgctgagatctttgtcgtctgtcagggttat
cttgccccggataaaatcgacagcaagttctttgaccccaaatatgcgtttaaggaggtg
gaggtgctggccaaaactgtgaaggacctgatgcctgtcaagaagccaaaggcggaggga
tacacagatggagatctgacgctttaccacagcttcacagtgacctcttttctcagagct
gagaaccctattgacttcctgagcaaagccagtgagatcagcttcgataacccagacctg
gagtctcactcagccaccagcattgagataaaggagtgttgtcgtgacatcaaagtcttg
ggccgtaaagagctccgcctgctgctgagctggaggtccaagctgcggagattcctgtcc
aagagactgaaggcggccaaagagcaggaccaggagctcaacttaagctctgatgaagaa
aagtgtaagtcagacgacgagcccgaacagaagaaagaggtggaggacgacgatgaaaag
gaggaggaggaattggagaagaaactggcagagctgaaagcggaggaagtgtctgagctc
agacggaagaagaagaagctgctgaaagagcggaggaaggtgagggagagagtggagctg
aagatggacctgccgggcgtctccatcgccgacaccgacgacacatgcctgttctctctc
agcaccatcaagaagcaaaaggtgctgactgatatatccaagggggacatgcaggtggca
gataatctaccagatgaagatgacgacctgtacctgtctgaggatgacgaagacagcgca
gatcaaatgtccctggcctctgatttagatgacgaggacatggaggaggtggagcagcga
cagaaagagctggagatgaaggcaccaaagaagaagaaagtacagtttgctgaggaagag
gaggatgaagggaaggacagtggtctgctagtggagctggagggaaaggatgagaagaaa
gagcgagagaccagcctgtggttcagcaagggcatcttctctgagattgacctggaagga
gacgcaaagagtgagctccaacacactgagctgctccagaacaaacagacaggaaaaagc
caaaagaggaaagctgaggaggaggaggcagaggaggaggaggaggaggaggcggcagag
gaggcggtgtcagctgctgctgctgctcctgctgctcctgctgctcctcaggaggaaaag
gcgggaccttcaaaggaagctgcgaaggagagcgactcagacgacagcagcgatgatgag
aatgagattaccaggatgaagcaggctgctgggaagtcaggagaggccgatgatgacctc
caggttgttcctgtagagagcaccagtaagaaagccaggatcctggatgctgaaggcctg
gccctcggctgtaagatcgctacgtcaaagaaaacagccagagacctgatggacggctcc
tttcataggtttgctagctctgacgagccatgggaagtacccgagtggtttctggacgat
gaacgtaaacaccggaagaagccaatacccgtcactagagagatggtggaggaattcaaa
cagaaatggaaggagatcgatgcccggcccatcaaacgagtggctgaagccaaggccagg
aagaagaggaggatgctgaaaaagatggagcaggcaaagaagagggcggaggcagttgtc
aacacagtggacatcactgagagggagaagatggctcagctaaagagtatctacaagaaa
gcaggcatcgggaaggaaaagagagaagtcacatacgtcgtgaccaaaaagggagccggc
aagaaggtgagccggccccccggcgtcaagggagtcttcaaagtagtagacggtcgaatg
aagaaagacctgcgggggacgaaaaggaaagagcaacgcgataaagggggcaaaggaaaa
ggggcaaaagtcaaaggaagatcgccaaaaggtggcagaaagaagggtgcaaaataa
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