Hippoglossus hippoglossus (Atlantic halibut): 117759932
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Entry
117759932 CDS
T07778
Symbol
atg4da
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04136
Autophagy - other
hhip04140
Autophagy - animal
hhip04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117759932 (atg4da)
04140 Autophagy - animal
117759932 (atg4da)
04136 Autophagy - other
117759932 (atg4da)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117759932 (atg4da)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117759932 (atg4da)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117759932 (atg4da)
Peptidases and inhibitors [BR:
hhip01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
117759932 (atg4da)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
117759932 (atg4da)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117759932 (atg4da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
117759932
NCBI-ProteinID:
XP_034438355
LinkDB
All DBs
Position
1:complement(14875125..14883621)
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AA seq
503 aa
AA seq
DB search
MNSVSPCTAQYIGGVMQDELVENRRQQQQQQPMERQGSFGLRPPQTPDPGREAVGEPDEM
DKLKAKLMSAWNNVKYGWTVKSKTSFNKMSPVSVLGHSYLLNSEDEVERFRLAFVSRIWL
TYRREFPPMEGSTWTTDCGWGCMLRSGQMLLAQGLLVHLMPRDWAWPDAQQLTDVDFEVF
RPNSPARAGGVPIPSFGSPRGSNTPVKSLPSDQVPKSSQKKRPECARDRQAEPVHHRVVT
WFGDQPLAPFGVHQLVEIGRSSGKKAGDWYGPSIVAHILRKAVAKTCVVQNLALYVAQDC
TVYKEDVARLCDPSLSQTPPDPSSETWKSVIILVPVRLGGEALNPSYIECVKNILKLECC
IGIIGGKPKHSLYFVGFQDEQLLYLDPHYCQPVVDVTQVNFSLESFHCSSPKKMPFTRMD
PSCTIGFYAKNKKDFESLCSAVNVALSSTKEKYPIFTFVEGQSQDYGLEGHSSNHSGPAA
LILPPGKLGRSNNRRNSDEFVFL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagtttccccctgcacagctcagtacataggtggagtgatgcaggatgagctg
gtggagaaccggaggcagcagcagcagcagcagccaatggagcgacagggcagctttggt
ctcaggccacctcagactccagatcccggcagagaggcggttggagagcccgatgaaatg
gacaaactaaaagccaaactgatgtcagcatggaacaacgtcaaatatggttggactgta
aagtctaaaacctccttcaacaagatgtcaccagtctctgtcctgggacactcctatctg
ctgaacagtgaggacgaggtggagcgctttcgtttggctttcgtgtccaggatctggctc
acgtacaggcgggagttccctccgatggagggttccacctggaccaccgactgtggctgg
ggctgcatgctgcgcagcggccagatgctgctggcacagggactcctggtccatttgatg
ccaagagattgggcttggccagatgctcagcagctgaccgacgtggactttgaggtgttc
agaccaaattccccagctcgggcaggtggggttccgatcccttcttttgggtccccacga
gggtctaacacccctgtgaagtccttgccaagcgaccaggtccctaaatccagccagaag
aagaggccagagtgtgcaagggacagacaagcagagcccgtccaccacagggtggtcacc
tggttcggagatcagccccttgcaccttttggagttcaccaactggtggaaattggtaga
agttcagggaagaaggctggtgactggtatggcccgtcgatcgtggcacacatactgcgg
aaagcagtagccaaaacctgtgttgtccaaaacctggctttatatgtggctcaggactgt
acagtgtacaaagaagacgtggctcgtctatgtgatccgtcactaagccagactcctcct
gatccatccagtgaaacctggaagtctgtcatcatcctggtgcctgttcggctggggggg
gaggccctcaacccgtcttacatagaatgtgtcaagaacattctaaagttggagtgttgt
attggaatcatcggaggaaaaccgaagcattcactctacttcgttggcttccaagatgag
cagctgctgtatctggaccctcactactgccaacctgtggtggatgtaacacaagtcaac
ttctcactggagtccttccactgcagttctcctaagaagatgcccttcacccgcatggat
cccagctgcaccatcggcttttacgccaagaacaagaaggactttgagtctctgtgttct
gctgttaatgtagccctgtcgtcaaccaaggagaagtaccccatctttaccttcgtagag
ggccagagtcaggactacggacttgagggtcacagcagcaatcacagcggacctgcagcc
ctcatcctgcccccgggcaaactgggccggagtaacaacagaagaaacagtgacgagttt
gtcttcctctaa
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