Hippoglossus hippoglossus (Atlantic halibut): 117759934
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Entry
117759934 CDS
T07778
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117759934 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117759934 (rexo1)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
Pre-60S particles
RNases
117759934 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
ChaC
Motif
Other DBs
NCBI-GeneID:
117759934
NCBI-ProteinID:
XP_034438356
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All DBs
Position
4:complement(20467926..20479198)
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AA seq
1266 aa
AA seq
DB search
MLRSTGFFRGIDCPFYAESGDAGGGRNGCNRAYCHFRHSQQRRPSYGAPPADVKKHREPL
SAQKEQGYDPFNPEVVRPQEQQNGKPAESGDFSGALEQVNRAIEEARSEVEWEKRKLSRI
GDEPYNPSGSTSLSSSRATKSKAAASHMAYDPGSYQITSVGYNPSPSCSKYTLDSDNQGS
NSNSMEYVPTLKKPPTRTKTYKLPSPPSSPKYSISAVASKCKYTLDNSKPSTDMEYDPLS
NYTAGIAAKSKRAEAARAVKTHGSKTHKLPVRDLSDEEYVVAVKKTQQPSVDMSKYTFSD
SEEESSGTEYRPTSLRNLQQRKGHTGTAGVAFAKEKKERTESVINALTQRNKEDSAQDSD
VQVDIKRKGNPEKNKLVSRISHEKSGKSEKIHKFEKEAKKTLSSKSGSSSRNDKGSIKHS
NQESAKKENKSLGKKDDSKNTITDKTSDKIQREGRDKKRIDGKIKAVEKVKTDSSKRHID
TENDSRERKKPKTLDKEKEHSRNKDRQHKNGKLDTSKREKDVKKMNKSSSQGGSSSSSHS
RGSSASSNKTKQNVSSSNGKRPENKRKSLSHADLFGDESPEEADPMEVDDDDDDDDDDGE
EVLVRKSADALKRACLNKRKVSELTPSSSDDEGGVEGGSADRDEVDHLEIDISGFQDDFD
LDSDPMEECLRIFNESKDVKKEDKGRQTKQPSRDSEEEKGPETTLIPGQKKRVSHCSAKS
ESTKVRPYKRASAQEVCYQRMQLAQHQAAQLSASVKAAAQSSSSSFPGERKRIAHRPSPQ
ISSSKTSSADAKPAVSRVLSPNQTHQTVKAQTTAGILSKTMSTVTGKRMAHTPTMKSSSM
KRPIIPTDFGAKVPTNVRQRYLNIFIDECVKFCPSEDAAFQMGLDEEKLVYERSSSKNIY
LNVAVNTLKKLRSKCSSRPSPVTKDPGVFANRKAQSHEEVLGGRLAATTSFTVNRMGKQQ
EEKLTGLTLYRKLKTYMMTEEQLQEHGYPRFNPEAPGKAFVYNVPEKKAITDPLNKICCR
CGAEYRINVNGNCVRKEECSFHWGRLRRHKGSGGWETNYNCCAGAVGAPGCQVCKQHVQD
GRKESLDGYMSTFSKSLPPDGNGGVFALDCEMCYTKQGLELTRVTVIDSEMKVIYDTFVK
PITKVVDYNTRFSGVTQEDLESATITLRDVQAVLLSMFSAESILIGHSLESDLFALKLIH
SSVVDTAIVFPHRLGLPYKRALRNLMAEHLKRIIQDNVEGHDSSEDASACLELMIWRIKE
DAKVKR
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgttacgctccaccggcttcttccgagggatcgactgcccgttttacgccgagtccggc
gacgctggcggcggcaggaatgggtgtaacagagcctactgtcacttcaggcacagccag
cagcggcggccgtcctacggagctccgccggcggatgtgaagaagcacagggagccgctc
tccgcccagaaagagcaaggttatgatcccttcaacccagaagtggtgcggccccaggag
cagcagaatgggaagccggctgagtcgggggacttcagcggggccctggagcaggtcaac
agggccattgaggaggcccgcagtgaggtggagtgggagaagaggaagctctctcgaatt
ggggacgaaccatacaatcccagtgggagtaccagtttgtcttcatctcgtgccacaaaa
agtaaagctgcagcttcacacatggcctacgatcctgggagctatcagatcacatcagtt
ggttataatccctcccccagctgcagcaagtacaccttggattccgacaaccaggggagc
aacagtaactctatggaatatgttcctacgttgaaaaagcctccaactcggacaaaaacg
tacaaactcccctctcccccttccagcccaaagtattcaatcagcgcagtcgcctcaaag
tgtaaatacactctggacaattcaaaaccttctacagacatggagtatgacccactctcc
aactacacggcaggaatcgcagcaaagagcaagagggcagaggctgcccgggctgttaag
actcatgggagcaagacacacaagttacctgtgcgtgatttatcagatgaggagtacgtt
gtagctgtgaaaaaaacacagcagccgagtgtagacatgtccaaatacactttttctgac
tctgaggaggagagctctggaacggagtatcgacccacctctcttagaaatctccagcag
agaaaaggccacactggaacggctggtgtcgcttttgcgaaggagaaaaaagagagaact
gaaagtgtaataaatgcactgacacaaaggaataaagaggactcggcacaggactcggat
gtccaggtagacattaaacgaaagggcaatccagagaaaaataagctggttagtcgaatt
agtcatgagaaaagtggcaaatctgagaaaatccataaatttgaaaaagaggcaaagaaa
acgttaagtagtaaaagcggtagcagcagtcgcaacgacaaaggttcaataaaacactca
aaccaggagtctgcaaaaaaagagaacaagagtcttgggaagaaagatgatagtaaaaac
acgataacggataagaccagtgataaaattcagagggagggaagagacaaaaagagaatt
gatggtaaaatcaaggctgtggaaaaagttaaaacagactcaagcaaacgacacatagac
acagaaaatgattcgagggaaagaaagaaacccaaaacattagacaaggaaaaggaacac
agcaggaataaggaccggcaacataaaaatggtaaacttgacacgagtaaaagagaaaag
gatgtgaagaaaatgaacaaaagcagttctcagggtggcagcagcagcagcagtcacagt
agaggaagttctgcaagcagcaataagacgaagcaaaacgtcagctcatcaaatgggaaa
agacctgagaacaagcggaagagtctgagccacgcagatctgtttggagacgagagtcca
gaagaggctgatccgatggaggtggatgacgatgacgatgacgacgacgatgatggagag
gaagttttggtgagaaagtcagctgatgctttaaagagggcgtgtctaaacaagaggaaa
gtgtccgagctgactccgtcttcctctgacgatgagggtggcgtggagggaggcagcgca
gatagggacgaagtggatcatctcgaaatcgacatctccggtttccaggacgattttgac
cttgactcagatcccatggaggagtgtttgcggatcttcaacgaatccaaggatgtaaag
aaggaagacaagggcaggcaaaccaaacagccctctagggattcagaggaggagaaaggc
ccagagaccactctcatccccggtcaaaagaagagagtctcacattgttctgccaaaagt
gaatcaactaaggtacgaccgtacaagagagcctcggcccaggaggtctgctaccagcgt
atgcagctggcgcagcatcaagctgctcagctctctgcttcagtcaaagctgccgcacag
agctccagctccagcttccctggagagaggaagaggatagcacaccgtcccagcccacag
atatcatcctccaaaacaagttctgcagatgctaaaccagctgtcagtcgagtgttatcc
cccaaccagacgcatcagactgtcaaggctcaaaccacagccggtattttgtccaagact
atgtccactgtgacggggaagaggatggcgcacactcccaccatgaagagttcttcgatg
aagcggcccatcatccccactgactttggggccaaagttcctaccaacgtccgccagcgc
tacctcaacattttcatagatgaatgtgtcaaattctgcccatcagaggacgctgccttc
cagatgggcctcgacgaagagaagctggtgtatgagcgcagtagcagtaagaacatctat
ctcaatgtagctgtcaacaccttgaagaagcttcgcagcaagtgcagctcccgtccatca
cctgtcaccaaggacccgggggtgttcgctaacaggaaggcccagtcccatgaggaagtt
ctcgggggtcggttggctgctacaaccagcttcactgtcaacaggatgggtaaacagcag
gaggagaaactcacaggactcactctgtacaggaaactgaagacgtacatgatgacagag
gagcagctgcaggagcacggctacccaagatttaacccagaggctccgggcaaggccttc
gtatacaacgtcccagagaaaaaggccatcacagatcccttgaacaagatatgctgtcga
tgtggagcagagtataggatcaatgtcaatggcaactgtgtacggaaagaggaatgcagt
tttcactggggacgtctacggagacacaaaggctctggaggctgggagaccaactacaac
tgctgtgctggtgcggtgggcgctccaggttgccaagtgtgcaagcaacatgttcaggac
gggcggaaagagtcgttagacggctacatgtcaacgttcagtaaatctctaccaccagat
ggcaacggaggggtgtttgctttggactgtgagatgtgctacacaaaacaaggcctggaa
ctgacgagggtgacggtcattgactctgagatgaaagttatctacgacaccttcgtcaaa
cctataaccaaagtggtggattacaacacacgattttccggggtgacgcaggaggacttg
gagagcgccaccatcaccctgagagatgttcaggccgtgctgctcagcatgttcagcgct
gaatccattctcatcggacacagtctggagagcgacctcttcgctctgaagctaatccac
agttcagtcgtagacacagccatcgtgttccctcaccgcctcggcttaccctacaaacgt
gccttgagaaacctgatggctgaacacctcaaacgcatcatccaggacaacgtggagggc
cacgactcgagcgaagatgcgtccgcctgcctggagctgatgatctggaggatcaaggag
gatgcaaaggtcaaaagatga
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