Hippoglossus hippoglossus (Atlantic halibut): 117760074
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Entry
117760074 CDS
T07778
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117760074 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117760074 (rubcn)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Other autophagy associated proteins
Others
117760074 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
Motif
Other DBs
NCBI-GeneID:
117760074
NCBI-ProteinID:
XP_034438701
LinkDB
All DBs
Position
4:17022602..17043662
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AA seq
973 aa
AA seq
DB search
MEIAAEEEAEERRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLQKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYVSPHLASHVEQFSKLEPVLSSGMQSTGESFKAERWLLHS
LQVHMLSAQLRPLLRHLGHARKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKGPQCLGLLKSQSLCVLPGAGGAWRNRDAVPRGETLNRRLTTSNCSLREAVFTSH
KSGPSTGVRSQNSNSTNTTSPAGIVGPPWVCVSRPGESERGITSPPGSVSVPCITLKEST
TPTHPQPEAGDSGDGDYDDGPEYLAIGNLGQRSRRDSQSSTHSSEQGVTPGHSMERRSQA
PPPPRRSSFSEVQRGSGRGSRGHTRSFSDTGINQKLRNGGAPRKITIIIEDPVEESPVDE
CCLKDYSPFSPQCSDSSDPSSLYMESYGSQYSSVPDGMFRKPSEGQSLISYLSEQDFGSC
ADLEKENAHFSISESLIAAIELMKCNLRRREEEGEEEGDSDCEIQQLKQKIRLRRQQIRH
SRLPPCTTSHPIIHSTDSGGSRRSSQDSYQGLSDSGSAEEVEECELRDGCEGQSLLAVSQ
NGLSLSLASLFSDADIKRSVSSRSFLSSESISPSFLQSNSAESVAMGLLRQFEGMQLPAA
SELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIH
PAPKKKIVVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPGRVLRK
WDFSKYYVSNFARDLLSKIAGDPLFNPNDINSGLYKKVKPLEAVRVLRVQLFHMKNLFKT
CRFAKGVLDHFDSLPGHLTEDLHLFSLNDLSAVRNGELAPRMKELIKLGTVHVDGCVLCQ
AKGFVCEFCGNDKDIIFPFQLNKCQRCEECHACYHRNCFRAGKECPRCLRLAERRERMAR
KNMEEQEDEGGGT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcggcggaggaagaggcggaggagcgcaggagggagcactggaagctgctg
tccagcctgaagaccacagtggagggtctcgtgtccactaacaaccccaatgtgtggtcc
cgctatggcggcctgcagcggctccagaaggacatgaacaacatcctcagtcacggcttg
aagaatgagcaggtttactacaagcagagagactactggccgtttgtgtggtgtgtccgc
tacgtcagccctcacctcgcctcacacgttgaacagttcagtaagctggagccggtgctg
agcagcgggatgcagagcactggtgaaagcttcaaggccgagcgctggctgcttcacagc
ttacaggttcacatgctgtcagctcagctccgacctctgctcaggcatctgggacatgca
cgtaaatactataatgatgacgcgtttctgctgagcgagcctcacgtgacagccatgttt
cagtgtctggaagctgtggaacagaacaatcccaaactgctggcccaagtagacacagtt
gggctgtcccctctgaagggcccacaatgtctgggtctgttgaagagccagagcctgtgt
gtgttgccaggggccggtggggcctggagaaaccgtgacgcagtgcctagaggagaaact
ctaaaccgcagacttaccacctccaactgctcgttgcgtgaagcagtcttcaccagccac
aaatctggaccctctacgggagtccggtcccaaaacagcaacagcacaaacactacctct
cctgccggcatcgtcggacctccctgggtgtgtgtgtccaggccaggggagagcgagcga
ggcataacatccccccccggctccgtctcggtcccttgtatcaccctaaaggagtccaca
acgcccacccatccccaacctgaagctggggactctggtgatggtgactatgacgacggg
ccagagtacctggctatcggtaacctggggcaacgcagtcgccgtgactcccaaagctcc
acccacagtagcgagcagggtgtgaccccggggcattccatggagcgaagatcccaggcc
ccgcccccacctcggcgctcgtctttttctgaggtccagagggggtcgggccgcgggtcc
cgaggacacacccgctcgttctcagacacagggatcaatcagaaactcaggaatggaggg
gccccccgaaaaatcaccataataatagaggatccggttgaagaatcgcccgttgacgaa
tgctgcttgaaggactacagccccttctctcctcagtgcagtgattccagcgatccaagt
tccctctacatggagtcttatgggtcccagtacagcagtgtgccagatgggatgttcagg
aaaccgtcagagggccagagcctcatcagctacctgtcagagcaggactttggcagctgt
gctgaccttgaaaaggaaaacgcccatttcagcatttccgagtcccttattgcagcaatc
gagttgatgaagtgcaacctgcggcgtcgggaagaggagggcgaggaggagggagacagt
gactgtgagattcagcagctcaagcagaagatccgcctacgcaggcaacagatccgtcac
agccgcctgccaccctgcacaacctcccaccccattattcactccactgacagtggaggc
tccaggaggagctctcaggactcctaccagggcctgtcggactcgggctcagctgaggag
gtggaggagtgcgaactaagagatggctgcgagggtcagtccctgctggcggtgtctcag
aacggcctctccctgtcactcgcctccctcttctcagatgcagacataaagcgcagtgtg
agcagcagatcttttctcagctcagagtccatctctccatccttccttcagtctaactct
gctgagtcagtagccatgggtttgctcaggcagtttgagggcatgcagcttcctgctgcc
tcggagctggactggctggtcccagaacacgacgctccacagaagctgctgcccatccct
gactctctcccgatctcacctgacgatggtgaacacgcagacatctacaagctgaggatt
cgtgtccgaggcaacctcgagtgggcaccgccgcgaccgcagatcatcttcaacatccac
cctgcccccaagaagaagatagttgtggctaaacagaactaccgctgcgctggctgtggc
acccgcatcgacccagactatattaagcgactgcgttactgtgagtacctcggccgttac
ttctgtcagtgctgccatgagaacgcccaggcggtggttcccggtcgagtgctgaggaag
tgggacttcagcaagtactacgtcagcaactttgcccgtgaccttctgagcaagattgct
ggagacccactgttcaaccctaatgacatcaacagcggcctctacaagaaggttaaacct
ctggaggctgtacgggttttgagggtgcagctgttccacatgaaaaatctcttcaagacc
tgtcgctttgctaaaggggtgctggaccacttcgacagcctgccaggtcacctgactgag
gaccttcacctcttctccctcaatgacctcagtgctgtgcgcaacggagaactggccccc
cggatgaaagagctgattaaacttggtaccgtgcacgtagatggttgtgtgctttgccag
gcgaagggttttgtgtgcgagttctgcggcaacgacaaagacatcatcttcccctttcag
ctgaacaagtgccagcgctgcgaagagtgtcatgcgtgttaccatcgaaactgcttccgg
gcgggtaaagaatgccctcgatgtctgcggctggcggagcggagagagaggatggcacgg
aaaaacatggaggaacaagaagacgagggaggagggacctag
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