Hippoglossus hippoglossus (Atlantic halibut): 117760077
Help
Entry
117760077 CDS
T07778
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117760077 (chd1l)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117760077 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117760077
NCBI-ProteinID:
XP_034438707
LinkDB
All DBs
Position
4:complement(6432396..6445368)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSDILLRIKSSVPEKKKKTPLSQCELQRCGLRGIQLRSYQLDGVQWLTQCLQGQEGCILG
DEMGLGKTCQTISLLVYMSGALGNQGPFLVLSPLSVLENWKEELERFAPSLTVLCYKGDK
ERRAELQRGTKTQDFHVLLTTYELCLKDASFLKRWKWKVLVVDEAHRLKNQNSLLHTTLT
KFSVEFRVLLTGTPIQNNLQEIYSLLTFIQPSIFTAEEVDVFVKSYSNVLHQPALAAELQ
SVLEPFLLRRVKSEVAVDLPKKTELLMYHGMSALQKKCYRAILMKDLEAFENEQGNKNRL
INILMNLRKCVDHPYLFDGLEPEPFEMGEHLIEASGKLCLLDSMLTYLHNGGHRILLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAVKNFSSKDIFIFLLSTKAGGVGMNLT
AADTVIFMDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARHTVEELMYSRAVSKLHLTK
AVIEGGRFSLLDQVQSAAAGLKLSEIVKFGVDKLLSTEESSVQDVKLKKILGPTRSGQWV
DDEDSTALKEDEEEEEDDGRSSEFDGQNHMYYFEGKDYSKLPSADDHNSFERLMEEQQAE
FERTAGEGRALRRKTGALLSVALGIPTRKRKTLTEAELELRVQRRQEAAAKRAKVQQDMK
KQQQKEKYKKKMAWWESSGYRSLCLQSVDSEEEEEEEEEEEEDDASLCSTDSDSTAIHYV
LGDVTHPHAAQGDAIIVHCVDDSGWWGKGGLFTALELRSDEPRKRYELAGKMKDLDIGNV
LLFPIDDKQSRLDGQDQLALIVSQQRDKANNLSGILLTALDEGLKKIYAAAKRLKASVHL
PRIGHSTKGFNWYGTERLIRKHLASRGIPTFIYYHSRASKNTATPQPSTSATLTSTSCPE
PKLCNPNRLTSETEADTPGPSAPVGSPGPTDLPSFMSGVHVFFYNLPASERKRLARYLFT
YDGDEEDMMSPEVTHIVAEVENSIHSKELQDLVRQYTQAVPVQKAWLDSCFSKQRKVNTE
QFTHLLR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatcttgttgaggattaaatccagcgtgccggagaagaagaagaagactcct
ctgtcccagtgtgagctgcagaggtgcgggttaagagggatccagttgaggagctaccag
ctggacggagtgcagtggctgacccagtgtctgcaaggccaggagggatgcatcctggga
gatgagatgggtttgggtaaaacctgtcagacgatctctctgctggtgtacatgtcagga
gctcttggtaatcaaggtccgtttttagtcctgagcccactctctgtcctggagaactgg
aaagaagagctggaacgcttcgccccctctctgactgtgctgtgttacaagggcgacaaa
gagagacgagcggagcttcagagaggaacaaagacacaggacttccatgttcttctcaca
acatatgagctgtgtctcaaagatgcctcattcctgaaacggtggaagtggaaggtgctc
gtggtagacgaagctcatcgattaaagaatcagaactcactattgcacacaaccctgaca
aagttttcagtggagttcagagtcctgctgacaggaacgcccattcagaacaacctgcag
gagatctactccctgctgaccttcattcagcccagcatcttcaccgctgaggaggttgat
gtcttcgtcaagtcttactcaaatgtactacatcagcctgctcttgctgctgagctgcag
agtgtcctggagcctttcctgcttcgtagagtcaagtccgaggtcgctgtcgatctgccg
aagaagacggagctgctgatgtaccatggcatgtcggcgctgcagaagaaatgctacaga
gccattctgatgaaggacctggaggcttttgaaaatgaacaaggaaacaagaaccggctc
attaacatcttgatgaacctgagaaagtgtgtggaccacccgtacctgtttgatgggctg
gagcctgagccttttgagatgggagagcatcttatcgaagccagtgggaagctttgcctc
ctggacagcatgctgacctacctacacaatggaggccatcggatcctgctgttctctcag
atgaccaggatgctggatattcttcaggattacctggagtacagaggttacagctatgaa
cgtctggatgggtccgtccgaggggaagaacgaaatctggcagtgaagaactttagcagc
aaagatatatttatcttcctcctcagcactaaagcagggggagtgggcatgaaccttaca
gctgctgacacagttattttcatggatagtgacttcaaccctcaaaacgacctgcaggct
gcggctcgctgccatcggattggtcagaacagacctgtgaaagtgatccgccttctggca
agacacactgtggaggaattaatgtactctcgagccgtgtccaagctgcacctcaccaag
gctgtcattgaaggaggtcgcttctccttactggatcaagttcagtcagccgctgcagga
ctcaagctcagtgagatcgtgaagtttggggtagataagcttctgtcaacagaagagagc
tctgtacaggatgtgaaactcaagaaaatcctcggtccaacgcgcagcggccagtgggtg
gatgatgaagactccaccgcgctcaaagaagatgaagaagaggaggaggatgatggcaga
agctctgaatttgacggacagaaccacatgtactactttgaggggaaagactacagtaag
ctgcccagcgctgatgaccacaacagctttgaacgtttgatggaggagcagcaggctgag
tttgagagaactgcgggagagggacgagctctgcgacgcaaaactggagctttactctca
gtagctcttgggattccaacaaggaagaggaaaactctgactgaggctgagctggagctg
agggtgcagaggaggcaggaggctgcagccaagagagccaaagttcagcaggatatgaag
aaacaacagcaaaaggaaaaatacaagaaaaaaatggcatggtgggagtcgtctggctac
agatcactgtgcctgcagtctgtggacagtgaagaagaggaggaggaggaagaggaggag
gaggaggatgatgccagcttatgttccacagactctgacagcacggctatccactatgtt
ctgggggatgttactcatccacatgctgctcagggagacgccatcattgtccactgtgtt
gatgactcagggtggtggggcaagggaggcttgtttaccgctctggagctgagatctgat
gaaccacggaagcggtatgagttggcaggcaagatgaaggatttggatattggcaacgtt
ctgctcttccccatcgatgacaaacagtccagattggacggccaggatcaattggccctg
atagtgtcacagcagagagacaaagccaacaacttgtctgggatcctcctgacggctctg
gacgaaggtctgaagaagatttatgctgcagccaaaagactcaaggcaagcgttcatctt
cctcgcatcggtcactccaccaaagggttcaactggtacggcacggagcgactcatccgg
aaacacttggcctccaggggcatccccacgttcatatactatcacagcagagcttccaag
aataccgctacacctcagccatccacctctgccaccttgacatcgacatcctgccctgaa
ccaaagctgtgtaaccccaacaggttgactagtgaaacagaagcagacactcctggcccc
tcagctcctgttgggagccccggccccacagatctccccagtttcatgtcgggagtccat
gtgtttttctacaacctccctgcatcagagagaaagaggctggcccggtaccttttcact
tatgatggcgatgaggaggatatgatgagtccagaggtcactcacatagttgcagaggtg
gagaatagcatccactcaaaggagctccaggatctggtgcgtcagtacacgcaggcggtg
cccgtgcagaaggcttggctggactcctgcttctccaaacaacgaaaagtcaacactgag
cagttcacacacctgctcagataa
DBGET
integrated database retrieval system
