Hippoglossus hippoglossus (Atlantic halibut): 117760126
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Entry
117760126 CDS
T07778
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117760126 (sox2)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117760126 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117760126
NCBI-ProteinID:
XP_034438802
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All DBs
Position
4:complement(23843941..23846332)
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AA seq
322 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGSGVGVGVGSGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQL
SYQHPGLNAHNAGQMQSMHRYDMSALQYNTMASSQSYMNGSPTYSMSYSQQSTPGMTTLG
SMGPSSVVKSESSSSSPPVVTSSSHRAAPGCQGGDLRDMISMYLPGAEVSEQTAQTRLHM
SGHYQSAVPGTTINGTLPLTHM
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccccctgctccccagaccaacacggggggc
acgggcaacaccaacacgtccggcactggccccaaccagaaaaacagtccggagcgcgta
aagagacccatgaacgcgttcatggtgtggtcccgaggccagaggaggaagatggcccag
gagaaccccaaaatgcacaactcggagataagcaagaggctgggcgccgagtggaaactt
ctgtctgagagcgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcatccggattacaaataccggccccggaggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggcgggctgctggctccgggaggcaacgggatggggtct
ggggtcggtgtcggggtgggctcgggtctgggcggcggtgtgaaccagcggatggacagc
tacgcggcgcacatgaacggctggaccaacggcggctacggcatgatgcaggaccagctg
agctaccagcacccggggctgaacgcgcacaacgcgggccagatgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatggccagctcccagagctacatgaacggc
tccccgacctactccatgtcctattcccagcagtccacgccggggatgactaccctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcgtcgtcccaccgggccgctccgggctgccaaggcggggacctgagggacatgatc
agcatgtacctgcccggggcggaggtcagcgagcagaccgcccagacccggctacacatg
tccgggcactaccagagcgccgtgcccgggacgacgatcaacggcacgctgccgttaaca
cacatgtaa
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