Hippoglossus hippoglossus (Atlantic halibut): 117760173
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Entry
117760173 CDS
T07778
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04010
MAPK signaling pathway
hhip04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117760173
04020 Calcium signaling pathway
117760173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117760173
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117760173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117760173
NCBI-ProteinID:
XP_034438880
LinkDB
All DBs
Position
4:complement(13881795..13970006)
Genome browser
AA seq
2544 aa
AA seq
DB search
MLELGSYPVSSQSLTGDHNALGLPRVPGGPDCPVGGVGMGAIRGSSTPRHNILHPSPSDC
EGWQKHRAGLARGSSLYSESHSLLEPQSLSTSYDTLYLPHMSGHAPPLHPNRLGLCLDVA
STFDVGGGMLGVDGDLAVSPNVIKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWEMAR
FGDDVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKR
LEKTEPYFIGMFCFEAGIKVIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGKLHYTCKPQSGILENETVDSSEYEFPCGVRQCPSKYSCHGTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPSWNWIYFVPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNTGPSALDALRSLPEWST
GGAYAVLKRATTIKRRGVDVVHRGQPGEEQYGDISSVGVPMARPSIRSVKRGPAAYFRRK
ERLLRISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPLWLSTFLYYAEFLFLALFLT
EMFLKMYSLGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFK
ITKYWASLRNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDT
FPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHR
SRPTYSCSLEEAQGSIREGRPPPPLNPSNSFMSRGERRKRMTMSVWEQRTSQLRRHRQMS
SREILFSGPSEEKDGPPASAQAQLGHPLSLHRKAMQNTPSGSLKRPADPLASPAKNQATS
MSVDKPLGADLSGDIPETPITVPESLDPTNEPLPDASVSLTIQEPSESETVSESKTLGVN
QSHNTFSERRSPRLNGDRQHRAVKKFRPPDNIDMLTPEMGGLSGIRARRAAHHGDHKSGA
KSRGSSPENESHLASRSVSRERKRNPRKVEEKEVETKKEEEEVVSKPEESRQVEGEEGDI
NPPDDQQSSTGDPCPQKQDELLQQSDPSPPAVPEDDKEEKEAEQEEDKSQLSSTVVIEMP
SATLCLELSTITVNSKDPEICKSEKEEAEATNPVNTVTPNSMFIFKPDNPVRRACHYVVN
LRYFEMSILLVIAASSIALAAEDPVATSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLI
LHDGSYFRDLWNVLDFIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKR
LPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQG
YYIDYGKDKKEVKRRDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGP
SHGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAI
GAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLK
HLNTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQSIDTFNMSF
LKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKL
NEETHINQHNNFKSFSCALMLLFRSATGESWQEIMLSCLGGRQCEADPSLTSEQEGGCGS
DFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAAC
GRIHYTDMYEMLTHMSPPLGLGKKCPSKVAYKRLVLMNMPVDDDMSVHFTSTLMALIRTA
LEVKIARGGEDRNQMDLDLQKEISVIWPHLSQKSLDLLVPIHKASDMTIGKIYAAMMIMD
YYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCNAKSLSFLRHGAGSALRGGFVAL
SPISPQEMFLQPLSRSREEKEEEEGDDDYRSPYLPYLHPHHHHHHHLHTLVQDVVEYKQV
IQQARQDPTVVKSPQRTASIRASSMPRLAVDPQPGLSADSKLMKRSFSTIGDQCVNGLWQ
EQHSLERVSPDDTYRPRQRSYRGARVNHREASSHERGRSKERRHLLSPDVSRCNSEERSQ
DASCERRRSRSPSEGRTQRQVNTSGSPAHSASESTTPRNRRQLPQTPSRPRPYISYSPLV
CQAQTSPTPAAPSEGQTQAQDAPVGSAEPSWKADKEAGPPAANQGSSGGQVLAQSHPSPH
RYISEPYLPYHEDLGSGEAGDRQHTLTFETAMATSLGRANAISSAPQLRHSWQVPNGHFR
KPLGNTSPAGASELLSDTDEDDRC
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcctatccggtcagctctcagtctctgacaggggaccacaatgct
ttagggctacctagagtgccaggagggccagactgtccagtggggggtgtgggcatgggg
gcgattcgtggtagcagtaccccgagacacaatatcctccacccgtccccatcggactgt
gagggctggcagaagcatcgtgccggactggccagagggtcaagtctgtattctgagtcc
cactctctcctggagccccaaagtctctcaaccagctatgacacgctttacctcccacat
atgtctggacacgctccccctctgcacccaaaccgtctgggcctctgtcttgatgtggcc
tcgacttttgacgttggaggggggatgctgggggtggatggagatttggcggtgagtccc
aatgtgatcaagagacgtcggggcggcctgatcgagcagagggacattgtaaaagcccac
caggctcataagatccacagcacaccacaggcacgacgcaaggagtgggaaatggccaga
tttggagacgacgttcctggcttgttgagctcaggggatggagggtccgagcgcaaccgg
aaccgcgatggggcggcggtgtccacaggtggcatctccccagccttcaagcagaccaaa
gcgcagcgcgcccgcaccatggccttgtacaaccccatcccggtcagggagaactgcttc
accgtcaacaggtccctgttcatctttggcgaggacaacgtggtcaggaagtacgccaag
aaaatcattgagtggcctccattcgagtacatgatcctcgccaccataatcgccaactgt
atcgtcctggctctggagcagcacctccctggagaggacaaaacacccatgtccaagaga
ttggagaagacagagccctacttcatcgggatgttctgttttgaggccggaataaaggtc
atcgccctgggctttgtatttcataaaggttcctacctcaggaatggatggaacgtcatg
gacttcatcgtggttctcagtgggatcctggctgcggcaggggcacatatgaacatctca
gtggacctgaggacgctgagggcggtgcgagtgcttcgacccctcaagctggtttcaggc
atccccagtctgcagattgtcctgaagtcaataatgaaggccatggtccctctgctgcag
atcggcctgcttctgttttttgccatactcatgttcgccatcatcggcctggagttttac
agcggcaaactgcactacacctgcaaaccacagtctggaatactggaaaacgagacagtg
gactcctctgagtatgagttcccgtgtggtgtgcggcagtgtccgtccaaatactcctgc
cacggcacctggatcggccctaatgacggcatcacccagtttgacaacatcctgtttgcc
gtcctcactgtcttccagtgcatcaccatggagggatggaccactgtcctctacaatact
gacgatgccttgggccccagctggaactggatctacttcgtccctctcatcatcatcggc
tccttttttgtcctgaacctggtgctaggagtcctctctggggaatttgccaaggagaga
gagcgggtggaaaaccgcagggccttcatgaaactgagacgccagcagcagattgagaga
gagctcaatggttaccgggcctggatcgacagagcagaggaggtgatgcttgcggaggag
aataagaatacaggaccctctgctctcgatgctctcaggagtctgccagagtggagtaca
ggtggtgcctatgcagtgctgaagagagccaccaccatcaagaggagaggcgtggatgtg
gtgcatcgagggcaaccaggggaagagcaatatggtgacatctcctctgtgggcgtcccc
atggccagaccgagtatcaggagcgtcaagcgaggtccggcagcctattttcggcggaag
gagcgtctccttcgcatctccatccgccgcgtggtgaagacacacaccttctattggacg
gtgcttggcctagtggccctcaacacactttgtgtggctatagttcaccacaaccagcct
ctctggctgtccaccttcctctactatgcagagttcctgttcctcgctctgttcctgact
gagatgttcctgaagatgtacagcctgggaccacgtctctacttccactcctcctttaac
tgctttgactgcagcgtaattgttggcagcatctttgaggtgctctggggtttcttcagg
cctggaacttcattcggcatcagtgtcctgcgtgctctccgtctgctgaggatcttcaag
atcaccaagtattgggcgtctctgagaaacctggtggtctctctgatgaactccatgaag
tccatcatctccctcattttccttctcttcctcttcatccttgtgtttgcgctcctgggt
atgcagctcttcggtggcaggttcatctttgaggactacaccccgacaaactttgacacc
tttcccgccgccatcatgaccgtctttcagatcctgactggagaggactggaatgaggtt
atgtacaacggtattcgctctcaaggaggagtgaagtctggcatgtggtcctccatctac
tttattgtgctcacattgtttggaaactacactctgctgaatgtcttcttggccatcgct
gtcgataatcttgccaatgcacaagaactcaccaaggatgaagaggaagcagaggcagcg
ttcaaccagaagcacgctctccagaaagccaaggaggtcgggccgttgtcctcctttatg
tcctcagagggaagccgtaggaggcggccctacctgtacaggaaaagagcaatccaccgc
agccgccccacctactcctgctccctggaggaggcgcagggcagcatcagggagggccgc
ccacccccaccactcaatccctctaactctttcatgtccaggggagagaggagaaaaagg
atgaccatgtcagtttgggagcagaggaccagccagctgcggagacaccggcagatgtcc
agccgagagatcctgttcagcggccccagcgaggagaaggacgggcctcctgcctcagcc
caggcccagctcggacacccactgtcgctgcaccgcaaggccatgcagaatacgccgtct
gggagtttgaaacgcccggcagatcccttagcatcaccagccaagaaccaggctacctcc
atgtctgtggataagcctcttggagccgacctctctggtgacatacctgaaacccccatc
acggtccccgagtcactggaccccacaaatgagcctctgcctgatgcctctgtgtctctg
accatacaagagccttcagaatcagagaccgtctctgagagtaaaacactgggtgttaat
cagagtcacaacaccttcagcgagcgcaggagccccagattgaatggtgatcgccagcac
agggcagtgaagaagttcagaccaccagataacattgacatgctgactcctgagatggga
ggtcttagcgggatcagggccaggagggcggcgcatcacggtgaccataagagtggagcc
aaaagtcgggggtcatctcccgagaacgaaagccatttggcaagtcgctcggtcagcaga
gagaggaagagaaaccccaggaaagtagaggagaaggaggtggagaccaaaaaggaggag
gaggaggtggtgtccaaacctgaggagagcagacaggttgaaggggaagaaggagacata
aaccccccagatgaccagcagagcagcaccggtgacccgtgtcctcagaagcaagacgag
cttctccagcaatcagacccttctccaccggccgtcccagaggacgacaaagaagagaag
gaggcagagcaggaagaggacaaatctcagctcagctccactgtcgtcatcgagatgccc
agtgcaactttatgtctggagctctctacaatcacagtgaacagcaaggatcctgaaatc
tgtaagtcagagaaggaggaggccgaggccacaaatcctgtcaacactgtgactccaaac
agcatgttcatcttcaaacctgacaacccggtgcgtcgagcatgtcactacgtggtgaac
ctcaggtactttgaaatgtccatcctgctggtcatagctgccagtagtatagctctggct
gctgaggaccctgtggctacctcctctgactggaataaggttctgcgttattttgattat
gtttttactggagtcttcacatttgaaatgataattaagatgattgaccagggtctgatc
ctccatgacggctcctacttcagagatctgtggaacgtcctggacttcatcgtcgtggtg
ggagcactggtggccttcgccctcaccaatgtgttgggaaataacaaaggacgggacata
aaaaccatcaaatctctgcgagtgttgcgtgtcctcagacccctgaagaccatcaagaga
cttcctaaactcaaggcggtctttgactgcgtggtgacgtctctgaagaacgtcttcaac
attctcattgtctacaaactttttatgttcatctttgccgtcatcgctgtgcagctcttt
aaagggaagtttttctactgtactgacagttcgaaggacacggagaaggactgccagggt
tactacatcgactacgggaaggacaagaaagaggtgaagagaagagactggaagagacac
gagtttcactacgacaacgtcatctgggctctgctcaccctcttcactgtttccactgga
gagggatggcctcaggtcctgcagcattcagtggatgtgaccgaggaggacagagggcca
agccacggcaacaggatggagatgtcaatcttctacgtcatttactttgtcgtcttccct
ttcttcttcgtcaacatcttcgtggctctcatcatcatcaccttccaggagcagggggat
aagatgatggaggagtgcagcctggagaagaacgagagggcgtgcatagactttgcaatc
ggcgccaagcccctgacccgttacatgccgcagaaccgtcacacgttccagtaccgtctc
tggcattttgtggtgtccccctcttttgagtacactgtcctggccatgatcgctctcaac
accattgtgctgatgatgaagtattactctgcaccgccggcgtacgaggccgtgctgaag
cacctgaacacagccttcaccgttctcttctctgtcgagtgtgtcctcaagatcatggcc
tttggctttctgaactactttcgagacacgtggaacatttttgactttatcaccgtcttg
ggcagcatcactgagattgtggtggacctgcagtctattgacacgttcaacatgagtttc
ctgaagctgttccgagctgctcgtctgatcaagctgctgagacaaggctacaccatccgg
attcttctgtggacctttgtccagtccttcaaagccttgccctacgtctgcctgctcatc
gccatgctcttcttcatctacgccataattggcatgcaggtgtttgggaacattaagctg
aacgaggagactcacatcaaccagcacaacaacttcaagtccttcagttgtgctctgatg
ctgctcttcaggagtgccacgggggaatcatggcaggagatcatgttgtcgtgcctgggg
gggcggcagtgcgaggcggacccttctctcacgtcagagcaggagggcggctgcggctct
gactttgcctatttctactttgtctccttcatcttcttcagttccttcctgatgctgaac
ctctttgtggctgtgatcatggataactttgagtatctgaccagagactcctccatcctg
ggccctcaccacctggatgagttcgtccggatctggggggagtatgatcgtgctgcctgt
ggtcgtatccattacacagacatgtatgagatgttgacccacatgtcgccacctctaggc
ctgggcaagaaatgcccctccaaggtggcctataagagactcgtcctgatgaacatgcct
gtggacgatgacatgtccgtccacttcacctccaccctcatggccctcatccgcaccgca
ctggaagtcaagatagccagaggtggagaggacagaaaccagatggacctggacctgcag
aaggagatcagtgtcatctggcctcatctctctcagaagtcgctggacctgctggttccc
attcacaaagctagtgacatgaccatagggaagatctatgctgccatgatgatcatggac
tactacaagcagagcaaggccaagaagctccgacagcaactggaggagcagaaacacgct
cctatgttccagcgtatggatgcttcctctctgcctcaagaaatcctatgcaatgccaaa
tccctttcatttctcagacatggtgccggatctgctctcagaggaggttttgtggcgctc
agccccatctccccccaagagatgttcctgcagccgctgtctcgttcccgggaggagaag
gaggaggaggagggcgacgacgactaccgctcaccctacctcccttacctacacccacat
catcaccaccaccaccatttacacacactggtgcaggacgtagtggagtataaacaggtg
atacagcaggccaggcaggatccaacagttgttaaatcacctcagcgaacagcatcgatc
agagcgtcctccatgcccagactggctgttgatccacagcctggcttgtcagcagacagt
aagctgatgaagcgctccttctccaccatcggagaccagtgtgtgaacggcctgtggcag
gaacaacactctctggagagagtcagtccagacgacacgtaccgaccccgacagaggagc
tacagaggtgcaagagtcaaccacagagaagcaagcagtcacgagagagggaggtctaag
gaacggcgccacctactgtctcctgacgtgtcccgctgcaactctgaggagcggagccag
gacgcctcgtgtgagaggagacggtcccgctcacccagcgaaggacgcacacagagacag
gtcaacacatcaggcagccctgcccactcagcctcagagtccactactccacgtaatcga
cggcagctgccccagacgccctctcgcccgcggccttacatctcctattctcctctggtt
tgccaagcacagacctctcccacaccagcagccccctctgagggacagacccaggctcag
gacgcccctgttggctccgcagagccctcgtggaaggccgacaaggaggccgggcccccc
gctgcaaatcaggggtcatccggaggtcaggtgttagcacagagtcacccatctcctcac
cgctacatctcagagccctacctcccataccacgaggacctcggcagtggcgaggcgggc
gacaggcagcatacccttacctttgagactgccatggcgaccagcctgggacgggccaac
gctataagctccgcccctcagcttagacactcgtggcaggttcctaacgggcatttccgg
aagcccttgggcaatacgagtccggctggagccagcgagttgctaagtgacacagacgag
gacgaccgctgctaa
DBGET
integrated database retrieval system
